Chlamydophila abortus: Difference between revisions
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==Genome structure== | ==Genome structure== | ||
This bacteria contains 1,144,377 base pairs within its genome, with a guanine-cytosine pairing taking up 39.9% of the base pairs. ''C. abortus'' contains 961 genes which are all arranged in a circular manner; of the 961 genes there is a 40.5% guanine-cytosine composition. 842 of the genes are conserved with Chlamydophila caviae and chlamydophila pneumoniae. Through experimental evidence it was shown that 746 of the coding sequences have identified functional assignments, while 215 have no found function. 110 of the 215 non-functional sequences were found to be similar in other proteins of ''Chlamydiaceae.'' Of the whole genome there is a coding density of 88.2%. There are 18 Pmp proteins, 38 tRNAs, and 1 rRNA.(6) The genome contains single copies of 23S, 16S, and 5S rRNA genes which is different from Chlamydia. Through its genome sequence it is apparent that the pathogen has many varible proteins along it membrane that account for its varible contents. (6,2) | This bacteria contains 1,144,377 base pairs within its genome, with a guanine-cytosine pairing taking up 39.9% of the base pairs. ''C. abortus'' contains 961 genes which are all arranged in a circular manner; of the 961 genes there is a 40.5% guanine-cytosine composition. 842 of the genes are conserved with Chlamydophila caviae and chlamydophila pneumoniae. Through experimental evidence it was shown that 746 of the coding sequences have identified functional assignments, while 215 have no found function. 110 of the 215 non-functional sequences were found to be similar in other proteins of ''Chlamydiaceae.'' Of the whole genome there is a coding density of 88.2%. There are 18 Pmp proteins, 38 tRNAs, and 1 rRNA.(6) The genome contains single copies of 23S, 16S, and 5S rRNA genes which is different from Chlamydia. There is no evidence of any phage genes in ''C. abortus,'' although genes for phage have been found in other ''Chlamydophila.'' Through its genome sequence it is apparent that the pathogen has many varible proteins along it membrane that account for its varible contents. (6,2) | ||
==Cell structure and metabolism== | ==Cell structure and metabolism== |
Revision as of 00:02, 30 May 2007
A Microbial Biorealm page on the genus Chlamydophila abortus
Classification
Higher order taxa
Kingdom: Bacteria
Phylum: Chlamydiae
Class: Chlamydiae(class)
Order: Chlamydiales
Family: Chlamydiaceae
Genus: Chlamydophila
Species: Chlamydiae
Species
Genus species:Chlamydophila abortus Description and significanceThis gram-negative bacteria is an obligate intracellular pathogen of eukaryotic cells. Chlamydophila abortus is found in cows, goats, sheep, and pigs where it causes abortion during the later period of pregnancy by colonizing in the placenta. This bacteria is enzootic where its infection is specific to animals; or it can be zoonotic where an animal disease spreads and infects a human. The enzootic abortion in sheep is called ovine enzootic abortion (OEA). This pathogen when zoonotic will cause abortion or serious health problems in women, by invading the placenta and causing infection and irritation. It is important to know the genome sequence due to its pathogenic affects on humans. The infection of C.abortus kills many livestock and causes economic burden to agricultural industries worldwide.(1 and 2)
Genome structureThis bacteria contains 1,144,377 base pairs within its genome, with a guanine-cytosine pairing taking up 39.9% of the base pairs. C. abortus contains 961 genes which are all arranged in a circular manner; of the 961 genes there is a 40.5% guanine-cytosine composition. 842 of the genes are conserved with Chlamydophila caviae and chlamydophila pneumoniae. Through experimental evidence it was shown that 746 of the coding sequences have identified functional assignments, while 215 have no found function. 110 of the 215 non-functional sequences were found to be similar in other proteins of Chlamydiaceae. Of the whole genome there is a coding density of 88.2%. There are 18 Pmp proteins, 38 tRNAs, and 1 rRNA.(6) The genome contains single copies of 23S, 16S, and 5S rRNA genes which is different from Chlamydia. There is no evidence of any phage genes in C. abortus, although genes for phage have been found in other Chlamydophila. Through its genome sequence it is apparent that the pathogen has many varible proteins along it membrane that account for its varible contents. (6,2) Cell structure and metabolismThis bacteria has two membranes and no flagella. It contains four specific proteins on its outer membrane, coded by the genes POMP 90A/B, and 91A/B. These genes are believed to be glycosylated which may be the reason for their heterogeneity. This pathogen lacks any toxin genes and lacks genes involved in tryptophan metabolism and nucleotide salvaging. Since C. abortus is a pathogen, this organism depends on its host for its proper nutrients and energy.(2) EcologyC. abortus lives and infects the placenta of pregnant livestock such as sheep, cows, and pigs. It has also been found in humans. Bacteria has been found in milk of cattle and also in bulls. If released to the environment through vaginal emission the bacteria is easily spread, and infects other organisms. PathologyThe class Chlamydiaceae have a very interesting developmental characteristic where they undergo a biphasic process of being infectious but metabolically inactive known as the elementary body, and then switching to a noninfectious but metabolically active cell called the reticulate body. Chlamydophila abortus cause infection by the elementary body binding to a host cell and becoming metabolically active, it then multiplies within the cells inclusion bodies. The inclusion bodies evade lysosomes and avoid the endocytic pathway and intercepts the exocytic pathway. They become secretory vacuoles to the host. The reticulate body are changed back to elementary bodies, then the inclusion bodies then are lysed off or exocytosis occurs, completing the infection.(6) The metabolically active form can be spread through ingestion, aerosols, or physical contact with the infected organism. The bacteria is easily contracted if one infected animal excretes uterine fluid in the environment and another animal comes into contact with it. In humans the symptoms are severe pain in the abdomen area, along with inflamation, influenza-like symptoms, and respiratory problems. If the women contracts the pathogen during the first trimester then spontaneous abortion is likely to occur. If the infection occurs later, than stillbirths or preterm labour is common.(4)
Application to BiotechnologyThis organism is not known to produce any useful compunds or enzymes. C. abortus is mostly known to infect its host and cause health problems. Due to its problematic and pathogenic nature there have been many studies to try to prevent or fight off this pathogen. There is an experimental vaccine against this pathogen that includes the inactivated C. abortus and C. pecorum elementary bodies. This vaccine was injected in cattle and seemed to prevent bovine mastitis and increase the antibody level against Chlamydophila. (3) Current ResearchC. abortus has become a major problem all around the world infecting livestock, and causing them to abort their babies. A study done in 2006, looked at the abortion rate of a group of sheep and goats in Hungary. The study took place over a seven and a half year period. They found that 63% of all the abortions were due to Chlamydophila abortus. As this study shows, C. abortus is very common and it has become more important to study to try to prevent the death of so many livestock.(5)
References1) Chlamydophila abortus. We Trust Sanger Institute. http://www.sanger.ac.uk/Projects/C_abortus/ 2) HAMAP: Chlamydophila abortus complete proteome. http://expasy.org/sprot/hamap/CHLAB.html 11) [1] Edited by Kylee Lim, student of Rachel Larsen and Kit Pogliano |