Bacillus Unknown: Difference between revisions
Line 3: | Line 3: | ||
Domain; Phylum; Class; Order; family [Others may be used. Use [http://www.ncbi.nlm.nih.gov/Taxonomy/ NCBI] link to find] | Domain; Phylum; Class; Order; family [Others may be used. Use [http://www.ncbi.nlm.nih.gov/Taxonomy/ NCBI] link to find] | ||
Domain: Bacteria Division/phylum: Firmicutes Class: Bacilli Order: Bacillales Family: Bacillaceae Genus: Bacillus Species: B. safensis | |||
===Species=== | ===Species=== | ||
Line 10: | Line 10: | ||
'''NCBI: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=2&lvl=3&lin=f&keep=1&srchmode=1&unlock Taxonomy]''' | '''NCBI: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=2&lvl=3&lin=f&keep=1&srchmode=1&unlock Taxonomy]''' | ||
|} | |} | ||
''Genus species'' | ''Genus species'' |
Revision as of 03:10, 8 December 2017
Classification
Domain; Phylum; Class; Order; family [Others may be used. Use NCBI link to find] Domain: Bacteria Division/phylum: Firmicutes Class: Bacilli Order: Bacillales Family: Bacillaceae Genus: Bacillus Species: B. safensis
Species
NCBI: Taxonomy |
Genus species
- Terrabacteria Group
Molecule Type
- Nucleic Acid
Habitat Information
- Types of Soil Organism was Found In:
*Heiden Clay, 5-8% slopes, eroded (most common) *Houston Black Clay, 1-3% slopes
Air Temp: 83 Degrees Fahrenheit/ 28 Degrees Celsius Humidity: 32 % 24 hr. Rainfall: 0.00in Pressure: 30.11 in/ 1018.5mb (sea level) Solar Radiation: 22.49 (mj/m^2) Wind at 4am: 2.06mph Wind at 4pm: 2.77mph
- Soil Location Description:
*Soil was taken from directly under a tree at Cabana Beach Apartments in San Marcos, Texas. This area is a very open area and gets water daily from sprinklers. The water it gets daily is minimal, so it does dry quickly. The soil was a very dark brown color. Had almost a dry dirt look and feel to it.
Description and Significance
- Description:
- Whiteish color, shiny, raised and semi flat
Most common similar Bacteria: Bacillus Safensis:
*Gram-positive, spore-forming, and rod bacterium Bacillus Safensis is a Gram-positive, spore-forming rod bacterium. Bacillus safensis is also an aerobic, chemoheterotroph. Cell size ranges from 0.5-0.7 μm in diameter and 1.0-1.2 μm in length. Bacteria are motile, and use polar flagella for locomotion. Cells are considered mesophillic, as they can grow in temperatures ranging between 10-50 °C
Genome Structure
Describe the size and content of the genome. How many chromosomes? Circular or linear? Other interesting features? What is known about its sequence? Include S Ribosomal sequence that you obtained from PCR and sequencing here.
DNA Sequencing Results:
""CCACCTGTCACTCTGTCCCCGAAGGGAAAGCCCTATCTCTAGGGTTGTCAGAGGATGTCAAGACCTGGT
AAGGTTCTTCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCAGT
CTTGCGACCGTACTCCCCAGGCGGAGTGCTTAATGCGTTAGCTGCAGCACTAAGGGGCGGAAACCCCCTAACACTTAGCA
CTCATCGTTTACGGCGTGGACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACAG
ACCAGAGAGTCGCCTTCGCCACTGGTGTTCCTCCACATCTCTACGCATTTCACCGCTACACGTGGAATTCCACTCTCCTC
TTCTGCACTCAAGTTTCCCAGTTTCCAATGACCCTCCCCGGTTGAGCCGGGGGCTTTCACATCAGACTTAAGAAACCGCC
TGCGAGCCCTTTACGCCCAATAATTCCGGACAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCG
TGGCTTTCTGGTTAGGTACCGTCAAGGTGCGAGCAGTTACTCTCGCACTTGTTCTTCCCTAACAACAGAGCTACGATC
CGAAAACCTTCATCACTCACGCGGCGTTGCTCCGTCAGACTTTCGTCCATTGCGGAAGANTCCCTACTGCTGCCTCCCGT
ANGAGTACTGGCCG ""
- Species Most Similar:
- Bacillus Zhangzhouensis Strain Tr91C - Bacillus Zhangzhouensis Strian KBA10 - Bacillus Pumilus - Bacillus Safensis - Uncultured Bacillus
Cell Structure, Metabolism and Life Cycle
Interesting features of cell structure; how it gains energy; what important molecules it produces.
Physiology and Pathogenesis
Biochemical characteristics, enzymes made, other characteristics that may be used to identify the organism; contributions to environment (if any).
If relevant, how does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.
References
1. [Branquinho R, Sousa C, Lopes J, Pintado ME, Peixe LV, Osório H. Differentiation of Bacillus pumilus and Bacillus safensis Using MALDI-TOF-MS. Desvaux M, ed. PLoS ONE. 2014;9(10):e110127. doi:10.1371/journal.pone.0110127.]
Author
Page authored by _____, student of Prof. Kristine Hollingsworth at Austin Community College.