Difference between revisions of "Template:Microbial Phenomics Data"

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m (Protected "Template:Microbial Phenomics Data" (‎[edit=sysop] (indefinite) ‎[move=sysop] (indefinite)))
 
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__NOTOC__
 
<noinclude>
 
<noinclude>
 
This is the "Microbial Phenomics Data" template.
 
This is the "Microbial Phenomics Data" template.
It should be called in the following format:
 
<pre>
 
{{Microbial Phenomics Data
 
|IMG Genome ID=
 
|Family=
 
|Genus=
 
|Species=
 
|Strain=
 
|Cell shape=
 
|Pigments=
 
|cell wall=
 
|motility=
 
|biofilm formation=
 
|habitat=
 
|oxygen use=
 
|salinity preference=
 
|host=
 
|symbiotic=
 
|pathogenic=
 
|Mono & di-saccharides=
 
|Polysaccharides=
 
|Amino acids=
 
|Alcohols=
 
|Fatty acids=
 
|MetabolizesOther=
 
|fermentation products=
 
|antioxidants=
 
|amino acids=
 
|polyalkanoates (plastics)=
 
|other metabolic products=
 
|pH minimum=
 
|pH optimum=
 
|pH maximum=
 
|Temperature minimum=
 
|Temperature optimum=
 
|Temperature maximum=
 
|NaCl minimum=
 
|NaCl optimum=
 
|NaCl maximum=
 
|Antibiotic sensitivity=
 
|Antibiotic resistant=
 
}}
 
</pre>
 
 
Edit the page to see the template text.
 
Edit the page to see the template text.
 
</noinclude><includeonly>{| class="wikitable"
 
</noinclude><includeonly>{| class="wikitable"
Line 49: Line 7:
 
!
 
!
 
! Source text
 
! Source text
! IMG Genome ID
+
|-
 +
! 16S rRNA accession #
 
|  [[IMG Genome ID::{{{IMG Genome ID|}}}]]  
 
|  [[IMG Genome ID::{{{IMG Genome ID|}}}]]  
 
|  [[{{{IMG Genome ID source text|}}}]]
 
|  [[{{{IMG Genome ID source text|}}}]]
Line 55: Line 14:
 
! Family
 
! Family
 
|  [[Family::{{{Family|}}}]]  
 
|  [[Family::{{{Family|}}}]]  
 +
|  [[{{{Family source text|}}}]]
 
|-
 
|-
 
! Genus
 
! Genus
 
|  [[Genus::{{{Genus|}}}]]  
 
|  [[Genus::{{{Genus|}}}]]  
 +
|  [[{{{Genus source text|}}}]]
 
|-
 
|-
 
! Species
 
! Species
 
|  [[Species::{{{Species|}}}]]  
 
|  [[Species::{{{Species|}}}]]  
 +
|  [[{{{Species source text|}}}]]
 
|-
 
|-
 
! Strain
 
! Strain
 
|  [[Strain::{{{Strain|}}}]]  
 
|  [[Strain::{{{Strain|}}}]]  
 +
|  [[{{{Strain source text|}}}]]
 +
|-
 +
! <h3 style="text-align: left">Genetic characteristics</h3>
 +
|-
 +
! Genome size:
 +
| [[Genome size::{{{Genome size}}}]]
 +
| [[{{{Genome size source text}}}]]
 +
|-
 +
! %G+C:
 +
| [[Percent size::{{{Percent G plus C|size=25}}}]]
 +
| [[{{{Percent G plus C source text}}}]]
 +
|-
 +
! Other genetic characteristics:
 +
| [[Other genetic characteristics::{{{Other genetic characteristics}}}]]
 +
| [[{{{Other genetic characteristics source text}}}]]
 +
|-
 +
! <h3 style="text-align: left">Morphological features</h3>
 
|-
 
|-
 
! Cell shape
 
! Cell shape
 
|  [[Cell shape::{{{Cell shape|}}}]]
 
|  [[Cell shape::{{{Cell shape|}}}]]
 +
|  [[{{{Cell shape source text|}}}]]
 
|-
 
|-
 
! Pigments
 
! Pigments
 
|  [[Pigments::{{{Pigments|}}}]]
 
|  [[Pigments::{{{Pigments|}}}]]
 +
|  [[{{{Pigments source text|}}}]]
 
|-
 
|-
 
! Cell wall
 
! Cell wall
 
|  [[Cell Wall::{{{cell wall|}}}]]
 
|  [[Cell Wall::{{{cell wall|}}}]]
 +
|  [[{{{Cell wall source text|}}}]]
 
|-
 
|-
 
! Motility
 
! Motility
 
|  [[motility::{{{motility|}}}]]
 
|  [[motility::{{{motility|}}}]]
 +
|  [[{{{Motility source text|}}}]]
 
|-
 
|-
 
! Biofilm formation
 
! Biofilm formation
 
|  [[biofilm formation::{{{biofilm formation|}}}]]
 
|  [[biofilm formation::{{{biofilm formation|}}}]]
 +
|  [[{{{Biofilm formation source text|}}}]]
 +
|-
 +
! <h3 style="text-align: left">Environmental parameters</h3>
 
|-
 
|-
 
! Habitat isolated from
 
! Habitat isolated from
 
|  [[habitat::{{{habitat|}}}]]
 
|  [[habitat::{{{habitat|}}}]]
 +
|  [[{{{Habitat source text|}}}]]
 
|-
 
|-
 
! Oxygen use
 
! Oxygen use
 
|  [[oxygen use::{{{oxygen use|}}}]]
 
|  [[oxygen use::{{{oxygen use|}}}]]
 +
|  [[{{{Oxygen use source text|}}}]]
 
|-
 
|-
! Salinity preference=
+
! Salinity preference
 
|  [[salinity preference::{{{salinity preference|}}}]]
 
|  [[salinity preference::{{{salinity preference|}}}]]
 +
|  [[{{{Salinity source text|}}}]]
 +
|-
 +
! pH minimum
 +
|  [[pH minimum::{{{pH minimum|}}}]]
 +
|-
 +
! pH optimum
 +
|  [[pH optimum::{{{pH optimum|}}}]]
 +
|-
 +
! pH maximum
 +
|  [[pH maximum::{{{pH maximum|}}}]]
 +
|  [[{{{pH source text|}}}]]
 +
|-
 +
! Temperature minimum
 +
|  [[Temperature minimum::{{{Temperature minimum|}}}]]
 +
|-
 +
! Temperature optimum
 +
|  [[Temperature optimum::{{{Temperature optimum|}}}]]
 +
|-
 +
! Temperature maximum
 +
|  [[Temperature maximum::{{{Temperature maximum|}}}]]
 +
|  [[{{{Temperature source text|}}}]]
 +
|-
 +
! NaCl minimum
 +
|  [[NaCl minimum::{{{NaCl minimum|}}}]]
 +
|-
 +
! NaCl optimum
 +
|  [[NaCl optimum::{{{NaCl optimum|}}}]]
 +
|-
 +
! NaCl maximum
 +
|  [[NaCl maximum::{{{NaCl maximum|}}}]]
 +
|  [[{{{NaCl source text|}}}]]
 +
|-
 +
! <h3 style="text-align: left">Host microbe interactions</h3>
 
|-
 
|-
 
! Host
 
! Host
 
|  [[host::{{{host|}}}]]
 
|  [[host::{{{host|}}}]]
 +
|  [[{{{Host source text|}}}]]
 
|-
 
|-
 
! Symbiotic
 
! Symbiotic
 
|  [[symbiotic::{{{symbiotic|}}}]]
 
|  [[symbiotic::{{{symbiotic|}}}]]
 +
|  [[{{{Symbiotic source text|}}}]]
 
|-
 
|-
 
! Pathogenic
 
! Pathogenic
|  [[pathogenic::{{{pathogenics|}}}]]
+
|  [[pathogenic::{{{pathogenic|}}}]]
 +
|  [[{{{Pathogenic source text|}}}]]
 +
|-
 +
! Disease caused
 +
|  [[Causes disease::{{{Causes disease|}}}]]
 +
|-
 +
! Metabolism (energy & carbon source)
 
|-
 
|-
 
! Mono & di-saccharides
 
! Mono & di-saccharides
| [[mono & di-saccharides::{{{mono & di-saccharides|}}}]]
+
| [[mono &amp; di-saccharides::{{{mono &amp; di-saccharides|}}}]]
 +
|  [[{{{mono &amp; di-saccharides source text|}}}]]
 
|-
 
|-
 
! Polysaccharides
 
! Polysaccharides
 
| [[Polysaccharides::{{{polysaccharides|}}}]]
 
| [[Polysaccharides::{{{polysaccharides|}}}]]
 +
|  [[{{{Polysaccharides source text|}}}]]
 
|-
 
|-
 
! Amino acids
 
! Amino acids
 
| [[Amino acids::{{{amino acids|}}}]]
 
| [[Amino acids::{{{amino acids|}}}]]
 +
|  [[{{{Amino acids source text|}}}]]
 
|-
 
|-
 
! Alcohols
 
! Alcohols
 
| [[Alcohols::{{{alcohols|}}}]]
 
| [[Alcohols::{{{alcohols|}}}]]
 +
|  [[{{{Alcohols source text|}}}]]
 
|-
 
|-
 
! Fatty acids
 
! Fatty acids
| [[Fatty acids::{{{atty acids|}}}]]
+
| [[Fatty acids::{{{Fatty acids|}}}]]
 +
|  [[{{{Fatty acids source text|}}}]]
 
|-
 
|-
! Other
+
! Other energy or carbon sources
 
| [[MetabolizesOther::{{{MetabolizesOther|}}}]]
 
| [[MetabolizesOther::{{{MetabolizesOther|}}}]]
 +
|  [[{{{MetabolizesOther source text|}}}]]
 +
|-
 +
! <h3 style="text-align: left">Metabolite products</h3>
 
|-
 
|-
 
! Fermentation products
 
! Fermentation products
 
| [[Fermentation products::{{{Fermentation products|}}}]]
 
| [[Fermentation products::{{{Fermentation products|}}}]]
 +
|  [[{{{Fermentation products source text|}}}]]
 
|-
 
|-
! Antioxidants
+
! Polyalkanoates (plastics)
| [[antioxidants::{{{antioxidants|}}}]]
+
| [[Polyalkanoates::{{{Polyalkanoates|}}}]]
|-
+
| [[{{{Polyalkanoates source text|}}}]]
! amino acids
 
| [[amino acids::{{{amino acids|}}}]]
 
|-
 
! polyalkanoates (plastics)
 
| [[polyalkanoates (plastics)::{{{polyalkanoates (plastics|}}}]]
 
 
|-
 
|-
 
! Other metabolic product
 
! Other metabolic product
 
| [[Other metabolic product::{{{Other metabolic product|}}}]]
 
| [[Other metabolic product::{{{Other metabolic product|}}}]]
 +
|  [[{{{Other metabolic product source text|}}}]]
 
|-
 
|-
! pH minimum
+
! <h3 style="text-align: left">Antibiotic characteristics</h3>
|  [[pH minimum::{{{pH minimum|}}}]]
 
|-
 
! pH optimum
 
|  [[pH optimum::{{{pH optimum|}}}]]
 
|-
 
! pH maximum
 
|  [[pH maximum::{{{pH maximum|}}}]]
 
|-
 
! Temperature minimum
 
|  [[Temperature minimum::{{{Temperature minimum|}}}]]
 
|-
 
! Temperature optimum
 
|  [[Temperature optimum::{{{Temperature optimum|}}}]]
 
|-
 
! Temperature maximum
 
|  [[Temperature maximum::{{{Temperature maximum|}}}]]
 
|-
 
! NaCl minimum
 
|  [[NaCl minimum::{{{NaCl minimum|}}}]]
 
|-
 
! NaCl optimum
 
|  [[NaCl optimum::{{{NaCl optimum|}}}]]
 
|-
 
! NaCl maximum
 
|  [[NaCl maximum::{{{NaCl maximum|}}}]]
 
 
|-
 
|-
 
! Antibiotic sensitivity
 
! Antibiotic sensitivity
 
|  [[Antibiotic sensitivity::{{{Antibiotic sensitivity|}}}]]
 
|  [[Antibiotic sensitivity::{{{Antibiotic sensitivity|}}}]]
 +
|  [[{{{Antibiotic sensitivity source text|}}}]]
 
|-
 
|-
 
! Antibiotic resistant
 
! Antibiotic resistant
 
|  [[Antibiotic resistant::{{{Antibiotic resistant|}}}]]
 
|  [[Antibiotic resistant::{{{Antibiotic resistant|}}}]]
 +
|  [[{{{Antibiotic resistant source text|}}}]]
 
|}
 
|}
 
+
Peer review ready: [[Peer review ready::{{{Peer review ready}}}]]
 +
Peer review complete: [[Peer review complete::{{{Peer review complete}}}]]
 
[[Category:Microbial Phenomics Data]]
 
[[Category:Microbial Phenomics Data]]
 
</includeonly>
 
</includeonly>

Latest revision as of 19:26, 26 March 2014


This is the "Microbial Phenomics Data" template. Edit the page to see the template text.