Natronococcus roseus: Difference between revisions

From MicrobeWiki, the student-edited microbiology resource
No edit summary
 
(16 intermediate revisions by one other user not shown)
Line 1: Line 1:
[[Category:Pages edited by studentsof Jay Lennon at MSU]]
{{Uncurated}}
=Classification & Phylogeny=
=Classification & Phylogeny=


[[File:Natronococcus Phylogeny.gif|400px|thumb|right|''Natronococcus Phylogeny'']]
[[File:Natronococcus Phylogeny.gif|400px|thumb|right|''Natronococcus Phylogeny'' [[#References|[1]]] ]]


Domain: Archaea
Domain: Archaea
Line 20: Line 22:




The strain was closely related to ''Natronococcus amylolyticus'', ''Natronococcus jeotgali'', & ''Natronococcus occultus'', sharing 98.4%, 96.2%, and 95.7% 16S rRNA sequence respectively.[[#References|[1]]][[#References|[4]]]
''Natronococcus roseus'' is closely related to ''Natronococcus amylolyticus'', ''Natronococcus jeotgali'', & ''Natronococcus occultus'', sharing 98.4%, 96.2%, and 95.7% 16S rRNA sequence respectively. This relationship is shown in the phylogenetic tree.[[#References|[1]]][[#References|[4]]]


=Description & Significance=
=Description & Significance=


[[File:Natronococcus Occultus.jpeg|400px|thumb|right|''Natronococcus Occultus'']]
[[File:Natronococcus Occultus.jpeg|400px|thumb|right|''Natronococcus occultus'' [[#References|[2]]] ]]


The bacterium was isolated from Lake Chagannor in Inner Mongolia, China. The colonies were pink with color intensity decreasing when the cells grew at salt saturation levels.[[#References|[1]]][[#References|[4]]]  
The bacterium was isolated from Lake Chagannor in Inner Mongolia, China. The colonies were pink with color intensity that decreased when the cells grew at salt saturation levels.[[#References|[1]]][[#References|[4]]]  


The bacterium was found in irregular clusters, pairs, and single cells. N. roseus is non-motile, cocci, gram-variable, obligate aerobe, and reduces nitrate to nitrite. Optimal growth range is between 8% and 30% NaCl, at a pH range of 8.5-11 (prefers 9.5), and a temperature range of 20-50°C (optimum at 40 °C).[[#References|[1]]][[#References|[4]]]
The bacterium was found in irregular clusters, pairs, and single cells. N. roseus is non-motile, cocci, gram-variable, obligate aerobe, and reduces nitrate to nitrite. Optimal growth range is between 8% and 30% NaCl, at a pH range of 8.5-11 (prefers 9.5), and a temperature range of 20-50°C (optimum at 40 °C).[[#References|[1]]][[#References|[4]]]


Notably the lack of the phospholipid, PL2, sets it apart from it's relative ''Natronococcus occultus''. It's lipids contain derivatives of phosphatidylglycerol (PG), phosphatidylglycerol phosphate methyl ester (PGP-Me) and minor phospholipid components. No glycolipids were detected. [[#References|[1]]][[#References|[4]]]
Notably the lack of the phospholipid, PL2, sets it apart from it's relative ''Natronococcus occultus''. It's lipids contain derivatives of phosphatidylglycerol (PG), phosphatidylglycerol phosphate methyl ester (PGP-Me) and minor phospholipid components. No glycolipids were found. [[#References|[1]]][[#References|[4]]]


The bacterium is susceptible to novobiocin (10 µg), bacitracin (10 µg), anisomycin (5 µg), erythromycin (15 µg) and streptomycin (10 µg); resistant to rifampicin (5 µg), ampicillin (10 µg), neomycin (30 µg), chloramphenicol (30 µg) and nalidixic acid (30 µg).[[#References|[1]]][[#References|[4]]]
The bacterium is susceptible to novobiocin (10 µg), bacitracin (10 µg), anisomycin (5 µg), erythromycin (15 µg) and streptomycin (10 µg); resistant to rifampicin (5 µg), ampicillin (10 µg), neomycin (30 µg), chloramphenicol (30 µg) and nalidixic acid (30 µg).[[#References|[1]]][[#References|[4]]]
Line 36: Line 38:
=Metabolism=
=Metabolism=


''Natronococcus'' uses glucose, lactose, sucrose, d-fructose, maltose, d-mannitol, sorbitol, glutamate, acetate, lactate, propionate, pyruvate, and succinate. For carbon and energy however, it does not use galacose, sobose, arabinose, and rhamnose. The bacterium uses the amino acids serine, threonine, glycine, asparagine and lysine.''Natronococcus'' reduces nitrate to nitrite as is common amongst halophiles.[[#References|[1]]][[#References|[4]]]  
''Natronococcus'' uses glucose, lactose, sucrose, d-fructose, maltose, d-mannitol, sorbitol, glutamate, acetate, lactate, propionate, pyruvate, and succinate. For carbon and energy however, it does not use galacose, sobose, arabinose, and rhamnose. The bacterium uses the amino acids serine, threonine, glycine, asparagine and lysine. ''Natronococcus'' reduces nitrate to nitrite as is common amongst halophiles.[[#References|[1]]][[#References|[4]]]
 


=Genomic Content=
=Genomic Content=




The strain has a G+C content ratio of 62.1 mol%, while the minor component has a content of 55.7 mol%. Th value falls within range for the ''Natronococcus'' genus.[[#References|[1]]][[#References|[4]]]
The strain has a G+C content ratio of 62.1 mol%, while the minor component has a content of 55.7 mol%. The value falls within range for the ''Natronococcus'' genus.[[#References|[1]]][[#References|[4]]]
 


=Reproduction=
=Reproduction=


''Natronococcus'' like all archaea reproduces asexually.[[#References|[3]]]
''Natronococcus roseus'' like all archaea reproduces asexually through binary fission.[[#References|[3]]]
 


=Ecology=
=Ecology=


''Natronococcus'' is a chemooganotrophic bacterium thus far only isolated from Lake Chagannor.  
''Natronococcus roseus'' is a chemooganotrophic bacterium thus far only isolated from Lake Chagannor, a hypersaline lake. [[#References|[1]]]


=References=
=References=

Latest revision as of 14:01, 4 October 2017

This student page has not been curated.

Classification & Phylogeny

Natronococcus Phylogeny [1]

Domain: Archaea

Kingdom: Euryarchaeota

Phylum: Euryarchaeota

Class: Halobacteria

Order: Halobacteriales

Family: Halobacteriaceae

Genus: Natronococcus

Species: Natronococcus roseus


Natronococcus roseus is closely related to Natronococcus amylolyticus, Natronococcus jeotgali, & Natronococcus occultus, sharing 98.4%, 96.2%, and 95.7% 16S rRNA sequence respectively. This relationship is shown in the phylogenetic tree.[1][4]

Description & Significance

Natronococcus occultus [2]

The bacterium was isolated from Lake Chagannor in Inner Mongolia, China. The colonies were pink with color intensity that decreased when the cells grew at salt saturation levels.[1][4]

The bacterium was found in irregular clusters, pairs, and single cells. N. roseus is non-motile, cocci, gram-variable, obligate aerobe, and reduces nitrate to nitrite. Optimal growth range is between 8% and 30% NaCl, at a pH range of 8.5-11 (prefers 9.5), and a temperature range of 20-50°C (optimum at 40 °C).[1][4]

Notably the lack of the phospholipid, PL2, sets it apart from it's relative Natronococcus occultus. It's lipids contain derivatives of phosphatidylglycerol (PG), phosphatidylglycerol phosphate methyl ester (PGP-Me) and minor phospholipid components. No glycolipids were found. [1][4]

The bacterium is susceptible to novobiocin (10 µg), bacitracin (10 µg), anisomycin (5 µg), erythromycin (15 µg) and streptomycin (10 µg); resistant to rifampicin (5 µg), ampicillin (10 µg), neomycin (30 µg), chloramphenicol (30 µg) and nalidixic acid (30 µg).[1][4]

Metabolism

Natronococcus uses glucose, lactose, sucrose, d-fructose, maltose, d-mannitol, sorbitol, glutamate, acetate, lactate, propionate, pyruvate, and succinate. For carbon and energy however, it does not use galacose, sobose, arabinose, and rhamnose. The bacterium uses the amino acids serine, threonine, glycine, asparagine and lysine. Natronococcus reduces nitrate to nitrite as is common amongst halophiles.[1][4]

Genomic Content

The strain has a G+C content ratio of 62.1 mol%, while the minor component has a content of 55.7 mol%. The value falls within range for the Natronococcus genus.[1][4]

Reproduction

Natronococcus roseus like all archaea reproduces asexually through binary fission.[3]

Ecology

Natronococcus roseus is a chemooganotrophic bacterium thus far only isolated from Lake Chagannor, a hypersaline lake. [1]

References

(1.) Corral P, Gutierrez MC, Castillo AM, Dominguez M, Lopalco P, Corcelli A, Ventosa A. 2013. Natronococcus roseus sp nov., a haloalkaliphilic archaeon from a hypersaline lake. International Journal of Systematic and Evolutionary Microbiology 63:104-108.


(2.) H.N.M.Ross 2012, posting date. Electron micrograph of Natronococcus occultus. [Online.]


(3.) Krieg N. 2005. p. 21-22, Bergey's Manual of Systematic Bacteriology. US: Springer.


(4.) Tindall BJ, Ross HNM, Grant WD. 1984. NATRONOBACTERIUM GEN-NOV AND NATRONOCOCCUS GEN-NOV, 2 NEW GENERA OF HALOALKALIPHILIC ARCHAEBACTERIA. Systematic and Applied Microbiology 5:41-57.