Aspergillus

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A Microbial Biorealm page on the genus Aspergillus

Aspergillus flavus (green mold) conidiophore. Dennis Kunkel Microscopy, Inc.

Contents

Classification

Higher order taxa:

Eukaryota; Fungi/Metazoa group; Fungi; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiales; Trichocomaceae; mitosporic Trichomaceae

Species:

Aspergillus flavus, A. terreus, A. awamori

NCBI: Taxonomy Genome

Description and Significance

Aspergillus is a member of the phylum Ascomycota. There are over 185 known species, about 20 of which are known to be harmful to humans and other animals. The most infamous species of this genus is Aspergillus flavus, which produces aflatoxin. Aflatoxin is a contaminant of nuts and grain. It is both a toxin and a carcinogen. Aspergillus carbonarius and Aspergillus ochraceus produce the toxin ochratoxin A (OTA), which contaminates grapes and coffee.

A. fumigatus is also an extremely dangerous pathogen, causing aspergillosis. A. niger is less dangerous. Although most of these organisms only cause severe illness in immunocompromised individuals, even otherwise healthy people may become infected; aspergillosis is often fatal. These illnesses are common among people who work in the farming industry, and are considered an occupational hazard. In addition, the diseases they cause, such as invasive pulmonary aspergillosis, are difficult to diagnose. Another ailment, allergic bronchopulmonary aspergillosis (ABPA), is a hypersensitivity disorder. It typically occurs in people with asthma or cystic fibrosis. Other diseases include: chronic necrotizing pulmonary aspergillosis, and allergic fungal sinusitis. These pathogens can attack any part of the body, from the sinuses to the lungs to the kidneys. Two Aspergillus species, A. flavus and A. parasiticus, are known to produce toxins only at acidic levels of pH. However, a West African strain of A. flavus actually produces less. In 2001, the Aspergillus Trust charity was formed to raise awarness for these diseases and support patients who are suffering from Aspergillus-related illnesses.

Genome Structure

Three Aspergillus genome manuscripts were published in Nature in December 2005 thus establishing Aspergillus as the leading filamentous fungal genus for comparative genomic studies. Like most major genome projects, these Aspergillus efforts were collaborations between a large sequencing centre and the respective community of scientists. The Institute for Genome Research (TIGR) worked with the Aspergillus fumigatus community. A. nidulans was sequenced at the Broad Institute. A. oryzae was sequenced in Japan at the National Institute of Advanced Industrial Science and Technology. The Joint Genome Institute ( JGI) of the Department of Energy has released sequence date for a citric acid-producing strain of A. niger. TIGR, now re-named the Venter Institute is currently spear-heading a project on the A. flavus genome. (Bennett, 2010)

Genome sizes for sequenced species of Aspergillus range from approximately 29.3 Mb for A. fumigatus to 37.1 Mb for A. oryzae while the numbers of predicted genes vary from approximately 9926 for A. fumigatus to approximately 12,071 for A. oryzae. The genome size of an enzyme producing strain of A. niger is of intermediate size at 33.9 Mb.

An interesting finding coming out of the A. flavus genome project is its close sequence similarity and genomic architecture to that of A. oryzae genome. The high genomic identity confirms the taxonomic description of A. oryzae as a domesticated member of the A. flavus-oryzae group of yellow-green aspergilli. But the two species have very different consequences for human society. A. flavus produces aflatoxin and is a pan-kingdom pathogen capable of causing serious disease in plants, insects and vertebrates. A. oryzae is less toxigenic, and is widely used in human food and beverage preparations; nevertheless, the species does produce some lesser toxins (E. Schuster et al., 1992).

DNA data permit inferences about the comparative biology of Aspergillus species so as to reconstruct possible scenarios for the evolution of mating types, secondary metabolite clusters, enzymes involved in biomass degradation and other important pathways. Comparative genomics data can be leveraged to characterize biosynthetic processes. Using microarrays and proteomics technology, expression levels are being studied. Together with advanced bioinformatics and data analysis tools, new insights are being gained into the functional properties and activities of Aspergillus fungal genomes. (Bennett, 2010)

Cell Structure and Metabolism

Lung infected with Aspergilloma. Cornell University Medical College.

While species vary in color, size, and growth rate, microscopic characteristics are fairly uniform across Aspergillus species. For example, all have hyphae that are septate and hyaline. Hyphae and conidia are separate. As is the case with other members of Ascomycota, Aspergillus produces asci within ascocarps. Aspergillus gets its name from its shape. There is a vesicle in the shape of a circle, with filamentous extensions growing out from it. This resembles the shape of an aspergillum, a device used for sprinkling holy water.

As a pathogenic, opportunistic organism, Aspergillus species obtain nutrients from a host. Non-pathogenic species, or those that have not yet found a host, obtain nutrients from soil, plant detritus, or wood.

Like other members of Ascomycota, Aspergillus species can reproduce both sexually and asexually, although asexual reproduction predominates in most species.

Ecology

Aspergillus versicolor (black mold). Dennis Kunkel Microscopy, Inc.

Aspergillus can be found almost anywhere, including soil, plant debris, wood, and both outdoor and indoor air. In addition, they are extremely resilient and occur in high numbers. Species are found in environments all over the world, though they occur most frequently during autumn and winter in the Northern Hemisphere.

Aspergillus species are sometimes used to manufacture chemical and biological products. A. niger produces most of the world's citric acid, a common preservative for foods, detergents, and industrial products. Many common foods and beverages, such as soy sauce, chocolate, soft drinks, vitamins, black tea, and fruit juice undergo a fermentation process with Aspergillus. Unfortunately, this may have negative effects on immunocompromised individuals, who are advised to stay away from food products which have undergone this process.

A non-carcinogenic, aflatoxin-free strain of Aspergillus flavus, A. flavus AF36, is used as a component of pesticides. The AF36 strain is applied to the soil and germinates, out-competing aflatoxin-producing strains of A. flavus.

References

Aspergillus Trust.

Bacchus, Shanaz. "Aspergillus flavus strain AF36 (006456) Fact Sheet." 31 May 2005. Accessed 7 July 2005.

Dennis Kunkel Microscopy, Inc.

Doctor Fungus. "Aspergillus spp." Accessed 7 July 2005.

Ehrlich, KC, BG Montalbano, and PJ Cotty. "Divergent regulation of aflatoxin production at acidic pH by two Aspergillus strains." Mycopathologia. 2005 Jun;159(4):579-81.

Filler SG, Yeaman MR, and Sheppard DC. "Tumor Necrosis Factor Inhibition and Invasive Fungal Infections." Clinical infectious diseases: an official publication of the Infectious Diseases Society of America. 2005 Aug 1;41 Suppl 3:S208-S212.

Garnacho-Montero, José, Rosario Amaya-Villar, Carlos Ortiz-Leyba, Cristóbal León, Francisco Álvarez-Lerma, Juan Nolla-Salas, José R Iruretagoyena, and Fernando Barcenilla. 2005. "Isolation of Aspergillus spp. from the respiratory tract in critically ill patients: risk factors, clinical presentation and outcome." Critical Care. 9:191-199.

Godwin, Thomas A. 1995. "Respiratory System." Cornell University Medical College. Accessed 7 July 2005.

Mold-Help.org. "Aspergillus." Accessed 6 July 2005.

Patino B, A Gonzales-Salgado, MA Gonzales-Jaen, and C Vazquez. "PCR detection assays for the ochratoxin-producing Aspergillus carbonarius and Aspergillus ochraceus species." International journal of food microbiology. 2005 Jun 17.

Porter, Caroline. "Aspergillus." Accessed 7 July 2005.

Public Health Agency of Canada. "Material Safety Data Sheet - Infectious Substances." 23 January 2001. Accessed 7 July 2005.

Taylor, John W., Joey Spatafora, and Mary Berbee. "Ascomycota." The Tree of Life Web Project. Accessed 6 July 2005.

Tillie-Leblond, I. and A.-B. Tonnel. "Allergic bronchopulmonary aspergillosis." Allergy 2005:60:1004–1013.

Volk, Tom. "Tom Volk's Fungus of the Month for February 1997." 1997. Accessed 7 July 2005.

Bennett, J. W. 2010. "An Overview of the Genus Aspergillus" From: Aspergillus: Molecular Biology and Genomics Machida and Gomi, Eds. Caister Academic Press ISBN: 978-1-904455-53-0

E. Schuster, N. Dunn-Coleman, J. Frisvad and P. van Dijck E. Schuster, N. Dunn-Coleman, J. Frisvad and P. van Dijck. 1992. "On the safety of Aspergillus oryzae: a review" (Appl. Microbiol. Biotechnol. 36:569-572.]

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