Arthrobacter globiformis: Difference between revisions
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The age of the media seems to be important in the morphology of ''Arthrobacter.'' In “young” media, the culture is rod-like whereas in older media the culture is coccoid. The optimal growth temperature for the ''Arthrobacter'' species is between 20 and 30 C. They also prefer a neutral to slightly alkaline pH for growth. ''A. globiformis'' grows to 4.95 Mb in size. [(3)] | The age of the media seems to be important in the morphology of ''Arthrobacter.'' In “young” media, the culture is rod-like whereas in older media the culture is coccoid. The optimal growth temperature for the ''Arthrobacter'' species is between 20 and 30 C. They also prefer a neutral to slightly alkaline pH for growth. ''A. globiformis'' grows to 4.95 Mb in size. [(3)] | ||
==Ecology | ==Ecology== | ||
''Arthrobacter'' was first found in the soil in the 19th century and since then has shown to be metabolically resourceful because of the variety of substrates it can grow on. ''A. globiformis'' has a significant positive role in its environment in many ways. It has the ability to oxidize ammonium into nitrite, nitrate and hydrylamine. This is important because it is a reliable source of nitrogen for the plants that need nitrogen to grow. ''A. globiformis'' can also reduce pesticides as well as other harmful chemicals that are found in the soil. A lot of plants are not capable of growing in the presence of hexavalent and trivalent chromium, but ''A. globiformis'' is able to grow in it and help reduce the amount of trivalent chromium. [(2)] Due to their metabolic diversity, ''Arthrobacter'' species have been used to biodegrade diverse types of pollutants in our environment. [(3)] | |||
==Current Research== | ==Current Research== | ||
Revision as of 03:55, 31 March 2017
Classification
Higher order taxa
Bacteria; Actinobacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae; Micrococcaceae [1]
Species
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NCBI: [2] |
Arthrobacter globiformis
Description and significance
Arthrobacters are bacteria that are typically found in soil, but are widely distributed in the environment. Arthrobacter globiformis is one of the species that is found in soil. Arthrobacter means “jointed small stick” in Greek. All Artrhobacter species are rods during growth and cocci in their stationary phase. Also, all Arthrobacter are gram-positive, but A. globifomris is gram-negative during exponential growth and gram-positive in its stationary phase. Conn and Dimmick (1947) introduced the genus name Arthrobacter, which was revived from an old name that was proposed by Fischer. Conn and Dimmick classified three species in the genus Arthrobacter and one of the species was A. globiformis. Now there are 64 species.
A. globiformis is nonmotile. Its colonies on yeast media have no distinctive pigmentation. [(1)] Colonies of A. globiformis that has been grown on nutrient agar is smooth, circular, convex eleveation with entire margin. [(atcc.org)] Most strains from the genus Arthrobacter do not seem to be pathogenic to humans and are nonsporulating. Arthrobacter is distinctive because of its unique cell division known as “snapping division.” Snapping division occurs because there are two cell wall layers and the inner layer forms a septum while the outer layer does not. When the septum formation is complete the outer layer keeps them from being attached. Eventually, the outer wall ruptures at a joint. [(3)]
(Ex. Arthrobacter)
Genome and genetics
a. To what major branch of the prokaryotes do they belong? (see textbook or Bergey’s). List 2-3 closely related but separate species or genera of bacteria.
b. Briefly describe any extra-chromosomal elements or genetic tools that are used to study the bacterium: viruses, plasmids, transposons that allow genetic manipulation and analysis.
c. Has the genome or genomes been sequenced? If so, include the website for the database and one or two highlights of the genome. Also indicate genome size (base pairs), %G+C (nucleotide base composition) and number of genes, and specific genes or gene regions that are unique to this organism. If it has not been sequenced, give its closest relative that has been sequenced, its website, and some general information about the related sequence.
Example: The sequence of Haemophilus influenzae was determined using whole genome shotgun sequencing (Fleischmann et al. 1995).
Nutrition and metabolism
A. globiformis uses ammonium salt or nitrate as a sole nitrogen source as well as glucose as a carbon and energy source. Arthrobacters are obligate aerobes, but remarkably, A. globiformis is one of the two species of Arthrobacter that showed the ability of anaerobic respiratory by using nitrate, glucose and pyruvate as carbon sources. It also grows anaerobically without the presence of nitrate while using glucose and pyruvic acid as its carbon sources. [(1)]
The age of the media seems to be important in the morphology of Arthrobacter. In “young” media, the culture is rod-like whereas in older media the culture is coccoid. The optimal growth temperature for the Arthrobacter species is between 20 and 30 C. They also prefer a neutral to slightly alkaline pH for growth. A. globiformis grows to 4.95 Mb in size. [(3)]
Ecology
Arthrobacter was first found in the soil in the 19th century and since then has shown to be metabolically resourceful because of the variety of substrates it can grow on. A. globiformis has a significant positive role in its environment in many ways. It has the ability to oxidize ammonium into nitrite, nitrate and hydrylamine. This is important because it is a reliable source of nitrogen for the plants that need nitrogen to grow. A. globiformis can also reduce pesticides as well as other harmful chemicals that are found in the soil. A lot of plants are not capable of growing in the presence of hexavalent and trivalent chromium, but A. globiformis is able to grow in it and help reduce the amount of trivalent chromium. [(2)] Due to their metabolic diversity, Arthrobacter species have been used to biodegrade diverse types of pollutants in our environment. [(3)]
Current Research
Describe recent research and findings that have been done with this organism. The research can be clinical, applied or basic research. This section should be based on 2 recent papers (10 years or less) and summarized in your own words.
References
2. Combined-Notes. Arthrobacteria globiformis/Combined-notes. [accessed 2017 Mar 29]. http://meaghanemma.pbworks.com/w/page/10520223/Combined-Notes.
3.Arthrobacter - Details. Encyclopedia of Life. [accessed 2017 Mar 30]. http://eol.org/pages/97262/details
4. Sharma M, Mishra V, Rau N, Sharma RS. Increased iron-stress resilience of maize through inoculation of siderophore-producing Arthrobacter globiformis from mine. Journal of basic microbiology. 2016 Jul [accessed 2017 Mar 30]. https://www.ncbi.nlm.nih.gov/pubmed/26632776
5. Engelke M, Köser J, Hackmann S, Zhang H, Mädler L, Filser J. A miniaturized solid contact test with Arthrobacter globiformis for the assessment of the environmental impact of silver nanoparticles. Environmental toxicology and chemistry. 2014 May [accessed 2017 Mar 30]. https://www.ncbi.nlm.nih.gov/pubmed/24477989
6. Niewerth H, Schuldes J, Parschat K, Kiefer P, Vorholt JA, Daniel R, Fetzner S. Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a. BMC Genomics. 2012 Oct 6 [accessed 2017 Mar 30]. http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-13-534
Authored by CYM, a student of CJ Funk at John Brown University
