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==Microbial Ecology Earth 373 MicrobeWiki Page Template==
==Overview==
==Overview==
[[Image:PHIL_1181_lores.jpg|thumb|300px|right|Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the [http://www.cdc.gov/ CDC].]]
[[Image:PHIL_1181_lores.jpg|thumb|300px|right|Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the [http://www.cdc.gov/ CDC].]]
<br>By [Jonathan Murray]<br>
 
<br>By [My Name-- PLEASE do this first!]<br>
 
<br>At right is a sample image insertion.  It works for any image uploaded anywhere to MicrobeWiki.<br><br>The insertion code consists of:
<br>At right is a sample image insertion.  It works for any image uploaded anywhere to MicrobeWiki.<br><br>The insertion code consists of:
<br><b>Double brackets:</b> [[
<br><b>Double brackets:</b> [[
<br><b>Filename:</b> PHIL_1181_lores.jpg
<br><b>Filename:</b> PHIL_1181_lores.jpg
<br><b>Thumbnail status:</b> |thumb|
<br><b>Thumbnail status:</b> |thumb|
<br><b>Pixel size:</b> |300px|
<br><b>Pixel size:</b> |300px|
<br><b>Placement on page:</b> |right|
<br><b>Placement on page:</b> |right|
<br><b>Legend/credit:</b> Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the [http://www.cdc.gov/ CDC]. Every image requires a link to the source.
<br><b>Legend/credit:</b> Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the [http://www.cdc.gov/ CDC]. Every image requires a link to the source.
<br><b>Closed double brackets:</b> ]]
<br><b>Closed double brackets:</b> ]]
<br><br>Other examples:
<br><br>Other examples:
<br><b>Bold</b>
<br><b>Bold</b>
<br><i>Italic</i>
 
<br><i>Italic</I>
 
<br><b>Subscript:</b> H<sub>2</sub>O
<br><b>Subscript:</b> H<sub>2</sub>O
<br><b>Superscript:</b> Fe<sup>3+</sup>
<br><b>Superscript:</b> Fe<sup>3+</sup>


<br> “Life”, esteemed Mathematician and chaos theorist Ian Malcom once said, “finds a way”. In no environment does this maxim hold quite as much wait as does the black smokers of the ocean sea-floors. “Black Smokers” are hydrothermal vents found at sights of tectonic ridges and seafloor spreading, and spew jets of intensely hot chemically-laden fluids [1]. Devoid of light, scarce of oxygen, and crushed under intense pressure from the ocean above, such an environment appears uninhabitable to our standards. Nevertheless, a diverse group of microbes and microbes have managed to make black smokers their home, taking advantage of the heat, inorganic compounds, and even the radiation of the superheated rock to sustain themselves[2]. The microbes found at black smokers are known as “extremophiles” for the ability to thrive in places otherwise lethal to other forms of life, thanks in part to physiological processes and enzymes able to function under harsh conditions such as intense heat, known collectively as “extremozymes”[3]. These microbes form both the principal primary production of the environment through chemoautotrophy, and some forms of photoautotrophy, and are essential to the survival of several of the macro-organisms discovered at the black smokers[2]. In fact, the ability of these microbes to sustain life under such conditions have led many microbiologists to theorize that the ecology of black smokers may reflect some of the earliest stages of life on earth[4]. <br>
<br>Introduce environment. Give key information relevant to the microbial ecology of the environment. <br>
Sample citations: <ref name=aa>[http://www.plosbiology.org/article/fetchObject.action?uri=info%3Adoi%2F10.1371%2Fjournal.pbio.1000005&representation=PDF Hodgkin, J. and Partridge, F.A. "<i>Caenorhabditis elegans</i> meets microsporidia: the nematode killers from Paris." 2008. PLoS Biology 6:2634-2637.]</ref>
 
<ref>[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3847443/ Bartlett et al.: Oncolytic viruses as therapeutic cancer vaccines. Molecular Cancer 2013 12:103.]</ref>
<ref>[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3847443/ Bartlett et al.: Oncolytic viruses as therapeutic cancer vaccines. Molecular Cancer 2013 12:103.]</ref>
<br><br>A citation code consists of a hyperlinked reference within "ref" begin and end codes.
<br><br>A citation code consists of a hyperlinked reference within "ref" begin and end codes.
<br>To repeat the citation for other statements, the reference needs to have a names: "<ref name=aa>"
 
<br>To repeat the citation for other statements, the reference needs to have a names: "<ref name=aa>”
 
<br> The repeated citation works like this, with a back slash.<ref name=aa/>
<br> The repeated citation works like this, with a back slash.<ref name=aa/>


==Detailed Environmental Description==
==Detailed Environmental Description==
Describe the physical and geochemical environment that you are reporting on. How well is has this been studied? Is it current or is most of the work from the 80s? What are the geochemical characteristics? Include some current research, with at least one figure showing data.<br>
Describe the physical and geochemical environment that you are reporting on. How well is has this been studied? Is it current or is most of the work from the 80s? What are the geochemical characteristics? Include some current research, with at least one figure showing data.<br>
<br>
 
Every point of information REQUIRES CITATION using the citation tool shown above.
<br> Every point of information REQUIRES CITATION using the citation tool shown above.


==Overview of Microbial Ecology as it is known==
==Overview of Microbial Ecology as it is known==
Discuss the alpha and beta diversity of the system. Include some current research, with at least one figure showing data.<br>
Discuss the alpha and beta diversity of the system. Include some current research, with at least one figure showing data.<br>
<br>


==Expansion topic 1-3==
==Expansion topic 1-3==
How you expand upon the basics will depend on your environment. Pick a couple or three of interesting subtopics and describe them in detail. Include some current research, with at least one figure showing data.<br>
How you expand upon the basics will depend on your environment. Pick a couple or three of interesting subtopics and describe them in detail. Include some current research, with at least one figure showing data.<br>
<br>
<br>


==Key Microbial Players==
==Key Microbial Players==
In all of your systems there will be at least a couple of key microbial players. Describe these in detail. Where do they fall on the tree of life? Are they cultured? What do they do in general and as it relates to your target environment?<br>
In all of your systems there will be at least a couple of key microbial players. Describe these in detail. Where do they fall on the tree of life? Are they cultured? What do they do in general and as it relates to your target environment?<br>
<br>
<br>


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==References==
==References==
<references />
<references />
<br><br>Authored for Earth 373 Microbial Ecology, taught by [mailto:maggie@northwestern.edu Magdalena Osburn], 2020, [https://www.earth.northwestern.edu/ NU Earth Page].
<br><br>Authored for Earth 373 Microbial Ecology, taught by [mailto:maggie@northwestern.edu Magdalena Osburn], 2020, [https://www.earth.northwestern.edu/ NU Earth Page].

Latest revision as of 22:43, 1 June 2020

Microbial Ecology Earth 373 MicrobeWiki Page Template

Overview

Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the CDC.


By [My Name-- PLEASE do this first!]


At right is a sample image insertion. It works for any image uploaded anywhere to MicrobeWiki.

The insertion code consists of:


Double brackets: [[


Filename: PHIL_1181_lores.jpg


Thumbnail status: |thumb|


Pixel size: |300px|


Placement on page: |right|


Legend/credit: Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the CDC. Every image requires a link to the source.


Closed double brackets: ]]



Other examples:


Bold


Italic


Subscript: H2O


Superscript: Fe3+


Introduce environment. Give key information relevant to the microbial ecology of the environment.

[1]



A citation code consists of a hyperlinked reference within "ref" begin and end codes.


To repeat the citation for other statements, the reference needs to have a names: "<ref name=aa>”


The repeated citation works like this, with a back slash.[2]

Detailed Environmental Description

Describe the physical and geochemical environment that you are reporting on. How well is has this been studied? Is it current or is most of the work from the 80s? What are the geochemical characteristics? Include some current research, with at least one figure showing data.


Every point of information REQUIRES CITATION using the citation tool shown above.

Overview of Microbial Ecology as it is known

Discuss the alpha and beta diversity of the system. Include some current research, with at least one figure showing data.

Expansion topic 1-3

How you expand upon the basics will depend on your environment. Pick a couple or three of interesting subtopics and describe them in detail. Include some current research, with at least one figure showing data.


Key Microbial Players

In all of your systems there will be at least a couple of key microbial players. Describe these in detail. Where do they fall on the tree of life? Are they cultured? What do they do in general and as it relates to your target environment?


Conclusion

References

  1. ↑ Bartlett et al.: Oncolytic viruses as therapeutic cancer vaccines. Molecular Cancer 2013 12:103.
  2. ↑ Cite error: Invalid <ref> tag; no text was provided for refs named aa



Authored for Earth 373 Microbial Ecology, taught by Magdalena Osburn, 2020, NU Earth Page.

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