Difference between revisions of "Caulimovirus"

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{{Curated}}
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{{Viral Biorealm Genus}}
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[[Image:Caulimovirus.jpeg|thumb|right|Electron Micrograph of Caulimovirus.
 
[[Image:Caulimovirus.jpeg|thumb|right|Electron Micrograph of Caulimovirus.
  
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===Higher order taxa===
 
===Higher order taxa===
  
Viruses; Retro-transcribing viruses; [[Caulimoviridae]]; ''Caulimovirus''
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Virus; Retro-transcribing viruses; [[Caulimoviridae]]; ''Caulimovirus''
  
 
===Species===
 
===Species===
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==Description and Significance==
 
==Description and Significance==
  
The cauliflower mosaic virus and related caulimoviridae viruses infect crucifers, groundnuts, soybeans, and cassava. The cauliflower mosaic virus promoter sequence is used to construct vectors to put genes into transgenic plants. When the virus attacks the host, signs and symptoms may persist or vary seasonally.
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''Cauliflower mosaic virus'', in the genus ''Caulimovirus'' of the family [[Caulimoviridae]], was the first plant virus discovered to use DNA instead of RNA as its genetic material.  Members of this genus are plant pararetroviruses, meaning they use reverse transcription of an RNA intermediate in order to replicate.  (sources: Haas et al., Mushegian et al.)
  
 
==Genome Structure==
 
==Genome Structure==
  
The genome contains a single molecule of circular and is not segmented. The genome is made of a double stranded DNA and is -RT. Virions do not contain minor species of non-genomic nucleic acid. The complete genome is about 8000 nucleotides long. The genome is sequenced but only an estimate is available. The complete sequence is 6800-7771-8175 nucleotides long.
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The genome contains a single molecule of circular and is not segmented. The genome is made of a double stranded DNA and is -RT. Virions do not contain minor species of non-genomic nucleic acid. The complete genome is sequenced, but can only be estimated at about 8000 nucleotides long. It has single-stranded discontinuities at specific sites and the transcribed strand has at least one discontinuity while the non-trnascribed strand has two discontinuities. The genome may have an intergenic poly (A) region. Members of this genus have 6 or 7 open reading frames (ORFs); viruses in the Caulimoviridae family with either more or fewer ORFs have been reclassified into other genera in the family (sources: [http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/00.015.0.01.htm ICTVdB], [http://www.dpvweb.net/notes/showgenus.php?genus=Caulimovirus Descriptions of Plant Viruses])
 
 
The genome has a guanine + cytosine content of 28-35.5-43 %. It has single-stranded discontinuities at specific sites and the transcribed strand has at least one discontinuity while the non-trnascribed strand has two discontinuities. The genome may have an intergenic poly (A) region. (source: [http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/00.015.0.01.htm ICTV dB Descriptions])
 
  
 
==Virion Structure of a Caulimovirus==
 
==Virion Structure of a Caulimovirus==
  
The virions of a caulimovirus consist of a capsid that is not envelped but round with icosahedral symmetry (T=7).  The isometric capsid has a diameter of 35-47.52-50 nm. The capsid shells of virions are composed of multiple layers. The capsids appear round or hexagonal in outline. The capsomer arrangement may be clearly visible or not so obvious. (source: [http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/00.015.0.01.htm ICTV dB Descriptions])
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The virions of a caulimovirus consist of a round, non-enveloped capsid that has icosahedral symmetry (T=7).  The isometric capsid is 35-47.52-50 nm in diameter. The capsid shells of the caulimovirus virions are composed of multiple layers. The capsids appear round or hexagonal in outline. The capsomer arrangement may be clearly visible or not so obvious. (source: [http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/00.015.0.01.htm ICTVdB], Mushegian et al.)
  
 
==Reproduction Cycle of a Caulimovirus in a Host Cell==
 
==Reproduction Cycle of a Caulimovirus in a Host Cell==
  
The genome of caulivirus replicates in the nucleus or the cytoplasm and involves a reverse transcription step. The virus codes for 7ORFs. Sub-genomic RNA is present in infected cells.
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Replication involves the reverse transcription of an RNA intermediate. (source: Mushegian et al.)
  
 
==Viral Ecology & Pathology==
 
==Viral Ecology & Pathology==
  
Caulimoviruses may be transmitted by a vector, mechanical inoculation, grafting or contact between hosts. Caulimovirus is not transmitted by seeds or pollen.  
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Caulimoviruses may be transmitted by a vector, mechanical inoculation, grafting or contact between hosts. Caulimoviruses are not transmitted by seeds or pollen. Vector transmission is conducted by insects of the order Hemiptera, family Aphididae. The virus is transmitted in a semi-persistent or non-persistent manner. The vector looses the virus when it moults. The virus does not replicate in the vector and is not transmitted congenitally to the progeny of the vector. (source: [http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/00.015.0.01.htm ICTVdB])
 
 
As regards vector transmission, the virus is trasmitted by insects of the order Hemiptera, family Aphididae. The virus is transmitted in a semi-persistent or non-persistent manner. The vector looses the virus when it moults. The virus does not replicate in the vector and is not transmitted congenitally to the progeny of the vector. (source: [http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/00.015.0.01.htm ICTV dB Descriptions])
 
 
   
 
   
 
==References==
 
==References==
  
[http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/00.015.0.01.htm ICTV dB Descriptions]
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[http://www.dpvweb.net/notes/showgenus.php?genus=Caulimovirus Descriptions of Plant Viruses: Notes on Genus: Caulimovirus.]
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Haas et al.  "Cauliflower mosaic virus : still in the news."  ''Molecular Plant Pathology'' 3.6 (2002): 419-429.
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[http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/00.015.0.01.htm ICTVdB - The Universal Virus Database, version 4. http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/]
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Mushegian et al.  "Molecular Analysis of the Essential and Nonessential Genetic Elements in the Genome of Peanut Chlorotic Streak Caulimovirus."  ''Virology'' 206.2 (1995): 823-834.

Latest revision as of 00:23, 8 August 2010

This is a curated page. Report corrections to Microbewiki.

A Viral Biorealm page on the genus Caulimovirus

Electron Micrograph of Caulimovirus. Copyright notice: This notice must accompany any copy of the images. The images must not be used for commercial purpose without the consent of the copyright owners. The images are not in the public domain. The images can be freely used for educational purposes. (Copyright) 1994 Rothamsted Research

Baltimore Classification

Higher order taxa

Virus; Retro-transcribing viruses; Caulimoviridae; Caulimovirus

Species

Blueberry red ringspot virus, Carnation etched ring virus, Cauliflower mosaic virus, Cestrum yellow leaf curling virus, Dahlia mosaic virus, Figwort mosaic virus, Horseradish latent virus, Mirabilis mosaic virus, Strawberry vein banding virus

Description and Significance

Cauliflower mosaic virus, in the genus Caulimovirus of the family Caulimoviridae, was the first plant virus discovered to use DNA instead of RNA as its genetic material. Members of this genus are plant pararetroviruses, meaning they use reverse transcription of an RNA intermediate in order to replicate. (sources: Haas et al., Mushegian et al.)

Genome Structure

The genome contains a single molecule of circular and is not segmented. The genome is made of a double stranded DNA and is -RT. Virions do not contain minor species of non-genomic nucleic acid. The complete genome is sequenced, but can only be estimated at about 8000 nucleotides long. It has single-stranded discontinuities at specific sites and the transcribed strand has at least one discontinuity while the non-trnascribed strand has two discontinuities. The genome may have an intergenic poly (A) region. Members of this genus have 6 or 7 open reading frames (ORFs); viruses in the Caulimoviridae family with either more or fewer ORFs have been reclassified into other genera in the family (sources: ICTVdB, Descriptions of Plant Viruses)

Virion Structure of a Caulimovirus

The virions of a caulimovirus consist of a round, non-enveloped capsid that has icosahedral symmetry (T=7). The isometric capsid is 35-47.52-50 nm in diameter. The capsid shells of the caulimovirus virions are composed of multiple layers. The capsids appear round or hexagonal in outline. The capsomer arrangement may be clearly visible or not so obvious. (source: ICTVdB, Mushegian et al.)

Reproduction Cycle of a Caulimovirus in a Host Cell

Replication involves the reverse transcription of an RNA intermediate. (source: Mushegian et al.)

Viral Ecology & Pathology

Caulimoviruses may be transmitted by a vector, mechanical inoculation, grafting or contact between hosts. Caulimoviruses are not transmitted by seeds or pollen. Vector transmission is conducted by insects of the order Hemiptera, family Aphididae. The virus is transmitted in a semi-persistent or non-persistent manner. The vector looses the virus when it moults. The virus does not replicate in the vector and is not transmitted congenitally to the progeny of the vector. (source: ICTVdB)

References

Descriptions of Plant Viruses: Notes on Genus: Caulimovirus.

Haas et al. "Cauliflower mosaic virus : still in the news." Molecular Plant Pathology 3.6 (2002): 419-429.

ICTVdB - The Universal Virus Database, version 4. http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/

Mushegian et al. "Molecular Analysis of the Essential and Nonessential Genetic Elements in the Genome of Peanut Chlorotic Streak Caulimovirus." Virology 206.2 (1995): 823-834.