Photobacterium leiognathi

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The Microbial Biorealm


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A Microbial Diversity Resource


Authors

Ryo Tashiro '09, Molly Schlemmer '08, Shrochis Karki '09, Allison Whipple '06, Zeva Levine1, Laura Damon-Moore1,
Ariel Kahrl2, Hannah Sacks '08, Michael Stulberg '05, Casey M. Smith '06, and Shana Scogin '07


Advisor: Joan Slonczewski, Biology Dept, Kenyon College
Guest authors from 1Beloit;2Oberlin
Funded by
HHMI awards to Kenyon College, 2000, 2004

Review from Focus on Microbiology Education
Jennifer L. Taylor, authors. Licensed for use, ASM MicrobeLibrary

Recommended Sites:
NCBI Taxonomy
NCBI Microbial Genomes
The Prokaryotes: An Evolving Electronic Resource
LBSN List of Bacterial Names
MB409 Microbial Diversity

Science
- PNAS - ASM Journals - Nature

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Disclaimer. Information on this site is provided solely for educational purposes. Medical questions should be referred to a physician.

Microbial Descriptions and Taxonomy
Within each Domain these ranks are shown:
Division, Order, Genus
Links provide full taxonomy and description.


Bacteria

Archaea

Eukarya

  • Actinobacteria
    • Actinomycetales
      • Arthrobacter
      • Corynebacterium
      • Frankia
      • Micrococcus
      • Mycobacterium
      • Propionibacterium
      • Streptomyces
    • Bifidobacteriales
      • Bifidobacterium
  • Aquificae
    • Aquificales
      • Aquifex
  • Bacteroidetes/Chlorobi group
    • Bacteroidales
      • Bacteroides
      • Porphyromonas
    • Chlorobiales
      • Chlorobium
    • Flavobacteriales
      • Flavobacterium
  • Chlamydiae/Verrucomicrobia
    • Chlamydiales
      • Chlamydia
    • Verrucomicrobiales
      • Prosthecobacter
      • Verrucomicrobium
  • Chloroflexi
    • Chlorflexales
      • Chloroflexus
  • Cyanobacteria
    • Chloroplast
    • Chroococcales
      • Chroococcus
      • Merismopedia
      • Synechococcus
    • Nostocales
      • Anabaena
      • Nostoc
    • Oscillatoriales
      • Spirulina
      • Trichodesmium
    • Pleurocapsales
      • Pleurocapsa
    • Prochlorophytes
      • Prochlorococcus
      • Prochloron
  • Firmicutes (Gram positive)
    • Bacillales
      • Bacillus
      • Listeria
      • Staphylococcus
    • Clostridiales
      • Clostridium
      • Dehalobacter
      • Epulopiscium
      • Ruminococcus
    • Lactobacillales
      • Enterococcus
      • Lactobacillus
      • Streptococcus
    • Mollicutes
      • Mycoplasma

  • Nitrospirae
    • Nitrospirales
      • Leptospirillum
      • Nitrospira
      • Thermodesulfo-bacterium
  • Planctomycetes
    • Planctomycetales
      • Gemmata
      • Pirellula
      • Planctomyces
  • Proteobacteria (Alpha)
    • Caulobacterales
      • Caulobacter
    • Rhizobiales
      • Agrobacterium
      • Bradyrhizobium
      • Brucella
      • Methylobacterium
      • Prosthecomicrobium
      • Rhizobium
      • Rhodopseudomonas
      • Sinorhizobium
    • Rhodobacterales
      • Rhodobacter
      • Roseobacter
    • Rhodospirales
      • Acetobacter
      • Rhodospirillum
    • Rickettsiales
      • Rickettsia
      • Mitochondria
      • Wolbachia
    • Sphingomonadales
      • Erythrobacter
      • Erythromicrobium
      • Sphingomonas
  • Proteobacteria (Beta)
    • Burkholderiales
      • Alcaligenes
      • Burkholderia
      • Leptothrix
      • Sphaerotilus
    • Hydrogenophilales
      • Thiobacillus
    • Neisseriales
      • Neisseria
    • Nitrosomonadales
      • Nitrosomonas
      • Gallionella
      • Spirillum
    • 'Rhodocyclales'
      • Azoarcus
  • Proteobacteria (Gamma)
    • Aeromonadales
      • Aeromonas
      • Succinomonas
      • Succinivibrio
      • Ruminobacter
    • Chromatiales
      • Nitrosococcus
      • Thiocapsa
    • Enterobacteriales
      • Enterobacter
      • Escherichia
      • Klebsiella
      • Salmonella
      • Wigglesworthia
      • Yersinia
    • Legionellales
      • Coxiella
      • Legionella
    • Oceanospirales
      • Halomonas
    • Pasteurellales
      • Pasteurella
    • Pseudomonadales
      • Acinetobacter
      • Azotobacter
      • Pseudomonas
      • Psychrobacter
    • Thiotrichales
      • Beggiatoa
      • Thiomargarita
    • Vibrionales
      • Vibrio
    • Xanthomonadales
      • Xanthomonas
  • Proteobacteria (Delta/Epsilon)
    • Campylobacterales
      • Campylobacter
      • Helicobacter
    • Myxococcales
      • Myxococcus
    • Desulfobacterales
      • '''Desulfosarcina'''
    • Desulfuromonadales
      • Geobacter
      • Desulfuromonas
  • Spirochaetes
    • Spirochaetales
      • Borrelia
      • Leptospira
      • Treponema
  • Thermotogae
    • Thermotogales
      • Petrotoga
      • Thermotoga
  • Thermus/Deinococcus group
    • Deinococcales
      • Deinococcus
    • Thermales
      • Thermus
  • Crenarchaeota
    • Desulfurococcales
      • Aeropyrum
      • Desulfurococcus
      • Pyrodictium
      • Ignicoccus
      • Thermosphaera
    • Sulfolobales
      • Sulfolobus
    • Thermoproteales
      • Thermoproteus
  • Euryarchaeota
    • Archaeoglobales
      • Archaeoglobus
    • Haloarchaea (Halobacteriales)
      • Haloarcula
      • Halobacterium
      • Halococcus
      • Haloferax
      • Natronococcus
      • Natronomonas
    • Methanobacteriales
      • Methanothermobacter
      • Methanosphaera
    • Methanococcales
      • Methanococcus
      • Methanoculleus
    • Methanosarcinales
      • Methanosarcina
    • Methanopyrales
      • Methanopyrus
    • Thermococcales
      • Pyrococcus
      • Thermococcus
    • Thermoplasmatales
      • Ferroplasma
      • Picrophilus
      • Thermoplasma
    • Thermoproteales
      • Pyrobaculum
  • Korarchaeota
  • Nanoarchaeota
      • Nanoarchaeum

Opisthokonta

  • Metazoa (multicellular animals)
  • Choanoflagellata
  • Fungi (Eumycota, true fungi)
    • Ascomycota
      • Aspergillus
      • Magnaporthe
      • Morchella
      • Neurospora
      • Penicillium
      • Saccharomyces
    • Basidiomycota
      • Cryptococcus
    • Chytridiomycota
    • Microsporidia
    • Zygomycota

Viridiplantae (algae & plant)

  • Multicellular Plants
  • Charophyta
  • Chlorophyta
  • Rhodophyta

Amebozoa

  • Amebas
  • Pelobionta
  • Myxomycota (slime molds)
    • Dictyosteliida
    • Myxogastria (myxomycetes)
    • Protostelida

'Cercozoa (shelled amebas)'

  • 'Foraminifera'
  • 'Radiolaria'
  • 'Euglyphids'

Alveolata (have cortical alveoli)

  • Ciliophora
    • Didinium
    • Paramecium
    • Stentor
    • Suctoria
    • Vorticella
  • Dinoflagellata
    • Alexandrium
    • Ceratium
    • Pfiesteria
    • Zooxanthellae
  • Apicomplexa
    • Piroplasmida
      • Babesia
    • Haemosporida
      • Leukocytozoon
      • Plasmodium
    • Coccidia
      • Cryptosporidium
      • Cyclospora
      • Sarcocystis

Marine flagellates (other)Heterokonta (Stramenopiles)

  • Bicosoecids
  • ' Chrysophyta'
  • Actinophrydae
  • Bacillariophyta (diatoms)
  • Chrysophyceae
  • Xanthophyceae
  • Oomycota
  • Labyrinthulids
  • Opalinids
  • Phaeophyceae (kelp)
  • Haptophytes
    • Emiliania

Discicristata

  • Acrasids
  • Euglenozoa
  • Trypanosoma
    • Trypanosoma
    • Leishmania

Excavata

  • Diplomonads
    • Giardia
  • Oxymonads
  • Parabasalids
    • Mixotricha
    • Trichomonas
  • Retortamonads

Emerging Eukaryotes

  • Nano- and Picoeukaryotes