https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&feed=atom&action=history
Oceanibulbus indolifex - Revision history
2024-03-29T07:11:03Z
Revision history for this page on the wiki
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https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&diff=73358&oldid=prev
Kaplanar: /* Pathology */
2012-05-03T16:47:41Z
<p><span dir="auto"><span class="autocomment">Pathology</span></span></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 16:47, 3 May 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Pathology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Pathology==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' has no known pathogenic effects on humans. The bacterium does have genes coding for [http://en.wikipedia.org/wiki/Beta-lactamase β-lactamases] indicating resistance to β-lactam antibiotics like penicillins, cephamycins, and carbapenems. ''Oceanibulbus indolifex'' is susceptible to aminoglycosides, antibiotics derived from bacteria of the genus Streptomyces that interfere with bacterial ribosome function.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' has no known pathogenic effects on humans. The bacterium does have genes coding for [http://en.wikipedia.org/wiki/Beta-lactamase β-lactamases] indicating resistance to β-lactam antibiotics like penicillins, cephamycins, and carbapenems. ''Oceanibulbus indolifex'' is susceptible to aminoglycosides, antibiotics derived from bacteria of the genus Streptomyces that interfere with bacterial ribosome function.<ins style="font-weight: bold; text-decoration: none;">(3)</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td></tr>
</table>
Kaplanar
https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&diff=73357&oldid=prev
Kaplanar: /* Metabolism */
2012-05-03T16:46:47Z
<p><span dir="auto"><span class="autocomment">Metabolism</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 16:46, 3 May 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Metabolism==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Metabolism==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' is an [http://en.wikipedia.org/wiki/Obligate_aerobe obligate aerobe], non-fermentative bacterium that requires oxygen to grow. The bacterium is a heterotroph that utilizes D-glucose, pyruvate, DL- lactate, serine, ornithine, alanine, asparagine, L-aspartate, L-glutamate, L-proline, succinate, mannitol, adipate, malate, citrate and glycerol as its carbon source and external electron donor reductant sources. ''Oceanibulbus indolifex'' contains Q10 (uibiquinone 10) as its dominant respiratory [http://en.wikipedia.org/wiki/Quinone quinone] in the electron transport chain to aid in ATP synthesis. Q10 is specific to members of Alphaproteobacteria class. ''Oceanibulbus indolifex'' does not hydrolyze gelatin, starch, urea, or aesculin. The bacterium tested slightly positive for the presence of [http://en.wikipedia.org/wiki/Cytochrome_c_oxidase cytochrome oxidase] a transmembrane protein complex in the electron transport chain that transfers electrons to oxygen and translocates four protons per electron to help create a gradient for ATP synthesis. ''Oceanibulbus indolifex'' does not reduce nitrate to nitrite. The bacterium produces indole, cyclic dipeptides, and thryptanthrin.(4)</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' is an [http://en.wikipedia.org/wiki/Obligate_aerobe obligate aerobe], non-fermentative bacterium that requires oxygen to grow. The bacterium is a heterotroph that utilizes D-glucose, pyruvate, DL- lactate, serine, ornithine, alanine, asparagine, L-aspartate, L-glutamate, L-proline, succinate, mannitol, adipate, malate, citrate and glycerol as its carbon source and external electron donor reductant sources. ''Oceanibulbus indolifex'' contains Q10 (uibiquinone 10) as its dominant respiratory [http://en.wikipedia.org/wiki/Quinone quinone] in the electron transport chain to aid in ATP synthesis. Q10 is specific to members of Alphaproteobacteria class. ''Oceanibulbus indolifex'' does not hydrolyze gelatin, starch, urea, or aesculin. The bacterium tested slightly positive for the presence of [http://en.wikipedia.org/wiki/Cytochrome_c_oxidase cytochrome oxidase] a transmembrane protein complex in the electron transport chain that transfers electrons to oxygen and translocates four protons per electron to help create a gradient for ATP synthesis. ''Oceanibulbus indolifex'' does not reduce nitrate to nitrite. The bacterium produces indole, cyclic dipeptides, and thryptanthrin.(4<ins style="font-weight: bold; text-decoration: none;">,6</ins>)</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td></tr>
</table>
Kaplanar
https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&diff=73356&oldid=prev
Kaplanar: /* Ecology */
2012-05-03T16:45:35Z
<p><span dir="auto"><span class="autocomment">Ecology</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 16:45, 3 May 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' has optimum growth from 25-30°C but can grow in a range all the way down to 8°C. The bacterium’s optimum growth occurs at a pH of 7 but it can tolerate a range from 7-9. The optimum salts concentration for growth is 3-5% and the halotolerance range is from 1-10%. ''Oceanibulbus indolifex'' does not grow in medium lacking salts or in medium containing only sodium chloride.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' has optimum growth from 25-30°C but can grow in a range all the way down to 8°C. The bacterium’s optimum growth occurs at a pH of 7 but it can tolerate a range from 7-9. The optimum salts concentration for growth is 3-5% and the halotolerance range is from 1-10%. ''Oceanibulbus indolifex'' does not grow in medium lacking salts or in medium containing only sodium chloride.<ins style="font-weight: bold; text-decoration: none;">(3)</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Pathology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Pathology==</div></td></tr>
</table>
Kaplanar
https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&diff=73355&oldid=prev
Kaplanar: /* Metabolism */
2012-05-03T16:45:22Z
<p><span dir="auto"><span class="autocomment">Metabolism</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 16:45, 3 May 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Metabolism==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Metabolism==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' is an [http://en.wikipedia.org/wiki/Obligate_aerobe obligate aerobe], non-fermentative bacterium that requires oxygen to grow. The bacterium is a heterotroph that utilizes D-glucose, pyruvate, DL- lactate, serine, ornithine, alanine, asparagine, L-aspartate, L-glutamate, L-proline, succinate, mannitol, adipate, malate, citrate and glycerol as its carbon source and external electron donor reductant sources. ''Oceanibulbus indolifex'' contains Q10 (uibiquinone 10) as its dominant respiratory [http://en.wikipedia.org/wiki/Quinone quinone] in the electron transport chain to aid in ATP synthesis. Q10 is specific to members of Alphaproteobacteria class. ''Oceanibulbus indolifex'' does not hydrolyze gelatin, starch, urea, or aesculin. The bacterium tested slightly positive for the presence of [http://en.wikipedia.org/wiki/Cytochrome_c_oxidase cytochrome oxidase] a transmembrane protein complex in the electron transport chain that transfers electrons to oxygen and translocates four protons per electron to help create a gradient for ATP synthesis. ''Oceanibulbus indolifex'' does not reduce nitrate to nitrite. The bacterium produces indole, cyclic dipeptides, and thryptanthrin.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' is an [http://en.wikipedia.org/wiki/Obligate_aerobe obligate aerobe], non-fermentative bacterium that requires oxygen to grow. The bacterium is a heterotroph that utilizes D-glucose, pyruvate, DL- lactate, serine, ornithine, alanine, asparagine, L-aspartate, L-glutamate, L-proline, succinate, mannitol, adipate, malate, citrate and glycerol as its carbon source and external electron donor reductant sources. ''Oceanibulbus indolifex'' contains Q10 (uibiquinone 10) as its dominant respiratory [http://en.wikipedia.org/wiki/Quinone quinone] in the electron transport chain to aid in ATP synthesis. Q10 is specific to members of Alphaproteobacteria class. ''Oceanibulbus indolifex'' does not hydrolyze gelatin, starch, urea, or aesculin. The bacterium tested slightly positive for the presence of [http://en.wikipedia.org/wiki/Cytochrome_c_oxidase cytochrome oxidase] a transmembrane protein complex in the electron transport chain that transfers electrons to oxygen and translocates four protons per electron to help create a gradient for ATP synthesis. ''Oceanibulbus indolifex'' does not reduce nitrate to nitrite. The bacterium produces indole, cyclic dipeptides, and thryptanthrin.<ins style="font-weight: bold; text-decoration: none;">(4)</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td></tr>
</table>
Kaplanar
https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&diff=73354&oldid=prev
Kaplanar: /* Cell and colony structure */
2012-05-03T16:44:58Z
<p><span dir="auto"><span class="autocomment">Cell and colony structure</span></span></p>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell and colony structure==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell and colony structure==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' is a gram-negative bacterium with irregular rod shaped single cells. The rod cells have slightly swollen ends. The cells range in length from 3-5 μm and in width from 1.8-2.5 μm. ''Oceanibulbus indolifex'' forms white colored colonies with a characteristic shiny surface. The bacterium consists of white [http://en.wikipedia.org/wiki/Inclusion_body inclusion bodies] that are not gas vesicles. These storage granules stain black with Sudan Black stain suggesting they contain [http://en.wikipedia.org/wiki/Polyhydroxybutyrate poly-β-hydroxybutyrate], a common bacterial storage compound.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' is a gram-negative bacterium with irregular rod shaped single cells. The rod cells have slightly swollen ends. The cells range in length from 3-5 μm and in width from 1.8-2.5 μm. ''Oceanibulbus indolifex'' forms white colored colonies with a characteristic shiny surface. The bacterium consists of white [http://en.wikipedia.org/wiki/Inclusion_body inclusion bodies] that are not gas vesicles. These storage granules stain black with Sudan Black stain suggesting they contain [http://en.wikipedia.org/wiki/Polyhydroxybutyrate poly-β-hydroxybutyrate], a common bacterial storage compound.<ins style="font-weight: bold; text-decoration: none;">(3,4)</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Metabolism==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Metabolism==</div></td></tr>
</table>
Kaplanar
https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&diff=73353&oldid=prev
Kaplanar: /* Genome structure */
2012-05-03T16:43:31Z
<p><span dir="auto"><span class="autocomment">Genome structure</span></span></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 16:43, 3 May 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome structure==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome structure==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' contains one circular chromosome. The whole genome has not yet been sequence. The complete sequence of the 16S rRNA gene of ''Oceanibulbus indolifex'' has a 97.4% identical sequence to [http://en.wikipedia.org/wiki/Sulfitobacter Sulfitobacter mediterraneus] and a 96.5% identical sequence to [http://en.wikipedia.org/wiki/Staleya Staleya guttiformis]. Thus, no other closely related microbes are known, thus supporting the discovery of a new genus and species. Analysis of the genome for ''Oceanibulbus indolifex'' indicates 60% G+C content of the DNA.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' contains one circular chromosome. The whole genome has not yet been sequence. The complete sequence of the 16S rRNA gene of ''Oceanibulbus indolifex'' has a 97.4% identical sequence to [http://en.wikipedia.org/wiki/Sulfitobacter Sulfitobacter mediterraneus] and a 96.5% identical sequence to [http://en.wikipedia.org/wiki/Staleya Staleya guttiformis]. Thus, no other closely related microbes are known, thus supporting the discovery of a new genus and species. Analysis of the genome for ''Oceanibulbus indolifex'' indicates 60% G+C content of the DNA.<ins style="font-weight: bold; text-decoration: none;">(5)</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell and colony structure==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell and colony structure==</div></td></tr>
</table>
Kaplanar
https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&diff=73350&oldid=prev
Kaplanar at 16:38, 3 May 2012
2012-05-03T16:38:03Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
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<tr class="diff-title" lang="en">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 16:38, 3 May 2012</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l16">Line 16:</td>
<td colspan="2" class="diff-lineno">Line 16:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and significance==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and significance==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Image:Screen_shot_2012-04-26_at_AM.png|frame|right|150px|This light microscope image shows the swollen end, rod shaped cells of Oceanibulbus indolifex [[http://ijs.sgmjournals.org/content/54/4/1177.full.pdf+html]]]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Image:Screen_shot_2012-04-26_at_AM.png|frame|right|150px|This light microscope image shows the swollen end, rod shaped cells of Oceanibulbus indolifex [[http://ijs.sgmjournals.org/content/54/4/1177.full.pdf+html]]]]</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' is a rod shaped, [http://en.wikipedia.org/wiki/Gram-negative gram-negative] [http://en.wikipedia.org/wiki/Proteobacteria proteobacteria] that forms shiny, white colonies and is not known to be pathogenic to humans. The bacterium was referred to as HEL-45T before it was discovered to be a new species. The bacterium was discovered on September 23, 1998 on the North Sea at 54° 08’ N 7° 52’ E. The sample was taken 2 km from the island of Helgoland at a depth of 10 m. This bacterium is significant because it marks the discovery of a new aerobic species of bacterium that thrives well below the ocean surface.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex'' is a rod shaped, [http://en.wikipedia.org/wiki/Gram-negative gram-negative] [http://en.wikipedia.org/wiki/Proteobacteria proteobacteria] that forms shiny, white colonies and is not known to be pathogenic to humans. The bacterium was referred to as HEL-45T before it was discovered to be a new species. The bacterium was discovered on September 23, 1998 on the North Sea at 54° 08’ N 7° 52’ E. The sample was taken 2 km from the island of Helgoland at a depth of 10 m. This bacterium is significant because it marks the discovery of a new aerobic species of bacterium that thrives well below the ocean surface.<ins style="font-weight: bold; text-decoration: none;">(3)</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome structure==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome structure==</div></td></tr>
</table>
Kaplanar
https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&diff=73348&oldid=prev
Kaplanar at 16:36, 3 May 2012
2012-05-03T16:36:42Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
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<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 16:36, 3 May 2012</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l16">Line 16:</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and significance==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and significance==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Image:Screen_shot_2012-04-26_at_AM.png|frame|right|150px|This light microscope image shows the swollen end, rod shaped cells of Oceanibulbus indolifex [[http://ijs.sgmjournals.org/content/54/4/1177.full.pdf+html]]]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Image:Screen_shot_2012-04-26_at_AM.png|frame|right|150px|This light microscope image shows the swollen end, rod shaped cells of Oceanibulbus indolifex [[http://ijs.sgmjournals.org/content/54/4/1177.full.pdf+html]]]]</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>is a rod shaped, [http://en.wikipedia.org/wiki/Gram-negative gram-negative] [http://en.wikipedia.org/wiki/Proteobacteria proteobacteria] that forms shiny, white colonies and is not known to be pathogenic to humans. The bacterium was referred to as HEL-45T before it was discovered to be a new species. The bacterium was discovered on September 23, 1998 on the North Sea at 54° 08’ N 7° 52’ E. The sample was taken 2 km from the island of Helgoland at a depth of 10 m. This bacterium is significant because it marks the discovery of a new aerobic species of bacterium that thrives well below the ocean surface.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>is a rod shaped, [http://en.wikipedia.org/wiki/Gram-negative gram-negative] [http://en.wikipedia.org/wiki/Proteobacteria proteobacteria] that forms shiny, white colonies and is not known to be pathogenic to humans. The bacterium was referred to as HEL-45T before it was discovered to be a new species. The bacterium was discovered on September 23, 1998 on the North Sea at 54° 08’ N 7° 52’ E. The sample was taken 2 km from the island of Helgoland at a depth of 10 m. This bacterium is significant because it marks the discovery of a new aerobic species of bacterium that thrives well below the ocean surface.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome structure==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome structure==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>contains one circular chromosome. The whole genome has not yet been sequence. The complete sequence of the 16S rRNA gene of <del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>has a 97.4% identical sequence to [http://en.wikipedia.org/wiki/Sulfitobacter Sulfitobacter mediterraneus] and a 96.5% identical sequence to [http://en.wikipedia.org/wiki/Staleya Staleya guttiformis]. Thus, no other closely related microbes are known, thus supporting the discovery of a new genus and species. Analysis of the genome for <del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>indicates 60% G+C content of the DNA.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>contains one circular chromosome. The whole genome has not yet been sequence. The complete sequence of the 16S rRNA gene of <ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>has a 97.4% identical sequence to [http://en.wikipedia.org/wiki/Sulfitobacter Sulfitobacter mediterraneus] and a 96.5% identical sequence to [http://en.wikipedia.org/wiki/Staleya Staleya guttiformis]. Thus, no other closely related microbes are known, thus supporting the discovery of a new genus and species. Analysis of the genome for <ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>indicates 60% G+C content of the DNA.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell and colony structure==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell and colony structure==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>is a gram-negative bacterium with irregular rod shaped single cells. The rod cells have slightly swollen ends. The cells range in length from 3-5 μm and in width from 1.8-2.5 μm. <del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>forms white colored colonies with a characteristic shiny surface. The bacterium consists of white [http://en.wikipedia.org/wiki/Inclusion_body inclusion bodies] that are not gas vesicles. These storage granules stain black with Sudan Black stain suggesting they contain [http://en.wikipedia.org/wiki/Polyhydroxybutyrate poly-β-hydroxybutyrate], a common bacterial storage compound.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>is a gram-negative bacterium with irregular rod shaped single cells. The rod cells have slightly swollen ends. The cells range in length from 3-5 μm and in width from 1.8-2.5 μm. <ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>forms white colored colonies with a characteristic shiny surface. The bacterium consists of white [http://en.wikipedia.org/wiki/Inclusion_body inclusion bodies] that are not gas vesicles. These storage granules stain black with Sudan Black stain suggesting they contain [http://en.wikipedia.org/wiki/Polyhydroxybutyrate poly-β-hydroxybutyrate], a common bacterial storage compound.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Metabolism==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Metabolism==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>is an [http://en.wikipedia.org/wiki/Obligate_aerobe obligate aerobe], non-fermentative bacterium that requires oxygen to grow. The bacterium is a heterotroph that utilizes D-glucose, pyruvate, DL- lactate, serine, ornithine, alanine, asparagine, L-aspartate, L-glutamate, L-proline, succinate, mannitol, adipate, malate, citrate and glycerol as its carbon source and external electron donor reductant sources. <del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>contains Q10 (uibiquinone 10) as its dominant respiratory [http://en.wikipedia.org/wiki/Quinone quinone] in the electron transport chain to aid in ATP synthesis. Q10 is specific to members of Alphaproteobacteria class. <del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>does not hydrolyze gelatin, starch, urea, or aesculin. The bacterium tested slightly positive for the presence of [http://en.wikipedia.org/wiki/Cytochrome_c_oxidase cytochrome oxidase] a transmembrane protein complex in the electron transport chain that transfers electrons to oxygen and translocates four protons per electron to help create a gradient for ATP synthesis. <del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>does not reduce nitrate to nitrite. The bacterium produces indole, cyclic dipeptides, and thryptanthrin.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>is an [http://en.wikipedia.org/wiki/Obligate_aerobe obligate aerobe], non-fermentative bacterium that requires oxygen to grow. The bacterium is a heterotroph that utilizes D-glucose, pyruvate, DL- lactate, serine, ornithine, alanine, asparagine, L-aspartate, L-glutamate, L-proline, succinate, mannitol, adipate, malate, citrate and glycerol as its carbon source and external electron donor reductant sources. <ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>contains Q10 (uibiquinone 10) as its dominant respiratory [http://en.wikipedia.org/wiki/Quinone quinone] in the electron transport chain to aid in ATP synthesis. Q10 is specific to members of Alphaproteobacteria class. <ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>does not hydrolyze gelatin, starch, urea, or aesculin. The bacterium tested slightly positive for the presence of [http://en.wikipedia.org/wiki/Cytochrome_c_oxidase cytochrome oxidase] a transmembrane protein complex in the electron transport chain that transfers electrons to oxygen and translocates four protons per electron to help create a gradient for ATP synthesis. <ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>does not reduce nitrate to nitrite. The bacterium produces indole, cyclic dipeptides, and thryptanthrin.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>has optimum growth from 25-30°C but can grow in a range all the way down to 8°C. The bacterium’s optimum growth occurs at a pH of 7 but it can tolerate a range from 7-9. The optimum salts concentration for growth is 3-5% and the halotolerance range is from 1-10%. <del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>does not grow in medium lacking salts or in medium containing only sodium chloride.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>has optimum growth from 25-30°C but can grow in a range all the way down to 8°C. The bacterium’s optimum growth occurs at a pH of 7 but it can tolerate a range from 7-9. The optimum salts concentration for growth is 3-5% and the halotolerance range is from 1-10%. <ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>does not grow in medium lacking salts or in medium containing only sodium chloride.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Pathology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Pathology==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>has no known pathogenic effects on humans. The bacterium does have genes coding for [http://en.wikipedia.org/wiki/Beta-lactamase β-lactamases] indicating resistance to β-lactam antibiotics like penicillins, cephamycins, and carbapenems. <del style="font-weight: bold; text-decoration: none;">"</del>Oceanibulbus indolifex<del style="font-weight: bold; text-decoration: none;">" </del>is susceptible to aminoglycosides, antibiotics derived from bacteria of the genus Streptomyces that interfere with bacterial ribosome function.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>has no known pathogenic effects on humans. The bacterium does have genes coding for [http://en.wikipedia.org/wiki/Beta-lactamase β-lactamases] indicating resistance to β-lactam antibiotics like penicillins, cephamycins, and carbapenems. <ins style="font-weight: bold; text-decoration: none;">''</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">'' </ins>is susceptible to aminoglycosides, antibiotics derived from bacteria of the genus Streptomyces that interfere with bacterial ribosome function.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td></tr>
</table>
Kaplanar
https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&diff=73346&oldid=prev
Kaplanar at 16:33, 3 May 2012
2012-05-03T16:33:49Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 16:33, 3 May 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and significance==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and significance==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Image:Screen_shot_2012-04-26_at_AM.png|frame|right|150px|This light microscope image shows the swollen end, rod shaped cells of Oceanibulbus indolifex [[http://ijs.sgmjournals.org/content/54/4/1177.full.pdf+html]]]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Image:Screen_shot_2012-04-26_at_AM.png|frame|right|150px|This light microscope image shows the swollen end, rod shaped cells of Oceanibulbus indolifex [[http://ijs.sgmjournals.org/content/54/4/1177.full.pdf+html]]]]</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Oceanibulbus indolifex is a rod shaped, [http://en.wikipedia.org/wiki/Gram-negative gram-negative] [http://en.wikipedia.org/wiki/Proteobacteria proteobacteria] that forms shiny, white colonies and is not known to be pathogenic to humans. The bacterium was referred to as HEL-45T before it was discovered to be a new species. The bacterium was discovered on September 23, 1998 on the North Sea at 54° 08’ N 7° 52’ E. The sample was taken 2 km from the island of Helgoland at a depth of 10 m. This bacterium is significant because it marks the discovery of a new aerobic species of bacterium that thrives well below the ocean surface.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>is a rod shaped, [http://en.wikipedia.org/wiki/Gram-negative gram-negative] [http://en.wikipedia.org/wiki/Proteobacteria proteobacteria] that forms shiny, white colonies and is not known to be pathogenic to humans. The bacterium was referred to as HEL-45T before it was discovered to be a new species. The bacterium was discovered on September 23, 1998 on the North Sea at 54° 08’ N 7° 52’ E. The sample was taken 2 km from the island of Helgoland at a depth of 10 m. This bacterium is significant because it marks the discovery of a new aerobic species of bacterium that thrives well below the ocean surface.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome structure==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Genome structure==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Oceanibulbus indolifex contains one circular chromosome. The whole genome has not yet been sequence. The complete sequence of the 16S rRNA gene of Oceanibulbus indolifex has a 97.4% identical sequence to [http://en.wikipedia.org/wiki/Sulfitobacter Sulfitobacter mediterraneus] and a 96.5% identical sequence to [http://en.wikipedia.org/wiki/Staleya Staleya guttiformis]. Thus, no other closely related microbes are known, thus supporting the discovery of a new genus and species. Analysis of the genome for Oceanibulbus indolifex indicates 60% G+C content of the DNA.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>contains one circular chromosome. The whole genome has not yet been sequence. The complete sequence of the 16S rRNA gene of <ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>has a 97.4% identical sequence to [http://en.wikipedia.org/wiki/Sulfitobacter Sulfitobacter mediterraneus] and a 96.5% identical sequence to [http://en.wikipedia.org/wiki/Staleya Staleya guttiformis]. Thus, no other closely related microbes are known, thus supporting the discovery of a new genus and species. Analysis of the genome for <ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>indicates 60% G+C content of the DNA.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell and colony structure==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Cell and colony structure==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Oceanibulbus indolifex is a gram-negative bacterium with irregular rod shaped single cells. The rod cells have slightly swollen ends. The cells range in length from 3-5 μm and in width from 1.8-2.5 μm. Oceanibulbus indolifex forms white colored colonies with a characteristic shiny surface. The bacterium consists of white [http://en.wikipedia.org/wiki/Inclusion_body inclusion bodies] that are not gas vesicles. These storage granules stain black with Sudan Black stain suggesting they contain [http://en.wikipedia.org/wiki/Polyhydroxybutyrate poly-β-hydroxybutyrate], a common bacterial storage compound.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>is a gram-negative bacterium with irregular rod shaped single cells. The rod cells have slightly swollen ends. The cells range in length from 3-5 μm and in width from 1.8-2.5 μm. <ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>forms white colored colonies with a characteristic shiny surface. The bacterium consists of white [http://en.wikipedia.org/wiki/Inclusion_body inclusion bodies] that are not gas vesicles. These storage granules stain black with Sudan Black stain suggesting they contain [http://en.wikipedia.org/wiki/Polyhydroxybutyrate poly-β-hydroxybutyrate], a common bacterial storage compound.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Metabolism==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Metabolism==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Oceanibulbus indolifex is an [http://en.wikipedia.org/wiki/Obligate_aerobe obligate aerobe], non-fermentative bacterium that requires oxygen to grow. The bacterium is a heterotroph that utilizes D-glucose, pyruvate, DL- lactate, serine, ornithine, alanine, asparagine, L-aspartate, L-glutamate, L-proline, succinate, mannitol, adipate, malate, citrate and glycerol as its carbon source and external electron donor reductant sources. Oceanibulbus indolifex contains Q10 (uibiquinone 10) as its dominant respiratory [http://en.wikipedia.org/wiki/Quinone quinone] in the electron transport chain to aid in ATP synthesis. Q10 is specific to members of Alphaproteobacteria class. Oceanibulbus indolifex does not hydrolyze gelatin, starch, urea, or aesculin. The bacterium tested slightly positive for the presence of [http://en.wikipedia.org/wiki/Cytochrome_c_oxidase cytochrome oxidase] a transmembrane protein complex in the electron transport chain that transfers electrons to oxygen and translocates four protons per electron to help create a gradient for ATP synthesis. Oceanibulbus indolifex does not reduce nitrate to nitrite. The bacterium produces indole, cyclic dipeptides, and thryptanthrin.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>is an [http://en.wikipedia.org/wiki/Obligate_aerobe obligate aerobe], non-fermentative bacterium that requires oxygen to grow. The bacterium is a heterotroph that utilizes D-glucose, pyruvate, DL- lactate, serine, ornithine, alanine, asparagine, L-aspartate, L-glutamate, L-proline, succinate, mannitol, adipate, malate, citrate and glycerol as its carbon source and external electron donor reductant sources. <ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>contains Q10 (uibiquinone 10) as its dominant respiratory [http://en.wikipedia.org/wiki/Quinone quinone] in the electron transport chain to aid in ATP synthesis. Q10 is specific to members of Alphaproteobacteria class. <ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>does not hydrolyze gelatin, starch, urea, or aesculin. The bacterium tested slightly positive for the presence of [http://en.wikipedia.org/wiki/Cytochrome_c_oxidase cytochrome oxidase] a transmembrane protein complex in the electron transport chain that transfers electrons to oxygen and translocates four protons per electron to help create a gradient for ATP synthesis. <ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>does not reduce nitrate to nitrite. The bacterium produces indole, cyclic dipeptides, and thryptanthrin.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Ecology==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Oceanibulbus indolifex has optimum growth from 25-30°C but can grow in a range all the way down to 8°C. The bacterium’s optimum growth occurs at a pH of 7 but it can tolerate a range from 7-9. The optimum salts concentration for growth is 3-5% and the halotolerance range is from 1-10%. Oceanibulbus indolifex does not grow in medium lacking salts or in medium containing only sodium chloride.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>has optimum growth from 25-30°C but can grow in a range all the way down to 8°C. The bacterium’s optimum growth occurs at a pH of 7 but it can tolerate a range from 7-9. The optimum salts concentration for growth is 3-5% and the halotolerance range is from 1-10%. <ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>does not grow in medium lacking salts or in medium containing only sodium chloride.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Pathology==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Pathology==</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Oceanibulbus indolifex has no known pathogenic effects on humans. The bacterium does have genes coding for [http://en.wikipedia.org/wiki/Beta-lactamase β-lactamases] indicating resistance to β-lactam antibiotics like penicillins, cephamycins, and carbapenems. Oceanibulbus indolifex is susceptible to aminoglycosides, antibiotics derived from bacteria of the genus Streptomyces that interfere with bacterial ribosome function.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>has no known pathogenic effects on humans. The bacterium does have genes coding for [http://en.wikipedia.org/wiki/Beta-lactamase β-lactamases] indicating resistance to β-lactam antibiotics like penicillins, cephamycins, and carbapenems. <ins style="font-weight: bold; text-decoration: none;">"</ins>Oceanibulbus indolifex<ins style="font-weight: bold; text-decoration: none;">" </ins>is susceptible to aminoglycosides, antibiotics derived from bacteria of the genus Streptomyces that interfere with bacterial ribosome function.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td></tr>
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Kaplanar
https://microbewiki.kenyon.edu/index.php?title=Oceanibulbus_indolifex&diff=73331&oldid=prev
Kaplanar: /* Species */
2012-05-03T15:24:10Z
<p><span dir="auto"><span class="autocomment">Species</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 15:24, 3 May 2012</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex''</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>''Oceanibulbus indolifex''</div></td></tr>
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<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>NCBI [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi taxonomy]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>NCBI [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi<ins style="font-weight: bold; text-decoration: none;">?mode=Info&id=225422&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock </ins>taxonomy]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and significance==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Description and significance==</div></td></tr>
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Kaplanar