User:M.chuvochina: Difference between revisions

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Maria Chuvochina
Bench ID
09082016
<ref>MICR3004</ref>
==Classification==
==Classification==


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==Description and significance==
==Description and significance==


Give a general description of the species (e.g. where/when was it first discovered, where is it commonly found, has it been cultured, functional role, type of bacterium [Gram+/-], morphology, etc.) and explain why it is important to study this microorganism. Examples reference <ref name ="Human Oral Microbiome">http://www.homd.org</ref>
Give a general description of the species (e.g. where/when was it first discovered, where is it commonly found, has it been cultured, functional role, type of bacterium [Gram+/-], morphology, etc.) and explain why it is important to study this microorganism. Examples of citations <sup>[[#References|[1]]]</sup>, <sup>[[#References|[2]]]</sup>


==Genome structure==
==Genome structure==


Select a strain for which genome information (e.g. size, plasmids, distinct genes, etc.) is available. <ref name ="10.1046/j.1462-2920.1999.00007.x">http://onlinelibrary.wiley.com/doi/10.1046/j.1462-2920.1999.00007.x/full</ref>
Select a strain for which genome information (e.g. size, plasmids, distinct genes, etc.) is available.  


==Cell structure and metabolism==
==Cell structure and metabolism==


Cell wall, biofilm formation, motility, metabolic functions.<sup>[[#References|[14]]]</sup>
Cell wall, biofilm formation, motility, metabolic functions.  


==Ecology==
==Ecology==
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==Pathology==
==Pathology==


Do these microorganisms cause disease in the oral cavity or elsewhere?
Do these microorganisms cause disease in the oral cavity or elsewhere?  


==Application to biotechnology==
==Application to biotechnology==
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==References==
==References==


14. [http://www.pnas.org/content/102/45/16339.short Bagnoli F, Buti L, Tompkins L, Covacci A, Amieva MR. Helicobacter pylori CagA induces a transition from polarized to invasive phenotypes in MDCK cells. <i>Proceedings of the National Academy of Science</i> USA 2005; 102(45):16339–16344.]
References examples
 
This is where the references labelled throughout the document will appear.


<references>
1. [http://onlinelibrary.wiley.com/doi/10.1046/j.1462-2920.1999.00007.x/full Sahm, K., MacGregor, B.J., Jørgensen, B.B., and Stahl, D.A. (1999) Sulphate reduction and vertical distribution of sulphate-reducing bacteria quantified by rRNA slotblot hybridization in a coastal marine sediment. Environ Microbiol <b>1</b>: 65-74.]
</references>


14. [http://www.pnas.org/content/102/45/16339.short Bagnoli F, Buti L, Tompkins L, Covacci A, Amieva MR. Helicobacter pylori CagA induces a transition from polarized to invasive phenotypes in MDCK cells. <i>Proceedings of the National Academy of Science</i> USA 2005; 102(45):16339–16344.]
2. [http://www.homd.org Human Oral Microbiome]


<references/>


This page is written by <your name> for the MICR3004 course, Semester 2, 2016
This page is written by <Maria Chuvochina> for the MICR3004 course, Semester 2, 2016

Latest revision as of 06:04, 9 August 2016

Maria Chuvochina Bench ID 09082016 [1]

Classification

Higher order taxa

Kingdom – Domain – Phylum – Class – Order – Family – Genus

Species

Species name and type strain (consult LPSN http://www.bacterio.net/index.html for this information)

Description and significance

Give a general description of the species (e.g. where/when was it first discovered, where is it commonly found, has it been cultured, functional role, type of bacterium [Gram+/-], morphology, etc.) and explain why it is important to study this microorganism. Examples of citations [1], [2]

Genome structure

Select a strain for which genome information (e.g. size, plasmids, distinct genes, etc.) is available.

Cell structure and metabolism

Cell wall, biofilm formation, motility, metabolic functions.

Ecology

Aerobe/anaerobe, habitat (location in the oral cavity, potential other environments) and microbe/host interactions.

Pathology

Do these microorganisms cause disease in the oral cavity or elsewhere?

Application to biotechnology

Bioengineering, biotechnologically relevant enzyme/compound production, drug targets,…

Current research

Summarise some of the most recent discoveries regarding this species.

References

References examples

1. Sahm, K., MacGregor, B.J., Jørgensen, B.B., and Stahl, D.A. (1999) Sulphate reduction and vertical distribution of sulphate-reducing bacteria quantified by rRNA slotblot hybridization in a coastal marine sediment. Environ Microbiol 1: 65-74.

2. Human Oral Microbiome

  1. MICR3004

This page is written by <Maria Chuvochina> for the MICR3004 course, Semester 2, 2016