Prairie Soils: Difference between revisions

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[[Image:Mollisol.NRCS.jpg|thumb|300px|right|[http://soils.usda.gov/technical/classification/orders/mollisols.html Mollisol Profile] provided by the NRCS]]
==Introduction==
==Introduction==
[[Image:PHIL_1181_lores.jpg|thumb|300px|right|Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the CDC.]]
Prairie soils make up approximately 6.9% of the worlds ice-free global land, and 21% of land in the United States (Buol et al.). These soils are classified by the USDA as Mollisols. Mollisols are dark fertile soils that are formed from the accumulation organic matter produced by dense root systems of prairie grasses (Brady and Weil). The majority of Mollisols are found in temperate climates with variable seasonal environments (Borchert). Fire is also an important in maintaining the grasslands that fuel the organic breakdown of the carbon rich areas (Buol et al.).
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These rich Prairie soils play the largest role for human use in conventional agriculture. This demand for agricultural production has left few Mollisols uncultivated around the world (Brady and Weil). Historically the combination of grasses and microbes in this environment has helped create a habitat that humans have preferred for cultivation for thousands of years.  
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Microorganisms in prairie grass environments are responsible for the high amount of organic matter, and consequently the high productivity that is obtained in cultivation. Mollisols have high levels of carbon, nitrogen, and phosphorus.
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<br><b>Legend/credit:</b> Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the CDC.
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==Physical environment==
-Prof Kent
[[Image:Big Bluestem Prairie.jpg|thumb|300px|right|[http://www.museum.state.il.us/exhibits/symbols/grass.html Big Bluestem Prairie] in Illinois]]
===Vegetation===
Prairie soils are covered by a variety of grasses ranging from short grass steppe species to tall grass species. Short grasses typically resemble  monoculture meadows not normally exceeding 30cm in height. Tall grass prairies are less uniform and caintain grasses growing to heights of 1-3 meters. Vegetation cover is highly dependent on moisture regime in the area. Taller grasses require more moisture (Buol et al.). The root systems of these grasses are dense and are many time symbiotic with fungi. These fungi are high in nitrogen, and when this fungi is decomposed it enriches the soil.


In the introduction, briefly describe the habitat that is the topic of this page. Introduce the habitat, its ecological significance, and the importance of microorganisms in this environment. (What processes do they carry out? What functions do they perform?)
===Soil Composition===
[http://en.wikipedia.org/wiki/Mollisols Mollisols] are rich due to the accelatraed decompostion of organic matter. These soils have a thick, dark, soft  mollic epipedon. These soils are composed of wind blown silts or sands that are high in calcarious material. The vegetation type, specifically prairie grasses, help keep organic matter high, and is usually based on different moisture regimes in a given area (Brady and Weil).


==Physical environment==
==Microbial Processes==
Describe the physical and chemical characteristics of the environment, using as many sections/subsections as you require. If it is appropriate, you can divide the physical and chemical attributes of the environment into separate sections. Look at other topics available in MicrobeWiki. Which involve processes similar to yours? Create links where relevant.


===Subsection 1===
===[http://en.wikipedia.org/wiki/Decomposition#Plant_decomposition Decomposition]===
====Subsection 1a====
Soil microbes are very productive under prairie soils. The extensive grass coverage, along with dense root systems and fungal mats allow an ample supply of organic matter to break down into various nutrients. The temperate location of this environment also produces a large amount of litter when grasses die in winter months.
====Subsection 1b====
===Subsection 2===


===[http://en.wikipedia.org/wiki/Carbon_Cycle Carbon Cycle]===
Carbon is recycled back into the soil through decomposition. Microbes breakdown and utilized soluble components and proteins from organic material. Microbes break down different materials at different rates. For example [http://en.wikipedia.org/wiki/Cellulose Cellulose] is more easily decomposed compared to [http://en.wikipedia.org/wiki/Lignin Lignin]. The two major end product in the carbon cycle after decomposition is carbon dioxide and microbial biomass (Sylvia et al.)This helps account for the high amounts of carbon and [http://en.wikipedia.org/wiki/Soil_organic_matter Soil Organic Matter] in prairie soils.
[[Image:Nitrogen cycle.jpg|thumb|300px|right|Microbes drive the [http://www.enviroliteracy.org/article.php/479.html nitrogen cycle diagram]]]


==Microbial communities==
===[http://en.wikipedia.org/wiki/Nitrogen_cycle Nitrogen Cycle]===
What kind of microbes do we typically find in this environment? Or associated with important processes in this environment? Describe key groups of microbes that we find in this environment, and any special adaptations they may have evolved to survive in this environment.  
The Nitrogen cycle is also another key reason why prairie soils are very rich and productive. Microbes are responsible for both nitrogen mineralization and immobilization. Both processes regulate the amount of available nitrogen that is in the soil.  
List examples of specific microbes that represent key groups or are associated with important processes found in this environment. Link to other MicrobeWiki pages where possible.
Some bacteria are also able to fix nitrogen through [http://en.wikipedia.org/wiki/Nitrogen_fixation Nitrogen Fixation], and use dinitrogen from the atmosphere as a nitrogen source.


Are there important biological interactions that are important in this environment? Do these interactions influence microbial populations and their activities? How do these interactions influence other organisms? Describe biological interactions that might take place in this environment, using as many sections/subsections as you require. Look at other topics available in MicrobeWiki. Create links where relevant.
==Microbial Communities==


===Subsection 1===
===Zymogenous Organisms===
====Subsection 1a====
Zymogenous organisms are very important in breaking down soluble organic matter in soils (Sylvia et al.). These organisms are R strategist species, most commonly bacilli, that are suited to environments with high organic matter that is easy to break down (Killham 1994). This breakdown is essential to create and sustain a prairie environment, and these organisms would less abundant in other soil types with less organic input.
====Subsection 1b====
===Subsection 2===


==Microbial processes==
===Nitrogen fixing bacteria===
What microbial processes define this environment? Describe microbial processes that are important in this habitat, adding sections/subsections as needed. Look at other topics in MicrobeWiki. Are some of these processes already described? Create links where relevant.
These bacteria add nitrogen to the soil system by converting atmospheric Nitrogen to Ammonia.This process is restricted to [http://en.wikipedia.org/wiki/Prokaryotes prokaryotes]. Some of these bacteria include [http://en.wikipedia.org/wiki/Cyanobacteria cyanobacteria] and [http://en.wikipedia.org/wiki/Actinomycetes actinomycetes], but close to 1000 varieties of bacteria fix nitrogen (Sylvia et al.).


===Subsection 1===
===[[Plant endophyte]]===
====Subsection 1a====
Endopytes work directly with grasses, and in turn to help make prairie soils. These microorganisms form symbiotic relationships with the plant host. Endophytes are both fungi and bacteria. Endophytes typically inhabit the above ground portion of the plant, and are mot mycorrhizal fungi in the soil matrix.
====Subsection 1b====
[[Image:Mykorrhizae wurzel.jpg|thumb|300px|right|[http://www.mrcashop.org/mushroom_shop/mycorrhizae-c-46.html] side view of mycorrhizae functioning in the soil]]
===Subsection 2===
===[[Mycorrhizae]]===
Mycorrhizae literally translated means fungus root, and was first described by german scientist A.D. Frank in 1885. Mycorrhizae is simply a symbiotic relationship between plant roots and fungus. This relationship includes ectomycorrhizae, mainly [http://en.wikipedia.org/wiki/Basidiomycetes basidiomycetes],  and arbuscular mycorrhizae (Sylvia et al.). Mycorrhizae can have positive or negative effects on the host plant. Mycorrhizae also increase the amount of organic carbon in the soil systems, along with soil structure. In Prairie soils Mycorrhizae work extensively with grasses to establish dense mats that are critical in the maintenance of the soil.


==Current Research==
==Current Research==


Enter summaries of recent research here--at least three required
==="Synthetic nitrogen fertilizers deplete soil nitrogen: a global dilemma for sustainable cereal production"===
Dr. Mulvaney et al. suggest that agricultural soils are being depleted of their soil organic matter because of increased, and sustained, application of fertilizers. Furthermore, The article argues continuous and increased nitrogen application is increasing microbial decomposition of organic matter at an alarming rate, and will be reflected on the global level. This problem may be fixed if soils were aloud a rest, and native grasses were allowed to inhabit an area again (Brady and Weil). In reality now managed prairie soils are in danger of a slow change to less productive soils.


==="Distribution of Amino Sugars in Mollisols in the Northeast of China"===
Research in Northeast China looked into pools of amino acids in different temperate regions, and what types of microbes are present and responsible for different pool sizes. The research concluded that in prime agricultural lands amino acids were derived from bacterial sources. This research helps when trying to understand why prairie soils are so productive. The main reason is the microbes in the soil, working with certain plants is certain environments. This study also underlies the great importance of bacteria in soil systems (sylvia et al.).
===[http://journals.uzpi.cz/publicFiles/00154.pdf "Biomass and catabolic diversity of microbial communities with long-term restoration, bare fallow and cropping history in Chinese Mollisols"]===
Wang et al. studied microbe function under different treatments on Mollisols in China. The study found that microbes were in largest abundance under soils that were restored to a natural prairie state compared to regularly cultivated soils. This study comparing restored sites to cultivated sites helps solidify the ideas that soil microbe environment is great under prairie grasses, and that this large microbial population helps make prairie soils so productive (Brady and Weil).
===
==References==
==References==
[http://journals.uzpi.cz/publicFiles/00154.pdf G.H. Wang, J. Jin, X.L. Chen, J.D. Liu, X.B. Liu, S.J. Herbert. 2007. "Biomass and catabolic diversity of microbial communities with long-term restoration, bare fallow and cropping history in Chinese Mollisol". Plant Soil Environ. 53: 177–185.]
[http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=5162650 X. Hongtu, B. Zhen, H. Hongbo, Z. Xudong, W. Xiaoying. 2009. "Distribution of Amino Sugars in Mollisols in the Northeast of China" Bioinformatics and Biomedical Engineering 1-4.]
[http://www.lawrieco.com.au/uploaded_files/document_uploads/PublisherUploads/Documents/Library/Nitrogen_Phosphorus/2009_Synthetic_Nitrogen_Fertilisers_Deplete_SoilN_Mulvaneyetal.pdf R. L. Mulvaney, S. A. Khan, and T. R. Ellsworth. 2009. "Synthetic Nitrogen Fertilizers Deplete Soil Nitrogen: A Global Dilemma for Sustainable
Cereal Production" Journal of Environmental Quality.  38  Nov.–Dec.]
D. Sylvia, J.fuhrmann, P. Hartel, D. Zuberer. 2004. <i>Principles and Applications of Soil Microbiology, 2nd edition</i>. Upper Saddle River, N.J. Pearson Prentice Hall.
S. Buol, R.J. Southard, R.C. Graham, P.A.McDaniel. 2003. <i>Soil Genesis and Classification, 5th edition</i> Ames, Iowa. A Blackwell Publishing Company.
N Brady. R. Weil. 2002. <i>Elements of The nature and Properties of Soils, 2nd edition</i> Upper Saddle River, N.J. Pearson Prentice Hall.


[Sample reference] [http://ijs.sgmjournals.org/cgi/reprint/50/2/489 Takai, K., Sugai, A., Itoh, T., and Horikoshi, K. "''Palaeococcus ferrophilus'' gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". ''International Journal of Systematic and Evolutionary Microbiology''. 2000. Volume 50. p. 489-500.]
K. Killham. 1994. <i>Soil Ecology</i> Cambridge. Cambridge University Press.  


Edited by <your name>, a student of Angela Kent at the University of Illinois at Urbana-Champaign.
Edited by Morgan Davis, a student of Angela Kent at the University of Illinois at Urbana-Champaign.


<!-- Do not edit or remove this line -->[[Category:Pages edited by students of Angela Kent at the University of Illinois at Urbana-Champaign]]
<!-- Do not edit or remove this line -->[[Category:Pages edited by students of Angela Kent at the University of Illinois at Urbana-Champaign]]

Latest revision as of 12:27, 22 April 2011

This student page has not been curated.
Mollisol Profile provided by the NRCS

Introduction

Prairie soils make up approximately 6.9% of the worlds ice-free global land, and 21% of land in the United States (Buol et al.). These soils are classified by the USDA as Mollisols. Mollisols are dark fertile soils that are formed from the accumulation organic matter produced by dense root systems of prairie grasses (Brady and Weil). The majority of Mollisols are found in temperate climates with variable seasonal environments (Borchert). Fire is also an important in maintaining the grasslands that fuel the organic breakdown of the carbon rich areas (Buol et al.). These rich Prairie soils play the largest role for human use in conventional agriculture. This demand for agricultural production has left few Mollisols uncultivated around the world (Brady and Weil). Historically the combination of grasses and microbes in this environment has helped create a habitat that humans have preferred for cultivation for thousands of years. Microorganisms in prairie grass environments are responsible for the high amount of organic matter, and consequently the high productivity that is obtained in cultivation. Mollisols have high levels of carbon, nitrogen, and phosphorus.

Physical environment

Vegetation

Prairie soils are covered by a variety of grasses ranging from short grass steppe species to tall grass species. Short grasses typically resemble monoculture meadows not normally exceeding 30cm in height. Tall grass prairies are less uniform and caintain grasses growing to heights of 1-3 meters. Vegetation cover is highly dependent on moisture regime in the area. Taller grasses require more moisture (Buol et al.). The root systems of these grasses are dense and are many time symbiotic with fungi. These fungi are high in nitrogen, and when this fungi is decomposed it enriches the soil.

Soil Composition

Mollisols are rich due to the accelatraed decompostion of organic matter. These soils have a thick, dark, soft mollic epipedon. These soils are composed of wind blown silts or sands that are high in calcarious material. The vegetation type, specifically prairie grasses, help keep organic matter high, and is usually based on different moisture regimes in a given area (Brady and Weil).

Microbial Processes

Decomposition

Soil microbes are very productive under prairie soils. The extensive grass coverage, along with dense root systems and fungal mats allow an ample supply of organic matter to break down into various nutrients. The temperate location of this environment also produces a large amount of litter when grasses die in winter months.

Carbon Cycle

Carbon is recycled back into the soil through decomposition. Microbes breakdown and utilized soluble components and proteins from organic material. Microbes break down different materials at different rates. For example Cellulose is more easily decomposed compared to Lignin. The two major end product in the carbon cycle after decomposition is carbon dioxide and microbial biomass (Sylvia et al.)This helps account for the high amounts of carbon and Soil Organic Matter in prairie soils.

Microbes drive the nitrogen cycle diagram

Nitrogen Cycle

The Nitrogen cycle is also another key reason why prairie soils are very rich and productive. Microbes are responsible for both nitrogen mineralization and immobilization. Both processes regulate the amount of available nitrogen that is in the soil. Some bacteria are also able to fix nitrogen through Nitrogen Fixation, and use dinitrogen from the atmosphere as a nitrogen source.

Microbial Communities

Zymogenous Organisms

Zymogenous organisms are very important in breaking down soluble organic matter in soils (Sylvia et al.). These organisms are R strategist species, most commonly bacilli, that are suited to environments with high organic matter that is easy to break down (Killham 1994). This breakdown is essential to create and sustain a prairie environment, and these organisms would less abundant in other soil types with less organic input.

Nitrogen fixing bacteria

These bacteria add nitrogen to the soil system by converting atmospheric Nitrogen to Ammonia.This process is restricted to prokaryotes. Some of these bacteria include cyanobacteria and actinomycetes, but close to 1000 varieties of bacteria fix nitrogen (Sylvia et al.).

Plant endophyte

Endopytes work directly with grasses, and in turn to help make prairie soils. These microorganisms form symbiotic relationships with the plant host. Endophytes are both fungi and bacteria. Endophytes typically inhabit the above ground portion of the plant, and are mot mycorrhizal fungi in the soil matrix.

[1] side view of mycorrhizae functioning in the soil

Mycorrhizae

Mycorrhizae literally translated means fungus root, and was first described by german scientist A.D. Frank in 1885. Mycorrhizae is simply a symbiotic relationship between plant roots and fungus. This relationship includes ectomycorrhizae, mainly basidiomycetes, and arbuscular mycorrhizae (Sylvia et al.). Mycorrhizae can have positive or negative effects on the host plant. Mycorrhizae also increase the amount of organic carbon in the soil systems, along with soil structure. In Prairie soils Mycorrhizae work extensively with grasses to establish dense mats that are critical in the maintenance of the soil.

Current Research

"Synthetic nitrogen fertilizers deplete soil nitrogen: a global dilemma for sustainable cereal production"

Dr. Mulvaney et al. suggest that agricultural soils are being depleted of their soil organic matter because of increased, and sustained, application of fertilizers. Furthermore, The article argues continuous and increased nitrogen application is increasing microbial decomposition of organic matter at an alarming rate, and will be reflected on the global level. This problem may be fixed if soils were aloud a rest, and native grasses were allowed to inhabit an area again (Brady and Weil). In reality now managed prairie soils are in danger of a slow change to less productive soils.

"Distribution of Amino Sugars in Mollisols in the Northeast of China"

Research in Northeast China looked into pools of amino acids in different temperate regions, and what types of microbes are present and responsible for different pool sizes. The research concluded that in prime agricultural lands amino acids were derived from bacterial sources. This research helps when trying to understand why prairie soils are so productive. The main reason is the microbes in the soil, working with certain plants is certain environments. This study also underlies the great importance of bacteria in soil systems (sylvia et al.).

"Biomass and catabolic diversity of microbial communities with long-term restoration, bare fallow and cropping history in Chinese Mollisols"

Wang et al. studied microbe function under different treatments on Mollisols in China. The study found that microbes were in largest abundance under soils that were restored to a natural prairie state compared to regularly cultivated soils. This study comparing restored sites to cultivated sites helps solidify the ideas that soil microbe environment is great under prairie grasses, and that this large microbial population helps make prairie soils so productive (Brady and Weil).

=

References

G.H. Wang, J. Jin, X.L. Chen, J.D. Liu, X.B. Liu, S.J. Herbert. 2007. "Biomass and catabolic diversity of microbial communities with long-term restoration, bare fallow and cropping history in Chinese Mollisol". Plant Soil Environ. 53: 177–185.

X. Hongtu, B. Zhen, H. Hongbo, Z. Xudong, W. Xiaoying. 2009. "Distribution of Amino Sugars in Mollisols in the Northeast of China" Bioinformatics and Biomedical Engineering 1-4.

[http://www.lawrieco.com.au/uploaded_files/document_uploads/PublisherUploads/Documents/Library/Nitrogen_Phosphorus/2009_Synthetic_Nitrogen_Fertilisers_Deplete_SoilN_Mulvaneyetal.pdf R. L. Mulvaney, S. A. Khan, and T. R. Ellsworth. 2009. "Synthetic Nitrogen Fertilizers Deplete Soil Nitrogen: A Global Dilemma for Sustainable Cereal Production" Journal of Environmental Quality. 38 Nov.–Dec.]

D. Sylvia, J.fuhrmann, P. Hartel, D. Zuberer. 2004. Principles and Applications of Soil Microbiology, 2nd edition. Upper Saddle River, N.J. Pearson Prentice Hall.

S. Buol, R.J. Southard, R.C. Graham, P.A.McDaniel. 2003. Soil Genesis and Classification, 5th edition Ames, Iowa. A Blackwell Publishing Company.

N Brady. R. Weil. 2002. Elements of The nature and Properties of Soils, 2nd edition Upper Saddle River, N.J. Pearson Prentice Hall.

K. Killham. 1994. Soil Ecology Cambridge. Cambridge University Press.

Edited by Morgan Davis, a student of Angela Kent at the University of Illinois at Urbana-Champaign.