Difference between revisions of "Clostridium cellulovorans"

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==Genome Structure==
 
==Genome Structure==
[[File:Cellulochromosome.jpg|200px|thumb|left|Chromosome map]]
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[[File:Cellulochromosome.jpg|190px|thumb|left|Chromosome map]]
 
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Genome sequencing of ''C. cellulovorans'' has been completed. ''C. Cellulovorans'' contains a circular chromosome with a length of 5,262,222 base pairs which is about 1 Mbp larger than the genomes from other cellulosomal clostridia. 31% of the genome is GC and 69% is AT. 57 cellulosomal genes were reported in ''C. cellulovorans''. ''C. cellulovorans'' contains large number of genes encoding non-cellulosomal enzymes which are more associated with polysaccharide (such as hemicelluloses and pectins) degradations other than cellulose. Scientists have found two novel genes encoding scaffolding proteins in ''C. cellulovorans'' genome <Br> <Br> <Br> <Br> <Br><Br> <Br>
 
Genome sequencing of ''C. cellulovorans'' has been completed. ''C. Cellulovorans'' contains a circular chromosome with a length of 5,262,222 base pairs which is about 1 Mbp larger than the genomes from other cellulosomal clostridia. 31% of the genome is GC and 69% is AT. 57 cellulosomal genes were reported in ''C. cellulovorans''. ''C. cellulovorans'' contains large number of genes encoding non-cellulosomal enzymes which are more associated with polysaccharide (such as hemicelluloses and pectins) degradations other than cellulose. Scientists have found two novel genes encoding scaffolding proteins in ''C. cellulovorans'' genome <Br> <Br> <Br> <Br> <Br><Br> <Br>

Revision as of 19:15, 20 April 2011

This student page has not been curated.

Classification

Phylogenic tree

• Kingdom - Bacteria
• Phylum - Firmicutes
• Class - Clostridia
• Order - Clostridiales
• Family - Clostridiaceae
• Genus - Clostridium

Species

NCBI:Taxonomy,Genome

Clostridium cellulovorans

Other name: Clostridium cellulovorans strain 743B

Description and Significance

Cellulose


Originally isolated from a batch methanogenic fermentation of hybrid poplar wood, Clostridium cellulovorans(ATCC 35296) is rod shaped and non-motile. C. cellulovorans is an anaerobic, spore forming, gram-negative bacterium. C. cellulovorans is a mesophilic bacterium with optimum growth temperature of 37°C, though it can grow in a temperature range of 20 to 40°C. Optimum pH is 7.0, and the pH range of growth is 6.4 to 7.8. This organism produces extracellular enzyme complex known as cellulosomes which can degrade plant cell walls, notably cellulose. As most abundantly available potential source of fermentable sugars in the world are the cell walls in higher plants, utilization of such a vast resource for energy production would reduce the dependency on non-renewable fossil fuels. Hence, C. cellulovorans have potential industrial application for energy production.

Genome Structure

Chromosome map



Genome sequencing of C. cellulovorans has been completed. C. Cellulovorans contains a circular chromosome with a length of 5,262,222 base pairs which is about 1 Mbp larger than the genomes from other cellulosomal clostridia. 31% of the genome is GC and 69% is AT. 57 cellulosomal genes were reported in C. cellulovorans. C. cellulovorans contains large number of genes encoding non-cellulosomal enzymes which are more associated with polysaccharide (such as hemicelluloses and pectins) degradations other than cellulose. Scientists have found two novel genes encoding scaffolding proteins in C. cellulovorans genome






Cell Structure, Metabolism and Life Cycle

C. cellulovorans do not reduce sulfate and are obligate anaerobes. Cells are 0.7 to 0.9 by 2.5 to 3.5 µm in size and are non-motile rods, though peritrichous flagella were detected under electron microscopy. Both spores and vegetative colonies of C. cellulovorans are irregular, containing opaque edges and hollow centers. Spores are oblong occuring either centrally or subterminally within the mature sporangium.

C. cellulovorans grown in cellulose (A) and in other medium (B)

C. cellulovorans obtains energy through the fermentation of cellulose using cellulosomes. Apart from cellulose, C. cellulovorans ferments various carbon sources, such as xylan, pectin, cellobiose, glucose, fructose, galactose, sucrose, lactose and mannose and the fermentation products are hydrogen, carbon dioxide, acetate, butyrate, formate and lactate. When grown in cellulose, C. cellulovorans forms ultrastructural protuberances, which may be aggregation of smaller cellulosome complexes, also known as polycellulosomes. These protuberances were detected only in cellulose-grown cells and disappeared rapidly when other soluble carbohydrates were added to the growth medium. Cellulosomal components synergistically interact to catalyze the degradation of cellulose and hence, cellulosome acts as a macromolecular machine.

Ecology and Pathogenesis

Clostridium cellulovorans is non pathogenic to human beings.

References

Bayer, E. A., Shimon, L. J. W., Shoham, Y. and Lamed, R. "Cellulosomes - Structure and ultrastructure". Journal of Structural Biology. 1998. Volume 124. p. 221-234.

Blair, B. G. and Anderson, K. L. "Regulation of cellulose-inducible structures of Clostridium cellulovorans. Can J Microbiol. 1999. Volume 45. p. 242-249.

Himmel, M. E., Ruth, M. F. and Wyman, C. E. "Cellulase for commodity products from cellulosic biomass". Current opinion in biotechnology. 1999.Volume 10. p. 358-364.

Tamaru, Y. et al. "Genome Sequence of the Cellulosome-Producing Mesophilic Organism Clostridium cellulovorans 743B". 2010. Journal of Bacteriology. 2010. Volume 192. p. 901-902.

Tamaru, Y., Miyake, H., Kuroda, K., Ueda, M. and Doi, R. H. "Comparative genomics of the mesophilic cellulosome-producing Clostridium cellulovorans and its application to biofuel production via consolidated bioprocessing". Environtal Technology. 2010. Volume 31. p. 889-903.

Tamaru, Y. and Doi, P. H. "Pectate lyase A, an enzymatic subunit of the Clostridium cellulovorans cellulosome". Proceedings of the National Academy of Sciences of the USA.2001. Volume 98. p. 4125-4129.

Sleat, R., Mah, R. A. and Robinson, R. "Isolation and Characterization of an Anaerobic, Cellulolytic Bacterium, Clostridium-cellulovorans Sp-Nov". Applied Environmental Microbiology.1984. Volume 48. p. 88-93.

Author

Page authored by Umesh Adhikari and Joe Araiz, student of Prof. Jay Lennon at Michigan State University.