Ascomycota: Difference between revisions

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{{Biorealm Phylum}}
'''NCBI:<br />[http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=4890&lvl=3&lin=f&keep=1&srchmode=1&unlock Taxonomy]<br /> Genome '''
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[[Image:mor-del2-350.jpg|thumb|300px|right|''Morchella deliciosa''. [http://www.perspective.com/nature/fungi/ascomycota.html Natural Perspective by Ari Kornfeld.]]]


==Classification==
==Classification==
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===Species:===
===Species:===
[[Image:mor-del2-350.jpg|thumb|300px|right|''Morchella deliciosa''. [http://www.perspective.com/nature/fungi/ascomycota.html Natural Perspective by Ari Kornfeld.]]]


''Saccharomyces cervisae, Morchella esculentum, Penicillium chrysogenum''
''Saccharomyces cervisae, Morchella esculentum, Penicillium chrysogenum''
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'''NCBI: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=4890&lvl=3&lin=f&keep=1&srchmode=1&unlock Taxonomy] Genome '''
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==Description and Significance==
==Description and Significance==
[[Image:20100911_232323_SaccharomycesCerevisiae.jpg|thumb|300px|<br/>[[Saccharomyces cerevisiae]]<br/>Numbered ticks are 11 &micro;M apart.&nbsp; Photograph by [[User:Blaylock|Bob Blaylock]].]]
[[Image:20101121_212039_Mildew.jpg|thumb|300px|Mildew<br/>Numbered ticks are 11 &micro;M apart.<br/>Photograph by [[User:Blaylock|Bob Blaylock]].]]
Ascomycota, also known as sac fungi, is a recently discovered class. In fact, it was once classified within Deuromycota. Ascomycota is a sister group to basidomycota. This classification makes up more than 75% of fungi. It is a very general category to describe a wide number of organisms, including yeasts. There are many famous and infamous organisms: ''[[Saccharomyces]] cervisiae'' (baker's yeast), ''[[Penicillium]] chrysogenum'' (penicillin), ''[[Morchella]] esculentum'' (morels), ''[[Neurospora]] crassa'' ("one-gene-one-enzyme" organism), ''[[Aspergillus]] flavus'' (aflatoxin), ''Candid albicans'' (which causes thrush, diaper rash, and vaginitis), and ''Cryphonecrita parasitica'' (a disease affecting chestnut trees). Although morels and truffles (euascomycetes) are found here, mushrooms are rare.


Ascomycota, also known as sac fungi, is a recently discovered class. In fact, it was once classified within Deuromycota. Ascomycota is a sister group to basidomycota. This classification makes up more than 75% of fungi. It is a very general category to describe a wide number of organisms, including yeasts. There are many famous and infamous organisms: ''[[Saccharomyces]] cervisiae'' (baker's yeast), ''[[Penicillium]] chrysogenum'' (penicillin),''[[Morchella]] esculentum'' (morels), ''[[Neurospora]] crassa'' ("one-gene-one-enzyme" organism), ''[[Aspergillus]] flavus'' (aflatoxin), ''Candid albicans'' (which causes thrush, diaper rash, and vaginitis), and ''Cryphonecrita parasitica'' (a disease affecting chestnut trees). Although morels and truffels (euascomycetes) are found here, mushrooms are rare.
Ascomycota were established during the coal age, over 300 million years ago. Early fossils are not easy to recognize, because these early organisms lacked ascoma. The earliest fossils are in fact controversial because their age of deposition predates estimates of Ascomycota origin.


Ascomycota were established during the coal age, over 300 million years ago. Early fossils are not easy to recognize, because these early organisms lacked ascoma. The earliest fossiles are in fact controversial because their age of deposition predates estimates of Ascomycota origin.
Some of the most famous Ascomycota are truffles and morels. Morels camouflage easily, with black morels blending into forest landscapes and white morels within more urban locations. In addition, Ascomycota contains fake morels. Within the same order as morels are the cup fungi. Unlike morels however, these fungi often to not have stalks. The Orange Peel Fungus is an example of the cup fungi, as well as its stalked cousin, the Stalked Orange Peel Fungus. Another group is the Flash Fungi, which is known for a species called the Candlesnuff Fungus.
 
Some of the most famous Ascomycota are truffels and morels. Morels camouflage easily, with black morels blending into forest landscapes and white morels within more urban locations. In addition, Ascomycota contains fake morels. Within the same order as morels are the cup fungi. Unlike morels however, these fungi often to not have stalks. The Orange Peel Fungus is an example of the cup fungi, as well as its stalked cousin, the Stalked Orange Peel Fungus. Another group is the Flash Fungi, which is known for a species called the Candlesnuff Fungus.


==Genome Structure==
==Genome Structure==
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==Cell Structure and Metabolism==
==Cell Structure and Metabolism==


[[Image:lifecycle.2.gif|thgumb|300px|right|Diagram of life cycle. [http://tolweb.org/tree?group=Ascomycota&contgroup=Fungi#AboutThisPage Ascomycota by John W. Taylor, Joey Spatafora, and Mary Berbee.]]]
[[Image:20100815_1818_Mold.jpg|thumb|300px|The mycelium&mdash;a network of filaments called &ldquo;hyphae&rdquo;&mdash; is the primary form of a multicellular fungus.&nbsp; This image is of a mycelium growing in an agar-substitute.&nbsp; This image covers a one-millimeter square.<br/>Photograph by [[User:Blaylock|Bob Blaylock]].]]
[[Image:20100916_011605_Mycelium.jpg|thumb|300px|Another mycelium, growing in an agar-substitute.&nbsp; Numbered ticks are 230 &micro;M apart.<br/>Photograph by [[User:Blaylock|Bob Blaylock]].]]
[[Image:lifecycle.2.gif|thumb|300px|right|Diagram of life cycle. [http://tolweb.org/tree?group=Ascomycota&contgroup=Fungi#AboutThisPage Ascomycota by John W. Taylor, Joey Spatafora, and Mary Berbee.]]]


The bodies of Ascomycota are eukaryotic cells surrounded by a wall consisting of chitin and beta glucans. They can be single-celled (yeasts) or filamentous (hyphal) organisms. In addition, they can also be dimorphic. The yeasts grow by budding or fission, while hyphae branch out. Most are haploid, but some can be diploid. Spores are stored in cases (asci), which release clouds of spore smoke. Nucelar fusion and meisos take place within the ascus.
The bodies of Ascomycota are eukaryotic cells surrounded by a wall consisting of chitin and beta glucans. They can be single-celled (yeasts) or filamentous (hyphal) organisms. In addition, they can also be dimorphic. The yeasts grow by budding or fission, while hyphae branch out. Most are haploid, but some can be diploid. Spores are stored in cases (asci), which release clouds of spore smoke. Nuclear fusion and meiosis take place within the ascus.


Ascomycota are heterotrophic, obtaining nutrients from both dead or living organisms. In addition, these fungi are capable of consuming almost any liquid, as long as there is water present in it.
Ascomycota are heterotrophic, obtaining nutrients from both dead or living organisms. In addition, these fungi are capable of consuming almost any liquid, as long as there is water present in it.


Ascomycota have more than one reproductive option. Sexual reproduction takes place within ascospores or meiospores, and asexually with condia or meitospores. Some must outbreed (heterothallic), some must self breed (homothallic), and some can do both. Meitospores usually simply reproduce the parent organism, but can also act as gametes for fertilizatin. Reproduction takes place in the ascus, with one round of mitosis following meiosis. This leaves eight nuclei and eight ascospores.
Ascomycota have more than one reproductive option. Sexual reproduction takes place within ascospores or meiospores, and asexually with conidia or meitospores. Some must outbreed (heterothallic), some must self breed (homothallic), and some can do both. Meitospores usually simply reproduce the parent organism, but can also act as gametes for fertilization. Reproduction takes place in the ascus, with one round of mitosis following meiosis. This leaves eight nuclei and eight ascospores.


==Ecology==
==Ecology==


Although certain species live in very specific locations, Ascomycota can be found on all continents. They often form symbiotic relationships with algae, plant roots, and the leaves or stems of plants. However, they do not limit these relationships to plant organisms; they are also known to form them with arthropods. While Ascomycota includes many useful organisms such as fission yeast, baker's yeast, morels, and truffels, it can also account for most animal and plant pathogens. Ascomycota contains the species ''Magnaporthe grisea'', which is considered the most destructive pathogen of rice. Dean et. al. (2005) drafted a sequence of this specie's genome in an attempt to better understand its infectious qualities. Ascomycota play a large role in recycling dead plant material.
[[Image:xylaria-340.jpg|thumb|300px|right|''Xylaria hypoxylon''. [http://www.perspective.com/nature/index.html Natural Perspective by Ari Kornfeld.]]]
Although certain species live in very specific locations, Ascomycota can be found on all continents. They often form symbiotic relationships with algae, plant roots, and the leaves or stems of plants. However, they do not limit these relationships to plant organisms; they are also known to form them with arthropods. While Ascomycota includes many useful organisms such as fission yeast, baker's yeast, morels, and truffles, it can also account for most animal and plant pathogens. Ascomycota contains the species ''Magnaporthe grisea'', which is considered the most destructive pathogen of rice. Dean et. al. (2005) drafted a sequence of this specie's genome in an attempt to better understand its infectious qualities. Ascomycota play a large role in recycling dead plant material.


Many Ascomycota species are useful beyond their conventional functions. Some species, particularly yeasts, have been used in genetics research. For example, a recent experiment by Conrad et. al. (2005) used ''Saccharomyces cervisae'' to study DNA replication. Other researchers, such as R. Kellermayer (2005) have noted the ways in which ''Saccharomyces cervisae'' is useful in studying genetic mutations within the context of Hailey-Hailey disease. Cruyssen et. al. (2005) have used this species in their work on Crohn's disease.
Many Ascomycota species are useful beyond their conventional functions. Some species, particularly yeasts, have been used in genetics research. For example, a recent experiment by Conrad et. al. (2005) used ''Saccharomyces cervisae'' to study DNA replication. Other researchers, such as R. Kellermayer (2005) have noted the ways in which ''Saccharomyces cervisae'' is useful in studying genetic mutations within the context of Hailey-Hailey disease. Cruyssen et. al. (2005) have used this species in their work on Crohn's disease.
[[Image:xylaria-340.jpg|thumb|300px|right|''Xylaria hypoxylon''. [http://www.perspective.com/nature/index.html Natural Perspective by Ari Kornfeld.]


==References==
==References==

Latest revision as of 08:18, 22 November 2010

This is a curated page. Report corrections to Microbewiki.

A Microbial Biorealm page on the phylum Ascomycota

Classification

Higher order taxa:

Eukaryota; Fungi/Metazoa group; Fungi

Species:

Saccharomyces cervisae, Morchella esculentum, Penicillium chrysogenum

NCBI: Taxonomy Genome

Description and Significance


Saccharomyces cerevisiae
Numbered ticks are 11 µM apart.  Photograph by Bob Blaylock.
Mildew
Numbered ticks are 11 µM apart.
Photograph by Bob Blaylock.

Ascomycota, also known as sac fungi, is a recently discovered class. In fact, it was once classified within Deuromycota. Ascomycota is a sister group to basidomycota. This classification makes up more than 75% of fungi. It is a very general category to describe a wide number of organisms, including yeasts. There are many famous and infamous organisms: Saccharomyces cervisiae (baker's yeast), Penicillium chrysogenum (penicillin), Morchella esculentum (morels), Neurospora crassa ("one-gene-one-enzyme" organism), Aspergillus flavus (aflatoxin), Candid albicans (which causes thrush, diaper rash, and vaginitis), and Cryphonecrita parasitica (a disease affecting chestnut trees). Although morels and truffles (euascomycetes) are found here, mushrooms are rare.

Ascomycota were established during the coal age, over 300 million years ago. Early fossils are not easy to recognize, because these early organisms lacked ascoma. The earliest fossils are in fact controversial because their age of deposition predates estimates of Ascomycota origin.

Some of the most famous Ascomycota are truffles and morels. Morels camouflage easily, with black morels blending into forest landscapes and white morels within more urban locations. In addition, Ascomycota contains fake morels. Within the same order as morels are the cup fungi. Unlike morels however, these fungi often to not have stalks. The Orange Peel Fungus is an example of the cup fungi, as well as its stalked cousin, the Stalked Orange Peel Fungus. Another group is the Flash Fungi, which is known for a species called the Candlesnuff Fungus.

Genome Structure

There are numerous organisms within Ascomycota, and each species has a different genome structure.

Cell Structure and Metabolism

The mycelium—a network of filaments called “hyphae”— is the primary form of a multicellular fungus.  This image is of a mycelium growing in an agar-substitute.  This image covers a one-millimeter square.
Photograph by Bob Blaylock.
Another mycelium, growing in an agar-substitute.  Numbered ticks are 230 µM apart.
Photograph by Bob Blaylock.

The bodies of Ascomycota are eukaryotic cells surrounded by a wall consisting of chitin and beta glucans. They can be single-celled (yeasts) or filamentous (hyphal) organisms. In addition, they can also be dimorphic. The yeasts grow by budding or fission, while hyphae branch out. Most are haploid, but some can be diploid. Spores are stored in cases (asci), which release clouds of spore smoke. Nuclear fusion and meiosis take place within the ascus.

Ascomycota are heterotrophic, obtaining nutrients from both dead or living organisms. In addition, these fungi are capable of consuming almost any liquid, as long as there is water present in it.

Ascomycota have more than one reproductive option. Sexual reproduction takes place within ascospores or meiospores, and asexually with conidia or meitospores. Some must outbreed (heterothallic), some must self breed (homothallic), and some can do both. Meitospores usually simply reproduce the parent organism, but can also act as gametes for fertilization. Reproduction takes place in the ascus, with one round of mitosis following meiosis. This leaves eight nuclei and eight ascospores.

Ecology

Although certain species live in very specific locations, Ascomycota can be found on all continents. They often form symbiotic relationships with algae, plant roots, and the leaves or stems of plants. However, they do not limit these relationships to plant organisms; they are also known to form them with arthropods. While Ascomycota includes many useful organisms such as fission yeast, baker's yeast, morels, and truffles, it can also account for most animal and plant pathogens. Ascomycota contains the species Magnaporthe grisea, which is considered the most destructive pathogen of rice. Dean et. al. (2005) drafted a sequence of this specie's genome in an attempt to better understand its infectious qualities. Ascomycota play a large role in recycling dead plant material.

Many Ascomycota species are useful beyond their conventional functions. Some species, particularly yeasts, have been used in genetics research. For example, a recent experiment by Conrad et. al. (2005) used Saccharomyces cervisae to study DNA replication. Other researchers, such as R. Kellermayer (2005) have noted the ways in which Saccharomyces cervisae is useful in studying genetic mutations within the context of Hailey-Hailey disease. Cruyssen et. al. (2005) have used this species in their work on Crohn's disease.

References

Conrad A. Nieduszynski, J. Julian Blow, and Anne D. Donaldson. "The requirement of yeast replication origins for pre-replication complex proteins is modulated by transcription." Nucleic acids research. 2005 Apr 28;33(8):2410-20. Print 2005.

Cruyssen BV et. al. "CARD15 polymorphisms are associated with anti-Saccharomyces cerevisiae antibodies in caucasian Crohn's disease patients." Clinical and experimental immunology. 2005 May;140(2):354-9.

Dean RA et. al. "The genome sequence of the rice blast fungus Magnaporthe grisea." Nature. 2005 Apr 21;434(7036):980-6.

Kellermayer R. "Hailey-Hailey disease as an orthodisease of PMR1 deficiency in Saccharomyces cerevisiae." FEBS letters. 2005 Apr 11;579(10):2021-5.

Kornfeld, Ari. Natural Perspective.

Taylor, John W., Joey Spatafora and Mary Berbee. "Ascomycota: Sac Fungi." Tree of Life Web Project.