https://microbewiki.kenyon.edu/index.php?title=Desulfuromonas&feed=atom&action=history
Desulfuromonas - Revision history
2024-03-28T22:21:19Z
Revision history for this page on the wiki
MediaWiki 1.39.6
https://microbewiki.kenyon.edu/index.php?title=Desulfuromonas&diff=54389&oldid=prev
BarichD at 21:36, 30 July 2010
2010-07-30T21:36:39Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 21:36, 30 July 2010</td>
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BarichD
https://microbewiki.kenyon.edu/index.php?title=Desulfuromonas&diff=5459&oldid=prev
BarichD at 14:09, 16 August 2006
2006-08-16T14:09:46Z
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<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">{|</del></div></td><td colspan="2" class="diff-side-added"></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">| height="69" bgcolor="#FFDF95" |</del></div></td><td colspan="2" class="diff-side-added"></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">'''NCBI:<br />[http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=890&lvl=3&lin=f&keep=1&srchmode=1&unlock Taxonomy]<br />[http://www.ncbi.nlm.nih.gov/genomes/framik.cgi?db=genome&gi=5309 Genome]'''</del></div></td><td colspan="2" class="diff-side-added"></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">|}</del></div></td><td colspan="2" class="diff-side-added"></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Image:desac.gif|frame|right|''D. acetoxidans ''from the [http://genome.jgi-psf.org/draft_microbes/desac/desac.home.html Joint Genome Institute.]]] </div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Image:desac.gif|frame|right|''D. acetoxidans ''from the [http://genome.jgi-psf.org/draft_microbes/desac/desac.home.html Joint Genome Institute.]]] </div></td></tr>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>''D. acetexigens, D. acetoxidans D. chloroethenica, D. michiganensis, D. palmitatis, D. thiophila, D. sp.''</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>''D. acetexigens, D. acetoxidans D. chloroethenica, D. michiganensis, D. palmitatis, D. thiophila, D. sp.''</div></td></tr>
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<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| height="10" bgcolor="#FFDF95" |</ins></div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">'''NCBI: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=890&lvl=3&lin=f&keep=1&srchmode=1&unlock Taxonomy] [http://www.ncbi.nlm.nih.gov/genomes/framik.cgi?db=genome&gi=5309 Genome]'''</ins></div></td></tr>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and Significance==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and Significance==</div></td></tr>
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BarichD
https://microbewiki.kenyon.edu/index.php?title=Desulfuromonas&diff=5021&oldid=prev
BarichD at 14:04, 14 August 2006
2006-08-14T14:04:11Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 14:04, 14 August 2006</td>
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BarichD
https://microbewiki.kenyon.edu/index.php?title=Desulfuromonas&diff=2139&oldid=prev
Tashiror: /* Cell Structure and Metabolism */
2006-06-05T13:06:54Z
<p><span dir="auto"><span class="autocomment">Cell Structure and Metabolism</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 13:06, 5 June 2006</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell Structure and Metabolism==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell Structure and Metabolism==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">[[Image:desulfuromonas.jpg|frame|right|''D. acetoxidans''. From the [http://www.umass.edu/umhome/index.php University of Massachusetts.]]]</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>''Desulfuromonas,'' like other sulfur-reducing bacteria, has a very unique and complex metabolism. ''Desulfuromonas''uses a variety of enzymes and organic compounds in order to reduce sulfate into sulfide. The reduction process is extremely complex, and the flow of reducing equivalents from electron donors is often linked to respiratory energy conservation utilizing a range of electron carriers as well. The reduction to sulfide from sulfate process has eight-electron steps and uses a variety of intermediates. ''Desulfuromonas ''typically would not excrete until the final oxidation state with the product of sulfide (R. Rabus ''et al.'', 2004).</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>''Desulfuromonas,'' like other sulfur-reducing bacteria, has a very unique and complex metabolism. ''Desulfuromonas''uses a variety of enzymes and organic compounds in order to reduce sulfate into sulfide. The reduction process is extremely complex, and the flow of reducing equivalents from electron donors is often linked to respiratory energy conservation utilizing a range of electron carriers as well. The reduction to sulfide from sulfate process has eight-electron steps and uses a variety of intermediates. ''Desulfuromonas ''typically would not excrete until the final oxidation state with the product of sulfide (R. Rabus ''et al.'', 2004).</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;"></del></div></td><td colspan="2" class="diff-side-added"></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">[[Image:desulfuromonas.jpg|frame|right|''D. acetoxidans''. From the [http://www.umass.edu/umhome/index.php University of Massachusetts.]]]</del></div></td><td colspan="2" class="diff-side-added"></td></tr>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td></tr>
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Tashiror
https://microbewiki.kenyon.edu/index.php?title=Desulfuromonas&diff=2136&oldid=prev
Tashiror at 13:04, 5 June 2006
2006-06-05T13:04:50Z
<p></p>
<p><b>New page</b></p><div>{|<br />
| height="69" bgcolor="#FFDF95" |<br />
'''NCBI:<br />[http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=890&lvl=3&lin=f&keep=1&srchmode=1&unlock Taxonomy]<br />[http://www.ncbi.nlm.nih.gov/genomes/framik.cgi?db=genome&gi=5309 Genome]'''<br />
|}<br />
[[Image:desac.gif|frame|right|''D. acetoxidans ''from the [http://genome.jgi-psf.org/draft_microbes/desac/desac.home.html Joint Genome Institute.]]] <br />
<br />
==Classification==<br />
<br />
<br />
===Higher order taxa:===<br />
<br />
Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae<br />
<br />
===Species:===<br />
<br />
''D. acetexigens, D. acetoxidans D. chloroethenica, D. michiganensis, D. palmitatis, D. thiophila, D. sp.''<br />
<br />
==Description and Significance==<br />
<br />
''Desulfuromonas''is a Gram-negative bacteria, known for being a sulfur reducing eubacteria through conversion of elemental sulfur into sulfide. Unlike some other sulfur-reducing bacteria, it does not reduce sulfate. A recent study has demonstrated that ''Desulfuromonas'' is a distinct phylogenetic cluster (one of three, the others being ''Geobacter'' and ''Dulfuromusa'') within the the phylogenetically coherenent family Geobaceraceae, which falls within the delta subclass Proteobacteria. Click [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15388715&query_hl=11 here] for more information.<br />
<br />
==Genome Structure==<br />
<br />
Projects to sequence the genome of ''D. acetoxidans''organisms are beginning by organizations such as the [http://www.biomax.com/ Biomax Informatics] project, but so far only a preliminary analysis has been completed. The unfinished sequence of ''Desulfuromonas acetexigens'' can be found [http://www.ncbi.nlm.nih.gov/genomes/framik.cgi?db=genome&gi=5309 here]. <br />
<br />
==Cell Structure and Metabolism==<br />
<br />
''Desulfuromonas,'' like other sulfur-reducing bacteria, has a very unique and complex metabolism. ''Desulfuromonas''uses a variety of enzymes and organic compounds in order to reduce sulfate into sulfide. The reduction process is extremely complex, and the flow of reducing equivalents from electron donors is often linked to respiratory energy conservation utilizing a range of electron carriers as well. The reduction to sulfide from sulfate process has eight-electron steps and uses a variety of intermediates. ''Desulfuromonas ''typically would not excrete until the final oxidation state with the product of sulfide (R. Rabus ''et al.'', 2004).<br />
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[[Image:desulfuromonas.jpg|frame|right|''D. acetoxidans''. From the [http://www.umass.edu/umhome/index.php University of Massachusetts.]]]<br />
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==Ecology==<br />
<br />
''Desulfuromonas''species are typically scarce in freshwater, but found frequently in anoxic marine and brackish water sediments because of the high suflur concentration ( R. Rabus ''et al.'', 2004).<br />
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==References==<br />
<br />
[http://www.biomax.com/ Biomax Informatics. 2004. PENDANT Genome Database.]<br />
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[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15388715&query_hl=11 Holmes DE, Nevin KP, Lovley DR. "Comparison of 16S rRNA, nifD, recA, gyrB, rpoB and fusA genes within the family Geobacteraceae fam. nov." ''International journal of systematic and evolutionary microbiology.'' 2004 Sep;54(Pt 5):1591-9.]<br />
<br />
[http://genome.jgi-psf.org/draft_microbes/desac/desac.home.html Joint Genome Institute. 2004. Draft Genome. Desulfuromonas acetoxidans].<br />
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[http://141.150.157.117:8080/prokPUB/index.htm Rabus, R., T. Hansen, F. Widdel. 2004. The Prokaryotes: An Evolving Electronic Resource for the Mircobiological Community. 2004. Springer-Verlag New York, LLC.]<br />
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[http://www.sciencedaily.com/releases/2002/01/020118074643.htm University of Massachusetts. 2002. News Release. UMass Study Uses Microbes to Turn Mud into Electricity.]</div>
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