Aeropyrum pernix: Difference between revisions

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==References==
==References==
[Sample reference] [http://ijs.sgmjournals.org/cgi/reprint/50/2/489 Takai, K., Sugai, A., Itoh, T., and Horikoshi, K. "''Palaeococcus ferrophilus'' gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". ''International Journal of Systematic and Evolutionary Microbiology''. 2000. Volume 50. p. 489-500.]
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?list_uids=10382966&db=PubMed&dopt=Abstract&cmd=Retrieve] Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1.


[www.ncbi.nlm.nih.gov]
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?list_uids=15848165&db=PubMed&dopt=Abstract&cmd=Retrieve] Gene expression and characterization of two 2-oxoacid:ferredoxin oxidoreductases from Aeropyrum pernix K1.


[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?list_uids=16636888&db=PubMed&dopt=Abstract&cmd=Retrieve] Identification of the first archaeal oligopeptide-binding protein from the hyperthermophile Aeropyrum pernix.


Edited by Daniel Pak, student of [mailto:ralarsen@ucsd.edu Rachel Larsen] and Kit Pogliano
Edited by Daniel Pak, student of [mailto:ralarsen@ucsd.edu Rachel Larsen] and Kit Pogliano

Revision as of 18:44, 4 June 2007

A Microbial Biorealm page on the genus Aeropyrum pernix

Classification

Higher order taxa

Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae, Desulfurococcaceae; Aeropyrum [Others may be used. Use NCBI link to find]

Species

NCBI: Taxonomy

Aeropyrum pernix

Description and significance

The Aeropyrum pernix is an aerobic archaeon and is spherical in shape with a diameter of about 1 micro meters. It grows optimally at pH 7.0 and at a temperature of 95 degrees celcius and a salinity of 3.5%. This archaeon is important enough to have its genome sequenced because it can help answer how the Aeropyrum pernix is able to consume oxygen in such an extreme environment. Only anaerobic Archaea was found in such living conditions, until the discovery of the Aeropyrum pernix. Aeropyrum pernix was isolated at a hydrothermal vent at kodakara island in Kagoshima Prefecture by a team of researchers at Kyoto University in 1993. The whole genome was sequenced by using the shotgun sequencing approach. Include a picture or two (with sources) if you can find them.

Genome structure

Describe the size and content of the genome. How many chromosomes? Circular or linear? Other interesting features? What is known about its sequence? Does it have any plasmids? Are they important to the organism's lifestyle?

Cell structure and metabolism

Describe any interesting features and/or cell structures; how it gains energy; what important molecules it produces.

Ecology

Describe any interactions with other organisms (included eukaryotes), contributions to the environment, effect on environment, etc.

Pathology

How does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.

Application to Biotechnology

Does this organism produce any useful compounds or enzymes? What are they and how are they used?

Current Research

Enter summaries of the most recent research here--at least three required

References

[1] Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1.

[2] Gene expression and characterization of two 2-oxoacid:ferredoxin oxidoreductases from Aeropyrum pernix K1.

[3] Identification of the first archaeal oligopeptide-binding protein from the hyperthermophile Aeropyrum pernix.

Edited by Daniel Pak, student of Rachel Larsen and Kit Pogliano