Difference between revisions of "Moritella marina"
m (→Genome Structure)
|Line 33:||Line 33:|
. of and a . ()
=Ecology and pathogenesis=
=Ecology and pathogenesis=
Revision as of 03:41, 14 December 2016
Moritella marina ATCC 15381T
Related species M. japonica, M. yayanosii, M. viscosa, M. profunda, M. abyssi, M. dasanesis
Description and Significance
Moritella marina is a gram-negative halophilic psychrophilic facultative anaerobe with curved or straight rods, motile polar flagella that produce PUFA’s (polyunsaturated fatty acids) and DHA (docosahexanoic acid). “Twenty-five years ago, a marine bacterium originally designated Vibrio marinus and later renamed Moritella marina MP-1 was reported to produce high levels of DHA (18% of the total fatty acids). Such high levels of DHA presumably provide this bacterium with the ability to maintain appropriate membrane fluidity in the low temperatures and high pressures of its marine environment.” “Phylogenetic tree of some representatives of the γ-subclass of the class Proteobacteria showing the position of 16S rDNA sequences from some Alteromonas macleodii-related strains and clone sequences from picoplankton DNA from the Mediterranean Sea mesocosm experiment. Sequences of clones 17B161 and 1B161 are available under accession number Y18229 and Y18231, respectively. The tree was calculated by the algorithm of De Soete . The percentage of 500 bootstrap samplings that support branching points above 80% confidence are indicated. The scale bar corresponds to two nucleotide substitutions over 100 sequence positions. The tree was rooted with Roseobacter algicola as an outgroup.” (FEMS, 1998)
16S Ribosomal RNA Gene Information
“Sequence variation at positions 73–98 and 181–214 (E. coli nomenclature) within two variable regions of the 16S rDNA of representatives of clone clusters 1–5 and some strains isolated from mesocosm B. Probe target regions are in bold” (FEMS,1998)
The draft genome of M. marina MP-1 (ATCC 15381) consisting of 83 contigs includes 4,636,778 bp and 4,121 predicted coding DNA sequences with a G+C content of 40.5%. There are 34 predicted RNAs, one predicted copy of 16S rRNA, and four predicted copies of 23S rRNA (Kautharapu and Jarboe 2012).
Ecology and pathogenesis
Moritella marina have been found in a variety of cold water marine environments, ranging from the ocean floor to the intestinal tract of marine organisms. Most Moritella species are thought to live mutualistically amongst larger marine organisms, but Moritella viscosa has been noted to cause skin ulcers in some fish (Urakawa, 2014).
Moritella marina has been noted for having unusually high production of the long chain polyunsaturated fatty acids (PUFAs). When M. marina strain MP-1 was cultured in medium containing cerulenin, a fatty acid synthesis inhibitor, decreases in levels of middle-chain fatty acids and remarkable increases in levels of DHA were observed. These results suggest that the synthesis of middle-chain fatty acids works independently of the synthesis of DHA. M. marina was also found to produce chitonase when induced with chiton (Stefanidi, E., & Vorgias, C. E., 2008).
And, Kumar B. Kautharapu. "Kumar B. Kautharapu." Genome Sequence of the Psychrophilic Deep-Sea Bacterium Moritella Marina MP-1 (ATCC 15381). N.p., 2012. Web. 02 Dec. 2016. http://jb.asm.org/content/194/22/6296.full
Urakawa, H., Kita-Tsukamoto, K., Steven, S. E., Ohwada, K., & Colwell, R. R. (1998). A proposal to transfer Vibrio marinus (Russell 1891) to a new genus Moritella gen. nov. as Moritella marina comb. nov. FEMS microbiology letters, 165(2), 373-378. http://femsle.oxfordjournals.org/content/165/2/373.full#ref-13
Pukall, R., Päuker, O., Buntefuß, D., Ulrichs, G., Lebaron, P., Bernard, L., ... & Stackebrandt, E. (1999). High sequence diversity of Alteromonas macleodii-related cloned and cellular 16S rDNAs from a Mediterranean seawater mesocosm experiment. FEMS Microbiology Ecology, 28(4), 335-344. http://femsec.oxfordjournals.org/content/28/4/335
Stefanidi, E., & Vorgias, C. E. (2008). Molecular analysis of the gene encoding a new chitinase from the marine psychrophilic bacterium Moritella marina and biochemical characterization of the recombinant enzyme. Extremophiles, 12(4), 541-552. "FEMS Microbiology Ecology." High Sequence Diversity of Alteromonas Macleodii-related Cloned and Cellular 16S RDNAs from a Mediterranean Seawater Mesocosm Experiment | FEMS Microbiology Ecology. N.p., n.d. Web. 02 Dec. 2016. http://femsec.oxfordjournals.org/content/28/4/335
Genome structure image: https://www.patricbrc.org/portal/portal/patric/CircosGenomeViewer?cType=genome&cId=1202962.4
Sarah Fayed and Brandon Galindo with Microbial Ecology Instructor Dr. Hideotoshi Urakawa