Psychrobacter: Difference between revisions

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'''NCBI:<br />[http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=38568 Taxonomy]<br />{{Biorealm}}
[http://www.ncbi.nlm.nih.gov/genomes/framik.cgi?db=genome&gi=18525 Genome] '''
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[[Image:Psychrobacter_immobilis_Culture.jpg|thumb|400px|right|''Psychrobacter immobilis''. Image from [http://medecinepharmacie.univ-fcomte.fr/bacterio_web/exa_microscopiques/bgn/Psychrobacter_immobilis_Culture.htm Bacterio-Web.]]]
[[Image:Psychrobacter_immobilis_Culture.jpg|thumb|400px|right|''Psychrobacter immobilis''. Image from [http://medecinepharmacie.univ-fcomte.fr/bacterio_web/exa_microscopiques/bgn/Psychrobacter_immobilis_Culture.htm Bacterio-Web.]]]


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''Psychrobacter adeliensis, P. alimentarius, P. aquaticus, P. aquimaris, P. arcticus, P. arenosus, P. celer, P. cibarius, P. cryohalolentis, P. faecalis, P. fozii, P. frigidicola, P. glacialis, P. glacincola, P. aff. glacinola 4.21, P. aff. glacinola A1/C-aer/OII, P. halophilus, P. immobilis, P. jeotgali, P. luti, P. marincola, P. maritimus, P. meningitidis, P. namhaensis, P. nivimaris, P. okhotskensis, P. pacificensis, P. phenylpyruvicus, P. proteolyticus, P. psychrophilus, P. pulmonis, P. salsus, P. submarinus, P. urativorans, P. vallis, P. sp.''
''Psychrobacter adeliensis, P. alimentarius, P. aquaticus, P. aquimaris, P. arcticus, P. arenosus, P. celer, P. cibarius, P. cryohalolentis, P. faecalis, P. fozii, P. frigidicola, P. glacialis, P. glacincola, P. aff. glacinola 4.21, P. aff. glacinola A1/C-aer/OII, P. halophilus, P. immobilis, P. jeotgali, P. luti, P. marincola, P. maritimus, P. meningitidis, P. namhaensis, P. nivimaris, P. okhotskensis, P. pacificensis, P. phenylpyruvicus, P. proteolyticus, P. psychrophilus, P. pulmonis, P. salsus, P. submarinus, P. urativorans, P. vallis, P. sp.''
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'''NCBI: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=38568 Taxonomy] [http://www.ncbi.nlm.nih.gov/genomes/framik.cgi?db=genome&gi=18525 Genome]'''
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==Description and Significance==
==Description and Significance==

Latest revision as of 20:40, 6 August 2010

This is a curated page. Report corrections to Microbewiki.

A Microbial Biorealm page on the genus Psychrobacter

Psychrobacter immobilis. Image from Bacterio-Web.

Classification

Higher order taxa

Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae

Species:

Psychrobacter adeliensis, P. alimentarius, P. aquaticus, P. aquimaris, P. arcticus, P. arenosus, P. celer, P. cibarius, P. cryohalolentis, P. faecalis, P. fozii, P. frigidicola, P. glacialis, P. glacincola, P. aff. glacinola 4.21, P. aff. glacinola A1/C-aer/OII, P. halophilus, P. immobilis, P. jeotgali, P. luti, P. marincola, P. maritimus, P. meningitidis, P. namhaensis, P. nivimaris, P. okhotskensis, P. pacificensis, P. phenylpyruvicus, P. proteolyticus, P. psychrophilus, P. pulmonis, P. salsus, P. submarinus, P. urativorans, P. vallis, P. sp.

NCBI: Taxonomy Genome

Description and Significance

Psychrobacter is a genus within the gamma-proteobacteria. These bacteria live in extremely cold habitats, such as Antarctic ice, soil, and sediments, as well as in deep sea environments. One species, Psychrobacter cryohalolentis, has been isolated from samples of Siberian permafrost, where temperatures are typically 9º-11º C. Researchers have been able to use these strains to learn more about the evolution and response of bacteria when exposed to extremely low temperatures. Psychrobacter have also been found in various food sources, including poultry, fish, and meat products. While little is known about species of Psychrobacter in humans, Psychrobacter immobilus has been isolated from sources such as the eye, brain tissue, urethra, cerebral spinal fluid, and blood, leading some scientists to suspect that these bacteria may be the cause of opportunistic infections in some patients. The clinical manifestation of this species is virtually unknown, although it has been isolated in patients with menigitis and other infections.

Genome Structure

The genome of Psychrobacter arcticum has been completely sequenced, containing 2,147 genes and approximately 2.64 Mb in size. Studying this organism's genome sequence will enable scientists to pinpoint certain genes and molecules which enable Psychrobacter articum and similar bacteria to survive in the permafrost environment. Comparisons with the sequences of non-permafrost-inhabiting Psychrobacter species allow researchers to distinguish those genes which aid in cryo-adaption. Using genes from the genomic sequencing project, researchers at Michigan State University are also developing methods of testing the results of stress on Psychrobacter induced by temperature and water activity changes.

Cell Structure and Metabolism

Diploform, coccoid cells of Psychrobacter. Image from Bozal et al., IJSEM 2003.

Psychrobacter cells are nonmotile, Gram-negative coccobacilli which are often found as diploforms, measuring 0.4-1.8 by 0.4-0.8 microns in size. The organisms are oxidase-positive, with a strictly oxidative metabolism and demonstrate a moderate halotolerance. A better understanding of Psychrobacter's metabolic system may aid in research on potential extraterrestrial cryo-dwelling organisms.

Ecology

Species of Psychrobacter are found in the freezing waters and icebergs of Antarctica. Image from BBC News.

Psychrobacter 's habitats range from glacier mud in Antarctica to human tissues, making them interesting organisms for the medical profession as well as microbiological and environmental research. Their ability to live in extremely cold climates make them prime subjects for research regarding the genetic tendencies of extraterrestrial bacteria, which may live in similar environments. Further studies on Psychrobacter's metabolic pathways may provide better insight into the evolution of microbes as well.

References

Bozal, Nuria et al. Characterization of several Psychrobacter strains isolated from Antarctic environments and description of Psychrobacter luti sp. nov. International Journal of Systematic and Evolutionary Microbiology vol 53 2003. 1093-1100.

Llyod-Puryear, Michele et al. Meningitis Caused by Psychrobacter immobilus in an Infant. Journal of Clinical Microbiology vol 29(9) September 1991. 2041-2042.

Psychrobacter cryohalotensis K5. Doe Joint Genome Institute, U.S. Department of Energy.

Thomashow, Michael F. et al. Michigan State University's Center for Genomics and Evolutionary Studies on Microbial Life at Low Temperatures. NASA Astrobiology Institute. July 2003-June 2004.