Bartonella quintana: Difference between revisions

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==Description and significance==
==Description and significance==
Describe the appearance, habitat, etc. of the organism, and why it is important enough to have its genome sequenced.  Describe how and where it was isolated.
Include a picture or two (with sources) if you can find them.


''Treponema denticola'' is a motile, slender, helically shaped flexible organism. It is made up of a periplasmic flagella wound around the helical protoplasmic cylinder and encased in an outer sheath. It's habitat is anaerobic and host-associated. It grows at an optimal temperature of 30-42°C, with a pH of 6.5-8.0. It is commonly found in the human oral cavity, specifically in subgingival dental plaque, and it is often associated with periodontal disease. Periodontal disease results in inflammation of the gum tissue, bone resorbtion, and subsequent tooth loss. Periodontal disease has now become a major concern in dentistry and 80% of adults in the USA are estimated to have had periodontal disease at some point in their lives.
Bartonella quintana was formally classified in the Rickettsiaceae family as the obligately intracellular (cannot reproduce outside the host cell) Rochalimaea quintana (28).  The difference between Rickettsia and Rochalimaea was the chemical composition in their genomic structure.  Rickettsia species have a low level of guanine and cytosine (28.5 – 33.3 mol%) but Rochalimaea and Bartonella species have a higher level (39.0 – 40.0 mol%).  The description of these species has increased by the availability of modern taxonomic methods.  Few techniques would include DNA hybridization and 16 rRNA gene sequence comparison (4). 
The complete genome of T. denticola strain 35405 was sequenced by using the random shotgun method described for genomes sequenced by The Institute for Genomic Research and it was designated as the type strain by Chan et al.
B. quintana as opposed to related species, B. bacilliformis and B. clarrideiae that posses flagella uses a twitching movement caused by fimbriae.  B.quintana is a facultative, Gram-negative bacilli belonging to 2 subgroup of proteobacteria. The dimensions of the bacterium is 0.3 – 0,5 m wide and 1-1.7 m long (7). It can be cultured in media containing blood or hemin and in a moist 5-10% carbon dioxide atmosphere at 30C to 37C (5). Because B. quintana is a slow-growing bacterium, primary isolations are available 12 to 14 days after B. quintana has been embedded and incubated in blood agar at 37C.  Unfortunately, incubation periods could last as long as 45 days that is necessary for primary isolations (3).
Humans are the reservoir of the bacterium but the mode of transmission comes directly from a human body louse, Pediculus humanus corporis (20).  During asymptomatic period, B. quintana is located in the erythrocytes and has been detected in erythroblasts at the bone marrow (12).  Also, bacillary angiomatosis infection is caused by B. quintana having an affinity for endothelial cells, leading to angioproliferative lesions (13).  
Currently, B. quintana is unique among bacterial pathogens it has reemerged as an opportunistic infectious agent primarily in immunocompromised patients, especially individuals suffering with HIV infection. It also causes a febrile disease among alcoholic individuals and the homeless populations in the cities in United States and Europe called “urban trench fever” (11).  B. quintana infections can manifest as bacillary angiomatosis, bacillary peliosis, endocarditis, and chronic bacteremia, which could be life-threatening if these conditions occurred concurrently (7).


 
Edited by Rani Thamawatankul, student of Rachel Larsen at UCSD.
Edited by Neena Patel, student of Rachel Larsen at UCSD.


==Genome structure==
==Genome structure==

Revision as of 03:36, 5 June 2007

A Microbial Biorealm page on the genus Bartonella quintana

Classification

Gram-negative rod shape

Higher order taxa

Domain:Bacteria, Phylum: Proteobacteria, Class: Alpha Proteobacteria, Order: Rhizobiales, Family: Bartonellacaea

Edited by Rani Thamawatanakul, student of Rachel Larsen at UCSD.

Genus

Genus species: Bartonella Quintana


NCBI: Taxonomy

Edited by Rani Thamawatankul, student of Rachel Larsen at UCSD.

Description and significance

Bartonella quintana was formally classified in the Rickettsiaceae family as the obligately intracellular (cannot reproduce outside the host cell) Rochalimaea quintana (28). The difference between Rickettsia and Rochalimaea was the chemical composition in their genomic structure. Rickettsia species have a low level of guanine and cytosine (28.5 – 33.3 mol%) but Rochalimaea and Bartonella species have a higher level (39.0 – 40.0 mol%). The description of these species has increased by the availability of modern taxonomic methods. Few techniques would include DNA hybridization and 16 rRNA gene sequence comparison (4). B. quintana as opposed to related species, B. bacilliformis and B. clarrideiae that posses flagella uses a twitching movement caused by fimbriae. B.quintana is a facultative, Gram-negative bacilli belonging to 2 subgroup of proteobacteria. The dimensions of the bacterium is 0.3 – 0,5 m wide and 1-1.7 m long (7). It can be cultured in media containing blood or hemin and in a moist 5-10% carbon dioxide atmosphere at 30C to 37C (5). Because B. quintana is a slow-growing bacterium, primary isolations are available 12 to 14 days after B. quintana has been embedded and incubated in blood agar at 37C. Unfortunately, incubation periods could last as long as 45 days that is necessary for primary isolations (3). Humans are the reservoir of the bacterium but the mode of transmission comes directly from a human body louse, Pediculus humanus corporis (20). During asymptomatic period, B. quintana is located in the erythrocytes and has been detected in erythroblasts at the bone marrow (12). Also, bacillary angiomatosis infection is caused by B. quintana having an affinity for endothelial cells, leading to angioproliferative lesions (13). Currently, B. quintana is unique among bacterial pathogens it has reemerged as an opportunistic infectious agent primarily in immunocompromised patients, especially individuals suffering with HIV infection. It also causes a febrile disease among alcoholic individuals and the homeless populations in the cities in United States and Europe called “urban trench fever” (11). B. quintana infections can manifest as bacillary angiomatosis, bacillary peliosis, endocarditis, and chronic bacteremia, which could be life-threatening if these conditions occurred concurrently (7).

Edited by Rani Thamawatankul, student of Rachel Larsen at UCSD.

Genome structure

Describe the size and content of the genome. How many chromosomes? Circular or linear? Other interesting features? What is known about its sequence? Does it have any plasmids? Are they important to the organism's lifestyle?


Treponema denticola ATCC 35405 has a complete genome. It is made up of dsDNA and 1 chromosome. It is circular and the length is 2,843,201 nucleotides. The GC content is 37%. It has 2838 genes. Replicon Type: chromosome.

Edited by Neena Patel, student of Rachel Larsen at UCSD.

Cell structure and metabolism

Describe any interesting features and/or cell structures; how it gains energy; what important molecules it produces.

The genome reveals factors mediating coaggregation, cell signaling, and stress protection. It has a spiral shape and is arranged in singles. It is a mobile organism but does not contain any endospores. Motility is by rapid rotation around the long axis, flexation of the cell and locomotion along a helical path. The most distinctive property is the presence of periplasmic flagella wound around the helical protoplasmic cylinder and encased in an outer sheath.

Edited by Neena Patel, student of Rachel Larsen at UCSD.

Ecology

Describe any interactions with other organisms (included eukaryotes), contributions to the environment, effect on environment, etc.

Pathology

Treponema denticola is a bacterial pathogen and plant plastid. It causes periodontal disease and gum inflammation.


How does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.

Edited by Neena Patel, student of Rachel Larsen at UCSD.

Application to Biotechnology

Does this organism produce any useful compounds or enzymes? What are they and how are they used?

Current Research

Enter summaries of the most recent research here--at least three required

References

example:

Glockner, F. O., M. Kube, M. Bauer, H. Teeling, T. Lombardot, W. Ludwig, D. Gade, A. Beck, K Borzym, K Heitmann, R. Rabus, H. Schlesner, R. Amann, and R. Reinhardt. 2003. "Complete genome sequence of the marine planctomycete Pirellula sp. strain 1." Proceedings of the National Acedemy of Sciences, vol. 100, no. 14. (8298-8303)


Edited by student of Rachel Larsen and Kit Pogliano