Merkel cell polyomavirus: Difference between revisions

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==Genome structure==
==Genome structure==
MCV has a 5.4 kbp circular double stranded DNA genome and is a non-enveloped virus.  The virus typically integrates at different locations within the human genome in different tumors. [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2481414/?tool=pubmed (1)]
MCV has a 5.4 kbp circular double stranded DNA genome and is a non-enveloped virus.  The virus typically integrates at different locations within the human genome in different tumors. Once the virus is integrated into the DNA within the tumor, it cannot be cut out from its host cell.  Instead, it must replicate as the host cell replicates. [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2481414/?tool=pubmed (1)]


Describe the size and content of the genome.  How many chromosomes and plasmids?  Circular or linear?  Other interesting features?  What is known about its sequence?
Describe the size and content of the genome.  How many chromosomes and plasmids?  Circular or linear?  Other interesting features?  What is known about its sequence?

Revision as of 02:45, 2 November 2011

This student page has not been curated.

A Microbial Biorealm page on the genus Merkel cell polyomavirus

Classification

Virus; dsDNA viruses, no RNA stage; Polyomaviridae; polyomavirus; unclassified polyomavirus (Merkel cell polyomavirus)

Description and significance

Merkel cell polyomavirus is a human tumor virus. It is suspected to be the cause of most cases of a rare skin cancer called Merkel cell carcinoma.

Describe the disease caused by this organism if it is a pathogen, or the natural macroscopic "field guide" appearance and habitat of your organism if it is not. What is or has been the impact your organism on human history or our environment?. How does it do this? How have we harnessed this power, or tried to prevent it? In other words, how do you know it if you see it, and how does its presence influence humans in the present, and historically?

Genome structure

MCV has a 5.4 kbp circular double stranded DNA genome and is a non-enveloped virus. The virus typically integrates at different locations within the human genome in different tumors. Once the virus is integrated into the DNA within the tumor, it cannot be cut out from its host cell. Instead, it must replicate as the host cell replicates. (1)

Describe the size and content of the genome. How many chromosomes and plasmids? Circular or linear? Other interesting features? What is known about its sequence?

Cell structure, metabolism & life cycle

MCV virus-like particles resemble typical icosahedral polyomavirus capsids that are 55–58 nm diameter (4)

Provide a physical and biochemical description of the organism. What kind of organism is it, what does it look like, how is it built, what are its metabolic properties, how can it be identified, what is it's life cycle, &c. In other words, describe the organism from its perspective.

Ecology (including pathogenesis)

Describe its habitat, symbiosis, and contributions to environment. If it is a pathogen, how does this organism cause disease? Human, animal, plant hosts? Describe virulence factors and patient symptoms.

Interesting feature

Describe in detail one particularly interesting aspect of your organism or it's affect on humans or the environment.

References

(1) Garneski K. M., DeCaprio J. A., Nghiem, P. "Does a new polyomavirus contribute to Merkel cell carcinoma?" Genome Biology. 2008. Volume 9(6). p. 228.

[Sample reference] Takai, K., Sugai, A., Itoh, T., and Horikoshi, K. "Palaeococcus ferrophilus gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". International Journal of Systematic and Evolutionary Microbiology. 2000. Volume 50. p. 489-500.