NCBI Taxonomy ID:
Species: Dietzia cinnamea
Description and Significance
Samples of this microbe have been found in nature twice. The first was from a perianal swab from a patient with a bone marrow transplant (Yassin, 2006). The second, named P4, was extracted from petroleum contaminated soil characterized in acidic sandy loam Cambisol soil in a protected habitat in Rio de Janeiro state, Brazil (Von der Weid, 2006). Multiple strains of Dietzia have been found in soil, deep sea sediment, and soda lakes (Gerday & Glansdorff, 2007).Dietzia cinnamea is rod shaped in the medical swab while the P4 strain from the soil samples produces a coccoid shape. The organism is approximately 1.4 micrometers long, forms smooth, yellow to orange colonies on agar plates once isolated and is single or arranges in small connected colonies (Von der Weid, 2006). It is gram positive and has a high G+C content, meaning a high number of Guanine and Cytosine linkages in its DNA(Von der Weid, 2006). It displays snapping division, which is the arrangement of cells in a palisade or angular manor after binary fission (Prescott, 2002). This is a characteristic of the genera Arthrobacter and Corynebacterium.
The full DNA code for D.cinnamea has been partially sequenced and contains 3,555,295 bp (NCBI Nucleotide):. D.cinnamea has a GC content of 72.3% (Von der Weid, 2006). DNA of the P4 strain was sequenced with a 16S rDNA and it was found to have a 99.8% similarity to D.cinnamea that was found in the previous bone marrow transplant swab. When testing DNA-DNA similarities, the strains were 93.3% homologous with the transplant swab. A 70% threshold of DNA-DNA similarity is required to include it in the species. This confirms that P4 is part of the species D.cinnamea. This species has a 30-50% genome similarity with the other species of Dietzia (D.maris 52.4%, D.natronolimnaea' 56.3%, D.psychraicliphila 37.8%)(Von der Weid, 2006).
Cell Structure, Metabolism, and Life Cycle
D.cinnamea is gram positive and ranges from rod to coccoid shaped. Average cell size is approximately 1.4 micrometers.
D.cinnamea is an aerobic organotroph. It’s optimal growth temperature is between 22-45⁰ C and extracts carbon from acetate, D-glucose, maltose, and 1,2-propanediol (Yassin, 2006). However, the soil extracted culture Capable of growing between pH 6 to 10 and is slightly halotolerant effectively growing in 10% NaCl concentration.
Reduces nitrate to nitrite.
Ecology and Pathogenesis
Dietzia has been found in multiple habitats including soil, deep sea sediment, and soda lakes.
Gerday, C., & Glansdorff, N. (2007). Physiology and biochemistry of extremophiles. Washington, D.C.: American Society for Mircrobiology Press.
Prescott, L., Klein, D., & Harley, J. (2002). Microbiology. Retrieved from Online Learning Center: http://highered.mcgraw-hill.com/sites/0072320419/student_view0/glossary_s-z.html
Von Der Weid, I., Marques, J. M., Cunha, C. D., Lippi, R. K., Dos Santos, S. C. C., Rosado, A. S., Lins, U., et al. (2007). Identification and biodegradation potential of a novel strain of Dietzia cinnamea isolated from a petroleum-contaminated tropical soil. Systematic and applied microbiology, 30(4), 331-339. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/1717450
Yassin, A., Hupfer, H., & Schaal, K. (2006). Dietzia cinnamea sp.nov., a novel species isolated from a perianal swab of a patient with a bone marrow transplant. International Journal of Systematic and Evolutionary Microbiology , 641-645.
This page was created by Jennifer Jury and Elizabeth ___, students of Prof. Jay Lennon's Microbial Ecology Class at MSU.