Providencia stuartii: Difference between revisions

From MicrobeWiki, the student-edited microbiology resource
No edit summary
No edit summary
 
(3 intermediate revisions by 2 users not shown)
Line 26: Line 26:
Providencia stuartii is a [https://en.wikipedia.org/wiki/Gram-negative_bacteria gram-negative bacteria].
Providencia stuartii is a [https://en.wikipedia.org/wiki/Gram-negative_bacteria gram-negative bacteria].
[[Image:Negvposbact.jpeg|thumb|300px|right|Figure 2: Visual comparison of gram-negative bacteria and gram-positive bacteria using the gram-staining technique [https://www.niaid.nih.gov/research/gram-negative-bacteria NIAID]]]
[[Image:Negvposbact.jpeg|thumb|300px|right|Figure 2: Visual comparison of gram-negative bacteria and gram-positive bacteria using the gram-staining technique [https://www.niaid.nih.gov/research/gram-negative-bacteria NIAID]]]
In laboratory settings, ,it is best cultured in Nutrient Agar or Columbia agar, with growth best at 37C and a mesophilic temperature range. It is of risk group 2 on the [https://en.wikipedia.org/wiki/Biosafety_level biosafety level][[#References|[5]]].  
In laboratory settings,it is best cultured in Nutrient Agar or Columbia agar, with growth best at 37C and a mesophilic temperature range. It is of risk group 2 on the [https://en.wikipedia.org/wiki/Biosafety_level biosafety level][[#References|[5]]].  


P. stuartii has a straight rod morphology and is typically 0.6-0.8 micrometers by 1.5-2.5 micrometers in size [[#References|[6]]].  
P. stuartii has a straight rod morphology and is typically 0.6-0.8 micrometers by 1.5-2.5 micrometers in size [[#References|[6]]].  
Line 37: Line 37:
In 2011 P. stuartii MRSN 2154 was sequenced using the Roche GS FLX Titanium system with a shotgun rapid ligation library. The sequencing found that P. stuartii MRSN 2154 has a “circular genome of 4,402,109 nucleotides and a G/C (guanine-cytosine) content of 41.27%" (NCBI).
In 2011 P. stuartii MRSN 2154 was sequenced using the Roche GS FLX Titanium system with a shotgun rapid ligation library. The sequencing found that P. stuartii MRSN 2154 has a “circular genome of 4,402,109 nucleotides and a G/C (guanine-cytosine) content of 41.27%" (NCBI).


The P. stuarttii MRSN 2154 genome has 4,194 predicted genes, 75 tRNA genes, and seven rrnoperons (NBCI)
The P. stuarttii MRSN 2154 genome has 4,194 predicted genes, 75 tRNA genes, and seven transoperons (NBCI)


It has two porins, Omp-Pst1 and Omp-Pst2. It primary expressed Omp-pst1 in a rich medium, which is mildly anion selective and more permissive of beta lactam antibiotics. In comparison, Omp-Pst2 has atypical voltage gating behavior and could play a role is charge distribution across the OM (what the heck, look up). When Omp-Pst2 was knocked down, P. stuartii growth was retarded, indicating that this porin plays an important role in development[[#References|[1]]].
It has two porins, Omp-Pst1 and Omp-Pst2. It primary expressed Omp-pst1 in a rich medium, which is mildly anion selective and more permissive of beta lactam antibiotics. In comparison, Omp-Pst2 has atypical voltage gating behavior and could play a role is charge distribution across the outer membrane. When Omp-Pst2 was knocked down, P. stuartii growth was retarded, indicating that this porin plays an important role in development[[#References|[1]]].


==Cell Structure, Metabolism and Life Cycle==
==Cell Structure, Metabolism and Life Cycle==
CELL STRUCTURE
Providencia stuartii has many of the characteristics common to gram-negative bacteria.
Providencia stuartii has a cell envelope. This cell envelope is comprised of a thin peptidoglycan cell wall which lies between a cytoplasmic cell membrane and an outer membrane, as seen in Figure 4. The outer membrane contains lipopolysaccharides which consist of: lipid A, core polysaccharide, and O antigen in its outer leaflet and phospholipids in the inner leaflet (Salton, 1996.)Between the outer and cytoplasmic membrane, in what is known as the periplasmic space. Within the periplasmic space is a gel-like matrix called periplasm see Figure 4. Since it is a gram negative bacteria the S-layer is directly attached to the outer membrane rather than to the peptidoglycan (Salton 1996).Proteins known as porins also exist on the outer membrane which act as channels and allow small ions and molecules through the membrane (NCBI). P. stuartii are motile by peritrichous flagella.


METABOLISM & KEY PRODUCTS
METABOLISM & KEY PRODUCTS
Line 49: Line 54:
   
   
P. stuartii is a urease-positive species] [[#References|[1]]]. This is significant because ureases are enzymes that catalyze the hydrolysis of urea into carbon dioxide and ammonia. This can have health implications for humans and animals, when P. stuartii live in the urinary tract. Urease activity is a known contributing factor to the development of urolithiasis, also known as kidney stones.
P. stuartii is a urease-positive species] [[#References|[1]]]. This is significant because ureases are enzymes that catalyze the hydrolysis of urea into carbon dioxide and ammonia. This can have health implications for humans and animals, when P. stuartii live in the urinary tract. Urease activity is a known contributing factor to the development of urolithiasis, also known as kidney stones.
LIFE CYCLE
[[Image:Free floating p stuartii.PNG|thumb|450px|left|Figure 4: Example of leftover floating communities once planktonic cells had been washed away, giving evidence to the bacteria's highly social cell-to-cell interaction prior to biofilm formation [[#References|[1]]]]]]
P. stuartii’s resistance to antibiotics also stems from its biofilm formation. It has a ‘highly social behaviour’, where cell to cell contact occurs prior to attachment of cells onto the surface. These floating communities precede biofilm formation and then coexist with it once a biofilm is created. These biofilms are majority living cells. It can form this biofilm over a large range of pH, from 6-9 and can consolidate at pH 5, showing great resistance to extreme environmental conditions. Biofilm genesis and attachment is favored at pH >8 and can attach directly to a urinary catheter. Biofilms can also resist high concentration of urea (500mM), calcium and magnesium (up to 50mM) and when presented with these stressors will consolidate. P. stuartii biofilm dispersion is also high and infections that were originally in the urinary tract can migrate to other organs and cause a variety of issues including meningitis and endocarditis [[#References|[1]]].
It has also been proposed that the biofilm formation limits the diffusion of urea into the extracellular matrix of P. stuartii biofilms. Porins, an outer membrane protein of the biofilm, also likely play an effect in reducing urea accumulation in the periplasm (the gel-like matrix in the space between the inner cytoplasmic membrane and the bacterial outer membrane in gram negative bacteria) [[#References|[1]]].




==Ecology and Pathogenesis==
==Ecology and Pathogenesis==
Habitat; symbiosis; biogeochemical significance; contributions to environment.<br>
 
If relevant, how does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.<br><br>
P. stuartii is an opportunistic pathogen, with those infected mainly the elderly under long-term catheterization. It is reported that it is found in 4 of 100,000 hospital admissions of the general population, but is responsible for 9% of UTIs in patients under long-term catheterization, with an inhospital mortality rate of ~30% [[#References|[2]]]. It often co-infects with P. mirabilis, which is also urease positive, to sustain itself in the harsh urea environment of the urinary tract.  
 
Though P. stuartii often does not cause serious disease, it has high intrinsic multidrug resistance (MDR) phenotype due to the inducible encoding of AmpC β-lactamase, an enzyme that can destroy the antimicrobial activity of antibiotics such as penicillin and cephalothin [[#References|[5]]]. Though commonly causing UTIs, these can progress to bacteremia if not treated, which can be difficult due to the multidrug resistance mentioned above. To prevent the spread of Providencia drug resistance, infection control practices, such as hand-hygiene and disinfection of hospital equipment, are needed as a single antimicrobial agent to combat them is difficult to create and adaption comes quickly[[#References|[2]]].
<br><br>


==References==
==References==

Latest revision as of 16:27, 20 April 2018

This student page has not been curated.

Classification

Domain: Bacteria

Phylum: Proteobacteria

Class: Gammaproteobacteria

Order: Enterobacteriales

Family: Enterobacteriaceae

Genus: Providencia

Species

NCBI: Taxonomy

Providencia stuartii

Description and Significance

Providencia stuartii is a gram-negative bacteria.

Figure 2: Visual comparison of gram-negative bacteria and gram-positive bacteria using the gram-staining technique NIAID

In laboratory settings,it is best cultured in Nutrient Agar or Columbia agar, with growth best at 37C and a mesophilic temperature range. It is of risk group 2 on the biosafety level[5].

P. stuartii has a straight rod morphology and is typically 0.6-0.8 micrometers by 1.5-2.5 micrometers in size [6].

P. stuartii is ubiquitous, being commonly found in water, soil, and animal reservoirs [2].

It is responsible for many UTIs in patients under long term catheterization and has a high degree of antibiotic resistance, a major concern for hospitals and nursing homes where many patients are vulnerable to infection from this microbe. Treatment, once infected, is difficult.

Genome Structure

In 2011 P. stuartii MRSN 2154 was sequenced using the Roche GS FLX Titanium system with a shotgun rapid ligation library. The sequencing found that P. stuartii MRSN 2154 has a “circular genome of 4,402,109 nucleotides and a G/C (guanine-cytosine) content of 41.27%" (NCBI).

The P. stuarttii MRSN 2154 genome has 4,194 predicted genes, 75 tRNA genes, and seven transoperons (NBCI)

It has two porins, Omp-Pst1 and Omp-Pst2. It primary expressed Omp-pst1 in a rich medium, which is mildly anion selective and more permissive of beta lactam antibiotics. In comparison, Omp-Pst2 has atypical voltage gating behavior and could play a role is charge distribution across the outer membrane. When Omp-Pst2 was knocked down, P. stuartii growth was retarded, indicating that this porin plays an important role in development[1].

Cell Structure, Metabolism and Life Cycle

CELL STRUCTURE

Providencia stuartii has many of the characteristics common to gram-negative bacteria. Providencia stuartii has a cell envelope. This cell envelope is comprised of a thin peptidoglycan cell wall which lies between a cytoplasmic cell membrane and an outer membrane, as seen in Figure 4. The outer membrane contains lipopolysaccharides which consist of: lipid A, core polysaccharide, and O antigen in its outer leaflet and phospholipids in the inner leaflet (Salton, 1996.)Between the outer and cytoplasmic membrane, in what is known as the periplasmic space. Within the periplasmic space is a gel-like matrix called periplasm see Figure 4. Since it is a gram negative bacteria the S-layer is directly attached to the outer membrane rather than to the peptidoglycan (Salton 1996).Proteins known as porins also exist on the outer membrane which act as channels and allow small ions and molecules through the membrane (NCBI). P. stuartii are motile by peritrichous flagella.

METABOLISM & KEY PRODUCTS

P. stuartii is facultatively anaerobic and is a chemoorganotrophic. P. stuartii has both a fermentative and respiratory metabolism [6].

Figure 2: Urease acts as a catalyst for the transformation of urea into ammonia. From: European publication server

P. stuartii is a urease-positive species] [1]. This is significant because ureases are enzymes that catalyze the hydrolysis of urea into carbon dioxide and ammonia. This can have health implications for humans and animals, when P. stuartii live in the urinary tract. Urease activity is a known contributing factor to the development of urolithiasis, also known as kidney stones.

LIFE CYCLE

Figure 4: Example of leftover floating communities once planktonic cells had been washed away, giving evidence to the bacteria's highly social cell-to-cell interaction prior to biofilm formation [1

]]

P. stuartii’s resistance to antibiotics also stems from its biofilm formation. It has a ‘highly social behaviour’, where cell to cell contact occurs prior to attachment of cells onto the surface. These floating communities precede biofilm formation and then coexist with it once a biofilm is created. These biofilms are majority living cells. It can form this biofilm over a large range of pH, from 6-9 and can consolidate at pH 5, showing great resistance to extreme environmental conditions. Biofilm genesis and attachment is favored at pH >8 and can attach directly to a urinary catheter. Biofilms can also resist high concentration of urea (500mM), calcium and magnesium (up to 50mM) and when presented with these stressors will consolidate. P. stuartii biofilm dispersion is also high and infections that were originally in the urinary tract can migrate to other organs and cause a variety of issues including meningitis and endocarditis [1].

It has also been proposed that the biofilm formation limits the diffusion of urea into the extracellular matrix of P. stuartii biofilms. Porins, an outer membrane protein of the biofilm, also likely play an effect in reducing urea accumulation in the periplasm (the gel-like matrix in the space between the inner cytoplasmic membrane and the bacterial outer membrane in gram negative bacteria) [1].


Ecology and Pathogenesis

P. stuartii is an opportunistic pathogen, with those infected mainly the elderly under long-term catheterization. It is reported that it is found in 4 of 100,000 hospital admissions of the general population, but is responsible for 9% of UTIs in patients under long-term catheterization, with an inhospital mortality rate of ~30% [2]. It often co-infects with P. mirabilis, which is also urease positive, to sustain itself in the harsh urea environment of the urinary tract.

Though P. stuartii often does not cause serious disease, it has high intrinsic multidrug resistance (MDR) phenotype due to the inducible encoding of AmpC β-lactamase, an enzyme that can destroy the antimicrobial activity of antibiotics such as penicillin and cephalothin [5]. Though commonly causing UTIs, these can progress to bacteremia if not treated, which can be difficult due to the multidrug resistance mentioned above. To prevent the spread of Providencia drug resistance, infection control practices, such as hand-hygiene and disinfection of hospital equipment, are needed as a single antimicrobial agent to combat them is difficult to create and adaption comes quickly[2].

References

[1] El Khatib M, Tran Q-T, Nasrallah C, Lopes J, Bolla J-M, Vivaudou M, et al. (2017) Providencia stuartii form biofilms and floating communities of cells that display high resistance to environmental insults. PLoS ONE 12(3): e0174213.

[2] Wie, Seong-Heon. (2015) Clinical significance of Providencia bacteria or bacteriuria. Korean J Intern Med. 20(3): 167-169.

[3] Cunningham, Lennox, and Ross (2010). A brief introduction to Biofilms. Website.

[4] Jacoby, G. A. (2009). AmpC β-Lactamases. Clinical Microbiology Reviews, 22(1), 161–182

[5] Carola Söhngen, Adam Podstawka, Boyke Bunk, Dorothea Gleim, Anna Vetcininova, Lorenz Christian Reimer, Christian Ebeling, Cezar Pendarovski, Jörg Overmann; BacDive – The Bacterial Diversity Metadatabase in 2016, Nucleic Acids Research, Volume 44, Issue D1, 4 January 2016, Pages D581–D585.

[6] Providencia. Hardy Diagnostics.


Author

Page authored by Bry Caswell and Lily Bunis, students of Prof. Jay Lennon at IndianaUniversity.