https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&feed=atom&action=history
Metallosphaera cuprina - Revision history
2024-03-29T06:35:26Z
Revision history for this page on the wiki
MediaWiki 1.39.6
https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&diff=79095&oldid=prev
WilhelmR at 05:29, 27 December 2012
2012-12-27T05:29:36Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 05:29, 27 December 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>[[File:Genome_Mcuprina.png|<del style="font-weight: bold; text-decoration: none;">200px</del>|thumb|left|Genome of <i>Metallosphaera cuprina</i> [[#References|[15]]] ]]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>[[File:Genome_Mcuprina.png|<ins style="font-weight: bold; text-decoration: none;">400px</ins>|thumb|left|Genome of <i>Metallosphaera cuprina</i> [[#References|[15]]] ]]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The <i>M. cuprina</i> genome is 1.84Mb [[#References|[2]]] and contains 2077 genes [[#References|[9]]]. In comparison, <i>[https://microbewiki.kenyon.edu/index.php/Metallosphaera_sedula Metallosphaera sedula]</i> has a 2.19 Mb genome and 2307 genes [[#References|[11]]], making the <i>M. cuprina genome</i>16% smaller than <i>M. sedula</i>.<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The <i>M. cuprina</i> genome is 1.84Mb [[#References|[2]]] and contains 2077 genes [[#References|[9]]]. In comparison, <i>[https://microbewiki.kenyon.edu/index.php/Metallosphaera_sedula Metallosphaera sedula]</i> has a 2.19 Mb genome and 2307 genes [[#References|[11]]], making the <i>M. cuprina genome</i>16% smaller than <i>M. sedula</i>.<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>[[File:Phylogenetic_tree-Mcuprina.png|<del style="font-weight: bold; text-decoration: none;">400px</del>|thumb|right|Phylogenetic tree of <i>Metallosphaera cuprina</i> and related species [[#References|[14]]] ]]<br></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>[[File:Phylogenetic_tree-Mcuprina.png|<ins style="font-weight: bold; text-decoration: none;">600px</ins>|thumb|right|Phylogenetic tree of <i>Metallosphaera cuprina</i> and related species [[#References|[14]]] ]]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The Ar-4<sup>T</sup> strain of <i>M. cuprina</i> has a GC content of 40.2 mol%. This is slightly lower than other <i>Metallosphaera</i> species: <i>M. sedula</i>, 46.2 mol% [8]; and [http://en.wikipedia.org/wiki/Metallosphaera_hakonensis <i>Metallosphaera hakonensis</i>], 46.2 mol%[[#References|[10]]]; [http://en.wikipedia.org/wiki/Metallosphaera_prunae <i>Metallosphaera prunae</i>], 46 mol%[[#References|[4]]].<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The Ar-4<sup>T</sup> strain of <i>M. cuprina</i> has a GC content of 40.2 mol%. This is slightly lower than other <i>Metallosphaera</i> species: <i>M. sedula</i>, 46.2 mol% [8]; and [http://en.wikipedia.org/wiki/Metallosphaera_hakonensis <i>Metallosphaera hakonensis</i>], 46.2 mol%[[#References|[10]]]; [http://en.wikipedia.org/wiki/Metallosphaera_prunae <i>Metallosphaera prunae</i>], 46 mol%[[#References|[4]]].<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>This strain shares sequence similarities of 97.7% with <i>M. hakonensis</i> DSM 7519<sup>T</sup>, 97.0% with <i>M. sedula</i> DSM 5348<sup>T</sup>, and 96.8% with <i>M. prunae</i> DSM 10039<sup>T</sup>. [[#References|[1]]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>This strain shares sequence similarities of 97.7% with <i>M. hakonensis</i> DSM 7519<sup>T</sup>, 97.0% with <i>M. sedula</i> DSM 5348<sup>T</sup>, and 96.8% with <i>M. prunae</i> DSM 10039<sup>T</sup>. [[#References|[1]]]</div></td></tr>
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WilhelmR
https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&diff=78982&oldid=prev
Jenn.wibowo at 10:14, 15 December 2012
2012-12-15T10:14:01Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 10:14, 15 December 2012</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l15">Line 15:</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><i>M. cuprina</i> differs from other species of [http://en.wikipedia.org/wiki/Metallosphaera <i>Metallosphaera</i>] as it is more extermophilic and can grow in lower temperatures and higher pH than most. <i>M. cuprina</i> grows best at 65°C, and pH 3.5, but can grow in ranges of 0-1% (w/v) NaCl, 55-75° C, and pH 2.5-5.5. [[#References|[1]]]<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><i>M. cuprina</i> differs from other species of [http://en.wikipedia.org/wiki/Metallosphaera <i>Metallosphaera</i>] as it is more extermophilic and can grow in lower temperatures and higher pH than most. <i>M. cuprina</i> grows best at 65°C, and pH 3.5, but can grow in ranges of 0-1% (w/v) NaCl, 55-75° C, and pH 2.5-5.5. [[#References|[1]]]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>There is potential for the use of <i>M. cuprina</i> and other <i>Metallosphaera</i> in the mining industry through [http://en.wikipedia.org/wiki/Bioleaching bioleaching], due to its oxidation of reduced inorganic sulfur compounds. [[#References|[2]]] Bacteria are typically used to further oxidize Fe<sup>3+</sup>-oxidized ore, and regenerate Fe<sup>2+</sup>. <del style="font-weight: bold; text-decoration: none;">[[#References|[15]]]</del><br></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>There is potential for the use of <i>M. cuprina</i> and other <i>Metallosphaera</i> in the mining industry through [http://en.wikipedia.org/wiki/Bioleaching bioleaching], due to its oxidation of reduced inorganic sulfur compounds. [[#References|[2]]] Bacteria are typically used to further oxidize Fe<sup>3+</sup>-oxidized ore, and regenerate Fe<sup>2+</sup>. <br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>[[File:<del style="font-weight: bold; text-decoration: none;">Phylogenetic_tree-Mcuprina</del>.png|<del style="font-weight: bold; text-decoration: none;">400px</del>|thumb|<del style="font-weight: bold; text-decoration: none;">right</del>|<del style="font-weight: bold; text-decoration: none;">Phylogenetic tree </del>of <i>Metallosphaera cuprina</i> <del style="font-weight: bold; text-decoration: none;">and related species </del>[[#References|[<del style="font-weight: bold; text-decoration: none;">14</del>]]] ]]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>[[File:<ins style="font-weight: bold; text-decoration: none;">Genome_Mcuprina</ins>.png|<ins style="font-weight: bold; text-decoration: none;">200px</ins>|thumb|<ins style="font-weight: bold; text-decoration: none;">left</ins>|<ins style="font-weight: bold; text-decoration: none;">Genome </ins>of <i>Metallosphaera cuprina</i> [[#References|[<ins style="font-weight: bold; text-decoration: none;">15</ins>]]] ]]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The <i>M. cuprina</i> genome is 1.84Mb [[#References|[2]]] and contains 2077 genes [[#References|[9]]]. In comparison, <i>[https://microbewiki.kenyon.edu/index.php/Metallosphaera_sedula Metallosphaera sedula]</i> has a 2.19 Mb genome and 2307 genes [[#References|[11]]], making the <i>M. cuprina genome</i>16% smaller than <i>M. sedula</i>.<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The <i>M. cuprina</i> genome is 1.84Mb [[#References|[2]]] and contains 2077 genes [[#References|[9]]]. In comparison, <i>[https://microbewiki.kenyon.edu/index.php/Metallosphaera_sedula Metallosphaera sedula]</i> has a 2.19 Mb genome and 2307 genes [[#References|[11]]], making the <i>M. cuprina genome</i>16% smaller than <i>M. sedula</i>.<br></div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">[[File:Phylogenetic_tree-Mcuprina.png|400px|thumb|right|Phylogenetic tree of <i>Metallosphaera cuprina</i> and related species [[#References|[14]]] ]]<br></ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The Ar-4<sup>T</sup> strain of <i>M. cuprina</i> has a GC content of 40.2 mol%. This is slightly lower than other <i>Metallosphaera</i> species: <i>M. sedula</i>, 46.2 mol% [8]; and [http://en.wikipedia.org/wiki/Metallosphaera_hakonensis <i>Metallosphaera hakonensis</i>], 46.2 mol%[[#References|[10]]]; [http://en.wikipedia.org/wiki/Metallosphaera_prunae <i>Metallosphaera prunae</i>], 46 mol%[[#References|[4]]].<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The Ar-4<sup>T</sup> strain of <i>M. cuprina</i> has a GC content of 40.2 mol%. This is slightly lower than other <i>Metallosphaera</i> species: <i>M. sedula</i>, 46.2 mol% [8]; and [http://en.wikipedia.org/wiki/Metallosphaera_hakonensis <i>Metallosphaera hakonensis</i>], 46.2 mol%[[#References|[10]]]; [http://en.wikipedia.org/wiki/Metallosphaera_prunae <i>Metallosphaera prunae</i>], 46 mol%[[#References|[4]]].<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>This strain shares sequence similarities of 97.7% with <i>M. hakonensis</i> DSM 7519<sup>T</sup>, 97.0% with <i>M. sedula</i> DSM 5348<sup>T</sup>, and 96.8% with <i>M. prunae</i> DSM 10039<sup>T</sup>. [[#References|[1]]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>This strain shares sequence similarities of 97.7% with <i>M. hakonensis</i> DSM 7519<sup>T</sup>, 97.0% with <i>M. sedula</i> DSM 5348<sup>T</sup>, and 96.8% with <i>M. prunae</i> DSM 10039<sup>T</sup>. [[#References|[1]]]</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Through 16S rRNA gene sequence analysis, it is observed that <i>M. cuprina</i> shares less than 90% similarities with the [http://en.wikipedia.org/wiki/Acidianus]<i>Acidianus</i> genera, and less than 88% similarities with the [https://microbewiki.kenyon.edu/index.php/Sulfolobus <i>Sulfolobus</i>] genera. [[#References|[1]]]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Through 16S rRNA gene sequence analysis, it is observed that <i>M. cuprina</i> shares less than 90% similarities with the [http://en.wikipedia.org/wiki/Acidianus]<i>Acidianus</i> genera, and less than 88% similarities with the [https://microbewiki.kenyon.edu/index.php/Sulfolobus <i>Sulfolobus</i>] genera. [[#References|[1]]]<ins style="font-weight: bold; text-decoration: none;"><br></ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell Structure, Metabolism and Life Cycle==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell Structure, Metabolism and Life Cycle==</div></td></tr>
<tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l34">Line 34:</td>
<td colspan="2" class="diff-lineno">Line 36:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Its cellular lipids are mainly composed of calditoglycerocaldarchaeol and [http://en.wikipedia.org/wiki/Caldarchaeol caldarchaeol]—the same core lipids that are also present in <i>M. sedula</i>, <i>M. hakonensis</i>, and <i>S. acidocaldarius</i> [[#References|[1]]]. Caldarchaeol provide stability to the cell membrane and are present in many [http://en.wikipedia.org/wiki/Hyperthermophile hyperthermophilic] archaea. While calditoglycerocaldarchaeol is also present in many [http://en.wikipedia.org/wiki/Sulfolobales Sulfolobales], it might not be required for survival in [http://en.wikipedia.org/wiki/Thermoacidophile thermoacidophilic] environments. [[#References|[12]]]<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Its cellular lipids are mainly composed of calditoglycerocaldarchaeol and [http://en.wikipedia.org/wiki/Caldarchaeol caldarchaeol]—the same core lipids that are also present in <i>M. sedula</i>, <i>M. hakonensis</i>, and <i>S. acidocaldarius</i> [[#References|[1]]]. Caldarchaeol provide stability to the cell membrane and are present in many [http://en.wikipedia.org/wiki/Hyperthermophile hyperthermophilic] archaea. While calditoglycerocaldarchaeol is also present in many [http://en.wikipedia.org/wiki/Sulfolobales Sulfolobales], it might not be required for survival in [http://en.wikipedia.org/wiki/Thermoacidophile thermoacidophilic] environments. [[#References|[12]]]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><i>M. cuprina</i> is an aerobic and facultatively chemolithoautotrophic species also capable of [http://en.wikipedia.org/wiki/Organotroph organotrophic] growth on various organic materials. <i>M. cuprina</i> is able to use sulfidic ore as a source of metal ions, in addition to oxidizing reduced sulfur compounds. [[#References|[1]]] Therefore, along with <i>M. sedula</i>, <i>M. cuprina</i> has a good degree of physiological versatility [[#References|[7]]]. <i>M. cuprina</i> is capable of chemolithoautotrophic growth using elemental sulfur, K<sub>2</sub>S<sub>4</sub>O<sub>6</sub>, and FeSO<sub>4</sub>. Similar to most reported members of the <i>Metallosphaera</i> genus, <i>M. cuprina</i> is capable of using tetrationate and pyrite or FeS as sulfur sources; L-Aspartic acid, L-Glutamic acid, L-Tryptophan, and L-Alanine as amino acid sources; and yeast extract, beef extract, peptone, tryptone, and Casamino acids as organic substrates. Unlike its fellow genus members, <i>M. cuprina</i> is capable of using L-Arabinose, D-Xylose, D-gGlucose, sucrose, and raffinose as sugars. As in <i>M. sedula</i>, <i>M. cuprina</i> is incapable of using D-Mannose for sugars. [[#References|[1]]]<br></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><i>M. cuprina</i> is an aerobic and facultatively <ins style="font-weight: bold; text-decoration: none;">[http://en.wikipedia.org/wiki/Chemolithoautotroph </ins>chemolithoautotrophic<ins style="font-weight: bold; text-decoration: none;">] </ins>species also capable of [http://en.wikipedia.org/wiki/Organotroph organotrophic] growth on various organic materials. <i>M. cuprina</i> is able to use sulfidic ore as a source of metal ions, in addition to oxidizing reduced sulfur compounds. [[#References|[1]]] Therefore, along with <i>M. sedula</i>, <i>M. cuprina</i> has a good degree of physiological versatility [[#References|[7]]]. <i>M. cuprina</i> is capable of chemolithoautotrophic growth using elemental sulfur, K<sub>2</sub>S<sub>4</sub>O<sub>6</sub>, and FeSO<sub>4</sub>. Similar to most reported members of the <i>Metallosphaera</i> genus, <i>M. cuprina</i> is capable of using tetrationate and pyrite or FeS as sulfur sources; L-Aspartic acid, L-Glutamic acid, L-Tryptophan, and L-Alanine as amino acid sources; and yeast extract, beef extract, peptone, tryptone, and Casamino acids as organic substrates. Unlike its fellow genus members, <i>M. cuprina</i> is capable of using L-Arabinose, D-Xylose, D-gGlucose, sucrose, and raffinose as sugars. As in <i>M. sedula</i>, <i>M. cuprina</i> is incapable of using D-Mannose for sugars. [[#References|[1]]]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>M. cuprina has a complete [http://en.wikipedia.org/wiki/TCA_cycle TCA cycle] and an incomplete [http://en.wikipedia.org/wiki/Pentose_phosphate_pathway pentose phosphate pathway]. [[#References|[2]]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>M. cuprina has a complete [http://en.wikipedia.org/wiki/TCA_cycle TCA cycle] and an incomplete [http://en.wikipedia.org/wiki/Pentose_phosphate_pathway pentose phosphate pathway]. [[#References|[2]]]</div></td></tr>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>13. [http://www.sciencedirect.com/science/article/pii/S1389172399801893 Kulaev, I., Vagabov, V., Kulakovskaya, T. “New aspects of inorganic polyphosphate metabolism and function”. Journal of Bioscience and Bioengineering, 1999, DOI: 10.1016/S1389-1723(99)80189-3.] <br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>13. [http://www.sciencedirect.com/science/article/pii/S1389172399801893 Kulaev, I., Vagabov, V., Kulakovskaya, T. “New aspects of inorganic polyphosphate metabolism and function”. Journal of Bioscience and Bioengineering, 1999, DOI: 10.1016/S1389-1723(99)80189-3.] <br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>14. http://microbes.ucsc.edu/cgi-bin/hgGateway?org=Metallosphaera+cuprina+Ar+4&db=metaCupr1&hgsid=649090 <br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>14. http://microbes.ucsc.edu/cgi-bin/hgGateway?org=Metallosphaera+cuprina+Ar+4&db=metaCupr1&hgsid=649090 <br></div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>15. <del style="font-weight: bold; text-decoration: none;">[</del>http://<del style="font-weight: bold; text-decoration: none;">en</del>.<del style="font-weight: bold; text-decoration: none;">wikipedia</del>.org/<del style="font-weight: bold; text-decoration: none;">wiki/Bioleaching Bioleaching] </del><br></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>15. http://<ins style="font-weight: bold; text-decoration: none;">www</ins>.<ins style="font-weight: bold; text-decoration: none;">p2tf</ins>.org/<ins style="font-weight: bold; text-decoration: none;">page.php?base=Metc4DB&PHPSESSID=4c17464cff49fcf1aa9065eb6104f2a5 </ins><br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Author==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Author==</div></td></tr>
</table>
Jenn.wibowo
https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&diff=78979&oldid=prev
Jenn.wibowo: /* Genome Structure and Phylogeny */
2012-12-15T09:31:04Z
<p><span dir="auto"><span class="autocomment">Genome Structure and Phylogeny</span></span></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 09:31, 15 December 2012</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l19">Line 19:</td>
<td colspan="2" class="diff-lineno">Line 19:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>[[File:Phylogenetic_tree-Mcuprina.png|400px|thumb|right|Phylogenetic tree of <i>Metallosphaera cuprina</i> and related species [14] ]]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>[[File:Phylogenetic_tree-Mcuprina.png|400px|thumb|right|Phylogenetic tree of <i>Metallosphaera cuprina</i> and related species <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[14<ins style="font-weight: bold; text-decoration: none;">]]</ins>] ]]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The <i>M. cuprina</i> genome is 1.84Mb [[#References|[2]]] and contains 2077 genes [[#References|[9]]]. In comparison, <i>[https://microbewiki.kenyon.edu/index.php/Metallosphaera_sedula Metallosphaera sedula]</i> has a 2.19 Mb genome and 2307 genes [[#References|[11]]], making the <i>M. cuprina genome</i>16% smaller than <i>M. sedula</i>.<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The <i>M. cuprina</i> genome is 1.84Mb [[#References|[2]]] and contains 2077 genes [[#References|[9]]]. In comparison, <i>[https://microbewiki.kenyon.edu/index.php/Metallosphaera_sedula Metallosphaera sedula]</i> has a 2.19 Mb genome and 2307 genes [[#References|[11]]], making the <i>M. cuprina genome</i>16% smaller than <i>M. sedula</i>.<br></div></td></tr>
</table>
Jenn.wibowo
https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&diff=78978&oldid=prev
Jenn.wibowo: /* Genome Structure and Phylogeny */
2012-12-15T09:30:24Z
<p><span dir="auto"><span class="autocomment">Genome Structure and Phylogeny</span></span></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 09:30, 15 December 2012</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l18">Line 18:</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">[[File:Phylogenetic_tree-Mcuprina.png|400px|thumb|right|Phylogenetic tree of <i>Metallosphaera cuprina</i> and related species [14] ]]</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The <i>M. cuprina</i> genome is 1.84Mb [[#References|[2]]] and contains 2077 genes [[#References|[9]]]. In comparison, <i>[https://microbewiki.kenyon.edu/index.php/Metallosphaera_sedula Metallosphaera sedula]</i> has a 2.19 Mb genome and 2307 genes [[#References|[11]]], making the <i>M. cuprina genome</i>16% smaller than <i>M. sedula</i>.<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>The <i>M. cuprina</i> genome is 1.84Mb [[#References|[2]]] and contains 2077 genes [[#References|[9]]]. In comparison, <i>[https://microbewiki.kenyon.edu/index.php/Metallosphaera_sedula Metallosphaera sedula]</i> has a 2.19 Mb genome and 2307 genes [[#References|[11]]], making the <i>M. cuprina genome</i>16% smaller than <i>M. sedula</i>.<br></div></td></tr>
</table>
Jenn.wibowo
https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&diff=78976&oldid=prev
Jenn.wibowo: /* Classification */
2012-12-15T09:27:05Z
<p><span dir="auto"><span class="autocomment">Classification</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 09:27, 15 December 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Classification==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Classification==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Domain: [<i>Archaea</i>]<br></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Domain: [<ins style="font-weight: bold; text-decoration: none;">https://microbewiki.kenyon.edu/index.php/Archaea </ins><i>Archaea</i>]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Phylum: [http://en.wikipedia.org/wiki/Crenarchaeota <i>Crenarchaeota</i>]<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Phylum: [http://en.wikipedia.org/wiki/Crenarchaeota <i>Crenarchaeota</i>]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Class: [http://en.wikipedia.org/wiki/Thermoprotei<i>Thermoprotei</i>]<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Class: [http://en.wikipedia.org/wiki/Thermoprotei<i>Thermoprotei</i>]<br></div></td></tr>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Family: [http://en.wikipedia.org/wiki/Sulfolobaceae <i>Sulfolobaceae</i>]<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Family: [http://en.wikipedia.org/wiki/Sulfolobaceae <i>Sulfolobaceae</i>]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Genus: [http://en.wikipedia.org/wiki/Metallosphaera <i>Metallosphaera</i>]<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Genus: [http://en.wikipedia.org/wiki/Metallosphaera <i>Metallosphaera</i>]<br></div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;"></del></div></td><td colspan="2" class="diff-side-added"></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and Significance==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and Significance==</div></td></tr>
</table>
Jenn.wibowo
https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&diff=78975&oldid=prev
Jenn.wibowo: /* Description and Significance */
2012-12-15T09:25:01Z
<p><span dir="auto"><span class="autocomment">Description and Significance</span></span></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 09:25, 15 December 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><i>Metallosphaera cuprina</i> was originally isolated from muddy hot spring water in the Yunnan province of China and is named in reference to copper, <i>cuprina</i>, due to the extraction of copper from ores near the hotspring. [[#References|[1]]]<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><i>Metallosphaera cuprina</i> was originally isolated from muddy hot spring water in the Yunnan province of China and is named in reference to copper, <i>cuprina</i>, due to the extraction of copper from ores near the hotspring. [[#References|[1]]]<br></div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><i>M. cuprina</i> differs from other species of [http://en.wikipedia.org/wiki/Metallosphaera <i>Metallosphaera</i>] as it is more extermophilic and can grow in lower temperatures and higher pH than most. <i>M. cuprina</i> grows best at 65°C, and pH 3.5, but can grow in ranges of 0-1% (w/v) NaCl, 55-75° C, and pH 2.5-5.5. [[#References|[1]]]<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><i>M. cuprina</i> differs from other species of [http://en.wikipedia.org/wiki/Metallosphaera <i>Metallosphaera</i>] as it is more extermophilic and can grow in lower temperatures and higher pH than most. <i>M. cuprina</i> grows best at 65°C, and pH 3.5, but can grow in ranges of 0-1% (w/v) NaCl, 55-75° C, and pH 2.5-5.5. [[#References|[1]]]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
</table>
Jenn.wibowo
https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&diff=78974&oldid=prev
Jenn.wibowo: /* Description and Significance */
2012-12-15T09:24:42Z
<p><span dir="auto"><span class="autocomment">Description and Significance</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 09:24, 15 December 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><i>M. cuprina</i> differs from other species of [http://en.wikipedia.org/wiki/Metallosphaera <i>Metallosphaera</i>] as it is more extermophilic and can grow in lower temperatures and higher pH than most. <i>M. cuprina</i> grows best at 65°C, and pH 3.5, but can grow in ranges of 0-1% (w/v) NaCl, 55-75° C, and pH 2.5-5.5. [[#References|[1]]]<br></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><i>M. cuprina</i> differs from other species of [http://en.wikipedia.org/wiki/Metallosphaera <i>Metallosphaera</i>] as it is more extermophilic and can grow in lower temperatures and higher pH than most. <i>M. cuprina</i> grows best at 65°C, and pH 3.5, but can grow in ranges of 0-1% (w/v) NaCl, 55-75° C, and pH 2.5-5.5. [[#References|[1]]]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>There is potential for the use of <i>M. cuprina</i> and other <i>Metallosphaera</i> in the mining industry through [http://en.wikipedia.org/wiki/Bioleaching bioleaching], due to its oxidation of reduced inorganic sulfur compounds. [[#References|[2]]] Bacteria are typically used to further oxidize Fe<sup>3+</sup>-oxidized ore, and regenerate Fe<sup>2+</sup>. [[#References|[15]]<br></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>There is potential for the use of <i>M. cuprina</i> and other <i>Metallosphaera</i> in the mining industry through [http://en.wikipedia.org/wiki/Bioleaching bioleaching], due to its oxidation of reduced inorganic sulfur compounds. [[#References|[2]]] Bacteria are typically used to further oxidize Fe<sup>3+</sup>-oxidized ore, and regenerate Fe<sup>2+</sup>. [[#References|[15<ins style="font-weight: bold; text-decoration: none;">]</ins>]]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td></tr>
</table>
Jenn.wibowo
https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&diff=78973&oldid=prev
Jenn.wibowo: /* Description and Significance */
2012-12-15T09:24:25Z
<p><span dir="auto"><span class="autocomment">Description and Significance</span></span></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
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<tr class="diff-title" lang="en">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 09:24, 15 December 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and Significance==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and Significance==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><i>Metallosphaera cuprina</i> was originally isolated from muddy hot spring water in the Yunnan province of China and is named in reference to copper, <i>cuprina</i>, due to the extraction of copper from ores near the hotspring. [1]<br></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><i>Metallosphaera cuprina</i> was originally isolated from muddy hot spring water in the Yunnan province of China and is named in reference to copper, <i>cuprina</i>, due to the extraction of copper from ores near the hotspring. <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[1<ins style="font-weight: bold; text-decoration: none;">]]</ins>]<br></div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><i>M. cuprina</i> differs from other species of [http://en.wikipedia.org/wiki/Metallosphaera <i>Metallosphaera</i>] as it is more extermophilic and can grow in lower temperatures and higher pH than most. <i>M. cuprina</i> grows best at 65°C, and pH 3.5, but can grow in ranges of 0-1% (w/v) NaCl, 55-75° C, and pH 2.5-5.5. [1]<del style="font-weight: bold; text-decoration: none;"><br></del></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><i>M. cuprina</i> differs from other species of [http://en.wikipedia.org/wiki/Metallosphaera <i>Metallosphaera</i>] as it is more extermophilic and can grow in lower temperatures and higher pH than most. <i>M. cuprina</i> grows best at 65°C, and pH 3.5, but can grow in ranges of 0-1% (w/v) NaCl, 55-75° C, and pH 2.5-5.5. <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[1]]]<br></div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> </div></td><td colspan="2" class="diff-side-added"></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">There is potential for the use of <i>M. cuprina</i> and other <i>Metallosphaera</i> in the mining industry through [http://en.wikipedia.org/wiki/Bioleaching bioleaching], due to its oxidation of reduced inorganic sulfur compounds. [2</del>] <del style="font-weight: bold; text-decoration: none;">Bacteria are typically used to further oxidize Fe<sup>3+</sup>-oxidized ore, and regenerate Fe<sup>2+</sup>. [15</del>]<br></div></td><td colspan="2" class="diff-side-added"></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">There is potential for the use of <i>M. cuprina</i> and other <i>Metallosphaera</i> in the mining industry through [http://en.wikipedia.org/wiki/Bioleaching bioleaching], due to its oxidation of reduced inorganic sulfur compounds. [[#References|[2]]] Bacteria are typically used to further oxidize Fe<sup>3+</sup>-oxidized ore, and regenerate Fe<sup>2+</sup>. [[#References|[15]]<br></ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td></tr>
</table>
Jenn.wibowo
https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&diff=78972&oldid=prev
Jenn.wibowo: /* Genome Structure and Phylogeny */
2012-12-15T09:23:47Z
<p><span dir="auto"><span class="autocomment">Genome Structure and Phylogeny</span></span></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 09:23, 15 December 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome Structure and Phylogeny==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>The <i>M. cuprina</i> genome is 1.84Mb [2] and contains 2077 genes [9]. In comparison, <i>[https://microbewiki.kenyon.edu/index.php/Metallosphaera_sedula Metallosphaera sedula]</i> has a 2.19 Mb genome and 2307 genes [11], making the <i>M. cuprina genome</i>16% smaller than <i>M. sedula</i>.<br></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>The <i>M. cuprina</i> genome is 1.84Mb <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[2<ins style="font-weight: bold; text-decoration: none;">]]</ins>] and contains 2077 genes <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[9<ins style="font-weight: bold; text-decoration: none;">]]</ins>]. In comparison, <i>[https://microbewiki.kenyon.edu/index.php/Metallosphaera_sedula Metallosphaera sedula]</i> has a 2.19 Mb genome and 2307 genes <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[11<ins style="font-weight: bold; text-decoration: none;">]]</ins>], making the <i>M. cuprina genome</i>16% smaller than <i>M. sedula</i>.<br></div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>The Ar-4<sup>T</sup> strain of <i>M. cuprina</i> has a GC content of 40.2 mol%. This is slightly lower than other <i>Metallosphaera</i> species: <i>M. sedula</i>, 46.2 mol% [8]; and [http://en.wikipedia.org/wiki/Metallosphaera_hakonensis <i>Metallosphaera hakonensis</i>], 46.2 mol%[10]; [http://en.wikipedia.org/wiki/Metallosphaera_prunae <i>Metallosphaera prunae</i>], 46 mol%[4].<br></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>The Ar-4<sup>T</sup> strain of <i>M. cuprina</i> has a GC content of 40.2 mol%. This is slightly lower than other <i>Metallosphaera</i> species: <i>M. sedula</i>, 46.2 mol% [8]; and [http://en.wikipedia.org/wiki/Metallosphaera_hakonensis <i>Metallosphaera hakonensis</i>], 46.2 mol%<ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[10<ins style="font-weight: bold; text-decoration: none;">]]</ins>]; [http://en.wikipedia.org/wiki/Metallosphaera_prunae <i>Metallosphaera prunae</i>], 46 mol%<ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[4<ins style="font-weight: bold; text-decoration: none;">]]</ins>].<br></div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>This strain shares sequence similarities of 97.7% with <i>M. hakonensis</i> DSM 7519<sup>T</sup>, 97.0% with <i>M. sedula</i> DSM 5348<sup>T</sup>, and 96.8% with <i>M. prunae</i> DSM 10039<sup>T</sup>. [1]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>This strain shares sequence similarities of 97.7% with <i>M. hakonensis</i> DSM 7519<sup>T</sup>, 97.0% with <i>M. sedula</i> DSM 5348<sup>T</sup>, and 96.8% with <i>M. prunae</i> DSM 10039<sup>T</sup>. <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[1<ins style="font-weight: bold; text-decoration: none;">]]</ins>]</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Through 16S rRNA gene sequence analysis, it is observed that <i>M. cuprina</i> shares less than 90% similarities with the [http://en.wikipedia.org/wiki/Acidianus]<i>Acidianus</i> genera, and less than 88% similarities with the [https://microbewiki.kenyon.edu/index.php/Sulfolobus <i>Sulfolobus</i>] genera. [1]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Through 16S rRNA gene sequence analysis, it is observed that <i>M. cuprina</i> shares less than 90% similarities with the [http://en.wikipedia.org/wiki/Acidianus]<i>Acidianus</i> genera, and less than 88% similarities with the [https://microbewiki.kenyon.edu/index.php/Sulfolobus <i>Sulfolobus</i>] genera. <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[1<ins style="font-weight: bold; text-decoration: none;">]]</ins>]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell Structure, Metabolism and Life Cycle==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell Structure, Metabolism and Life Cycle==</div></td></tr>
</table>
Jenn.wibowo
https://microbewiki.kenyon.edu/index.php?title=Metallosphaera_cuprina&diff=78971&oldid=prev
Jenn.wibowo: /* Ecology */
2012-12-15T09:22:49Z
<p><span dir="auto"><span class="autocomment">Ecology</span></span></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 09:22, 15 December 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><i>Metallosphaera cuprina</i> was originally isolated from sulfuric hot springs in Yunnan, China. [1] The isolation of this organism from an extreme environment is in line with others of the genus, which were originally isolated from heated waste matter from a mine [4], a hot spring [5], and a sulfurous volcanic field [6]. As <i>M. cuprina</i> was found in a sulfur hot spring, and found able to grow in temperatures up to 75°C and pH as low as 2.5, it can be considered an acidothermophile. [1]<br></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><i>Metallosphaera cuprina</i> was originally isolated from sulfuric hot springs in Yunnan, China. <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[1<ins style="font-weight: bold; text-decoration: none;">]]</ins>] The isolation of this organism from an extreme environment is in line with others of the genus, which were originally isolated from heated waste matter from a mine <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[4<ins style="font-weight: bold; text-decoration: none;">]]</ins>], a hot spring <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[5<ins style="font-weight: bold; text-decoration: none;">]]</ins>], and a sulfurous volcanic field <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[6<ins style="font-weight: bold; text-decoration: none;">]]</ins>]. As <i>M. cuprina</i> was found in a sulfur hot spring, and found able to grow in temperatures up to 75°C and pH as low as 2.5, it can be considered an acidothermophile. <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[1<ins style="font-weight: bold; text-decoration: none;">]]</ins>]<br></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>[http://en.wikipedia.org/wiki/Polyphosphate Polyphosphates] are present in all types of cells and are known to act as a phosphate and energy source, and a regulator of various cellular processes such as [http://en.wikipedia.org/wiki/Adenosine_triphosphate ATP] regulation [13]. Inorganic polyphosphate has been proposed as a mechanism for the resistance of <i>M. cuprina</i> and other extremeophiles to the extreme conditions that they encounter, such as high metals, salt, and temperature. [3]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>[http://en.wikipedia.org/wiki/Polyphosphate Polyphosphates] are present in all types of cells and are known to act as a phosphate and energy source, and a regulator of various cellular processes such as [http://en.wikipedia.org/wiki/Adenosine_triphosphate ATP] regulation <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[13<ins style="font-weight: bold; text-decoration: none;">]]</ins>]. Inorganic polyphosphate has been proposed as a mechanism for the resistance of <i>M. cuprina</i> and other extremeophiles to the extreme conditions that they encounter, such as high metals, salt, and temperature. <ins style="font-weight: bold; text-decoration: none;">[[#References|</ins>[3<ins style="font-weight: bold; text-decoration: none;">]]</ins>]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td></tr>
</table>
Jenn.wibowo