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==Genome structure== | ==Genome structure== | ||
Strain: ATCC 17931 <sup>[[#References|[5]]]</sup> NCBI RefSeq: [http://www.ncbi.nlm.nih.gov/nuccore/NC_014643 NC_014643.1] | Strain: ATCC 17931 <sup>[[#References|[5]]]</sup> NCBI RefSeq: [http://www.ncbi.nlm.nih.gov/nuccore/NC_014643 NC_014643.1] |
Revision as of 05:29, 21 September 2016
Rothia dentocariosa
Alexandria Chin, Bench C, 17 November 2024
[1]
Classification
Higher order taxa
Bacteria – Terrabacteria group – Actinobacteria – Actinobacteria – Micrococcales – Micrococcaceae – Rothia [1]
Species
Rothia aeria (strain A1-17B), Rothia amarae (strain J18), Rothia dentocariosa (strain ATCC 17931), Rothia endophytica (strain YIM 67072), Rothia mucilaginosa (strain ATCC 25296), Rothia nasimurium (strain CCUG 35957), Rothia terrae (strain L-143) [2]
Description and significance
First discovered:
Commonly found: Mouth and respiratory tract
Type of bacterium: Gram-positive
Morphology: Coccoid to rod-shaped. Younger colonies are round, convex, smooth or creamy and potentially resembling corynebacteria and staphylococci. Mature colonies may be raised and highly convoluted. [4]
Cultured: Yes
Functional role:
Importance: Morphologically similar to Actinomyces and Nocardia genus, which contain pathogenic members. [3]
Genome structure
Strain: ATCC 17931 [5] NCBI RefSeq: NC_014643.1
SIze: 2,506,025 bp
Topology: Circular
Chromosome: 1
Plasmids: 0
Genes:
- Total - 2,126
- CDS - 2,040
- Protein - 2217
- RNA - 62
- rRNA - 10
- tRNA - 49
- ncRNA - 3
Cell structure and metabolism
Cell wall, biofilm formation, motility, metabolic functions.
Cell wall:
Biofilm formation:
Motility: non-motile, non-sporogenic
Metabolic functions:
Reactions: catalase production, nitrate and nitrite reduction, esculin hydrolysis and acid production from glucose, sucrose, maltose, salicin and glycerol. [3]
Ecology
Aerobe/anaerobe, habitat (location in the oral cavity, potential other environments) and microbe/host interactions.
Aerobic [4]
Habitat: Oral cavity, teeth, other potential environments??
Microbe-host interactions:
Pathology
Do these microorganisms cause disease in the oral cavity or elsewhere?
Application to biotechnology
Bioengineering, biotechnologically relevant enzyme/compound production, drug targets,…
Current research
Summarise some of the most recent discoveries regarding this species.
References
- ↑ MICR3004
2. List of Prokaryotic Names with Standing in Nomenclature
5. Pathosystems Resource Integration Center
This page is written by Alexandria Chin for the MICR3004 course, Semester 2, 2016
Lab identification and occurrence in human clinical materials