Gluconacetobacter diazotrophicus: Difference between revisions
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==Cell Structure, Metabolism and Life Cycle== | ==Cell Structure, Metabolism and Life Cycle== | ||
G. diazotrophicus reduces atmospheric Nitrogen to ammonium by a molybdenum (Mo)-dependent nitrogenase [1]. Mo-dependent nitrogenase contains Fe protein and MoFe protein [2]. The Fe protein is a homodimer that has a binding site for MgATP in each subunit. When the Fe protein is complexed with MoFe and two MgATP molecules, the MgATP is hydrolyzed to MgADP, and the MoFe protein binds the substrate for reduction [2]. The bacteria’s lack of a nitrate reductase protein suggested that nitrogen fixation would not be inhibited by feedback from nitrogen assimilation, but nitrate may inhibit the process [3,4]. Low levels of fertilizer do not inhibit nitrogen fixation, so G. diazotrophicus may be a useful supplement to ammonium based-fertilizers [1,5]. | |||
Glycolysis and the pentose phosphate pathway are found in G. diazotrophicus [6]. Its carbon sources include d-galactose, d-arabinose, d-fructose, and d-mannose [3]. The main pathway for glucose oxidation occurs in the periplasm. Pyrroloquinoline quinone-linked glucose dehydrogenase (PQQ-GDH) oxidizes glucose to gluconate extracellularly [7, 8]. The enzyme is produced to meet the energy requirements during nitrogen fixation [8]. G. diazotrophicus also uses nicotinamide adenine dinucleotide-linked glucose dehydrogenase (NAD-GDH) for intracellular glucose oxidation [9]. Levansucrase, a fructosyltransferase exoenzyme, helps G. diazotrophicus to survive in high sucrose environments by aiding in sucrose transport [10]. The enzyme acts extracellularly to hydrolyze sucrose to fructooligosaccharides and levan [10, 11]. The levan produced by the enzyme is also critical for biofilm formation by the bacteria [12, 13]. | |||
==Ecology and Pathogenesis== | ==Ecology and Pathogenesis== |
Revision as of 04:07, 28 April 2022
Classification
Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter
Species
NCBI: [1] |
Gluconacetobacter diazotrophicus
Description
Gluconacetobacter diazotrophicus is a symbiotic, plant-growth promoting bacteria. It was isolated from the roots and stems of Brazilian sugarcane plants in 1988 [1]. Upon discovery, the bacterium was named Saccharobacter nitrocaptans. Due to its acetic acid production and similarity to previously classified bacteria, however, it was later renamed to Aacetobacter diazotrophicus. Completion of 16S ribosomal RNA analysis led to a reclassification to its current designation and taxonomy [1,2,3].
G. diazotrophicus is a Gram-negative, nonspore forming and nitrogen fixing obligate aerobe [2]. The bacterium’s cells are shaped like straight rods with rounded ends and motility is provided by 1-3 lateral or peritrichous flagella. Cellular dimensions are approximately 0.7-0.9 μm x 2 μm [2]. When viewed under a microscope, cells are single, paired, or chainlike in structure. The temperature and pH growth optimums are 30°C and 5.5 respectively. The bacterium is acid-tolerant and can also both grow and fix nitrogen at pH of 3.0 and below [1,2]. Additionally, G. diazotrophicus grows optimally at a sucrose concentration of 10%, as found in its natural host, but is capable of growth at up to 30% sucrose under laboratory conditions. The bacteria has been shown to grow abundantly on other carbon substrates like D-galactose, D-fructose, and D-mannose [1].
Unlike many other bacteria that engage in symbiosis with plants, G. diazotrophicus is an endophyte and does not stimulate the production of nodules [1]. Without a host plant, the bacteria will not survive in the soil for more than two days [4]. Most host plants of G. diazotrophicus contain relatively high levels of sucrose, similar to the sugarcane on which it was discovered [5].
Significance
The ability of G. diazotrophicus to fix nitrogen and effectively promote the growth of its host plant opens the possibility for agricultural applications. Additionally, G. diazotrophicus has many other attractive characteristics. The bacteria is of monocot origin, less plant specific than other symbiotic nitrogen fixing bacteria, and does not require nodule structures for growth and nitrogen fixation [6]. Given these factors, G. diazotrophicus could be a less costly and more environmentally friendly alternative to nitrogen fertilizers that the agricultural industry currently relies on heavily [6,7]. The bacteria could be adapted to colonize other monocot plants if sucrose levels were not a limiting factor. Monocot staples in agriculture include corn, wheat, and rice. These crops account for approximately 70% of the total world crop production [8]. If nitrogen fertilizers could be supplemented or replaced by G. diazotrophicus colonization in these crops, that could lead to more sustainable and less environmentally damaging agricultural practices on a large scale [6].
Genome Structure
Describe the size and content of the genome. How many chromosomes? Circular or linear? Other interesting features? What is known about its sequence?
Cell Structure, Metabolism and Life Cycle
G. diazotrophicus reduces atmospheric Nitrogen to ammonium by a molybdenum (Mo)-dependent nitrogenase [1]. Mo-dependent nitrogenase contains Fe protein and MoFe protein [2]. The Fe protein is a homodimer that has a binding site for MgATP in each subunit. When the Fe protein is complexed with MoFe and two MgATP molecules, the MgATP is hydrolyzed to MgADP, and the MoFe protein binds the substrate for reduction [2]. The bacteria’s lack of a nitrate reductase protein suggested that nitrogen fixation would not be inhibited by feedback from nitrogen assimilation, but nitrate may inhibit the process [3,4]. Low levels of fertilizer do not inhibit nitrogen fixation, so G. diazotrophicus may be a useful supplement to ammonium based-fertilizers [1,5]. Glycolysis and the pentose phosphate pathway are found in G. diazotrophicus [6]. Its carbon sources include d-galactose, d-arabinose, d-fructose, and d-mannose [3]. The main pathway for glucose oxidation occurs in the periplasm. Pyrroloquinoline quinone-linked glucose dehydrogenase (PQQ-GDH) oxidizes glucose to gluconate extracellularly [7, 8]. The enzyme is produced to meet the energy requirements during nitrogen fixation [8]. G. diazotrophicus also uses nicotinamide adenine dinucleotide-linked glucose dehydrogenase (NAD-GDH) for intracellular glucose oxidation [9]. Levansucrase, a fructosyltransferase exoenzyme, helps G. diazotrophicus to survive in high sucrose environments by aiding in sucrose transport [10]. The enzyme acts extracellularly to hydrolyze sucrose to fructooligosaccharides and levan [10, 11]. The levan produced by the enzyme is also critical for biofilm formation by the bacteria [12, 13].
Ecology and Pathogenesis
Habitat; symbiosis; biogeochemical significance; contributions to environment.
If relevant, how does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.
References
Authors
Page authored by Isaac Coker, Kyra Colston, and Danielle DeCesaris, students of Prof. Jay Lennon at Indiana University.