Staphylococcus saprophyticus: Difference between revisions
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==Cell structure and metabolism== | ==Cell structure and metabolism== | ||
Staphylococcus saprophyticus is a coagulase-negative species of Staphylococcus. Like other Staphylococci, it is Gram-positive, is globular shaped, and is a facultative anaerobe. It has abundant transporter systems to adapt to ever changing pH, osmolarity, and concentration of urea in human urine. [1] One of the adaptations is the gene expressed in the two plasmids. The plasmids contain a gene coding for aquaporin Z. The amount of water channels created is regulated by the number of copies of the plasmids. [1] To regulate pH, S saprophyticus contains two Na+/H+ antiporters which keep the cell at homeostasis by the uptake of protons. [1] Bacteria need iron for survival. S. saprophyticus lacks siderophores, but uses other means to acquire iron. It has both a pH-driven symporter and a sodium-dependent symporter to transport divalent cations, including iron, into the cell. [1] These transport systems allow for S. saprophyticus to grow rapidly in the urinary tract. | ''Staphylococcus saprophyticus'' is a coagulase-negative species of Staphylococcus. Like other Staphylococci, it is Gram-positive, is globular shaped, and is a facultative anaerobe. It has abundant transporter systems to adapt to ever changing pH, osmolarity, and concentration of urea in human urine. [1] One of the adaptations is the gene expressed in the two plasmids. The plasmids contain a gene coding for aquaporin Z. The amount of water channels created is regulated by the number of copies of the plasmids. [1] To regulate pH, ''S. saprophyticus'' contains two Na+/H+ antiporters which keep the cell at homeostasis by the uptake of protons. [1] Bacteria need iron for survival. ''S. saprophyticus'' lacks siderophores, but uses other means to acquire iron. It has both a pH-driven symporter and a sodium-dependent symporter to transport divalent cations, including iron, into the cell. [1] These transport systems allow for ''S. saprophyticus'' to grow rapidly in the urinary tract. | ||
S. saprophyticus contains urease, which hydrolyzes urea and produces a derivative of ammonia. This is how the cell metabolizes Nitrogen. Urease activity is known to be an infection causing factor in UTIs. [1] | ''S. saprophyticus'' contains urease, which hydrolyzes urea and produces a derivative of ammonia. This is how the cell metabolizes Nitrogen. Urease activity is known to be an infection causing factor in UTIs. [1] | ||
S. saprophyticus contains an autolysin that is thought to be involved in binding fibronectin. [6] It has also been found that S. saprophyticus contains a 160-kDa surface polypeptide that acts as hemagglutinin and mediates the binding of fibronectin. The antibody to the poplypeptide inhibits hemagglutination. [7] S. saprophyticus contains a specific adhesin contributing to the adhesion to eukaryotic cells in the urinary tract. [1] | ''S. saprophyticus'' contains an autolysin that is thought to be involved in binding fibronectin. [6] It has also been found that ''S. saprophyticus'' contains a 160-kDa surface polypeptide that acts as hemagglutinin and mediates the binding of fibronectin. The antibody to the poplypeptide inhibits hemagglutination. [7] ''S. saprophyticus'' contains a specific adhesin contributing to the adhesion to eukaryotic cells in the urinary tract. [1] | ||
==Ecology== | ==Ecology== | ||
Revision as of 05:29, 29 August 2007
A Microbial Biorealm page on the genus Staphylococcus saprophyticus
Classification
Higher order taxa
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae
Species
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NCBI: Taxonomy |
Staphylococcus saprophyticus
Description and significance
Staphylococcus saprophyticus is a Gram-positive, coagulase-negative facultative species of Staphylococcus, which is a leading cause of cystisis in women and is associated with uncomplicated urinary tract infection (UTI) in humans. [3] It is the second most common pathogen associated with UTIs [5], causing 10-20% of all UTIs in sexually active young women. Like other Staphylococci, S. saprophyticus is globular and resembles clusters of grapes. S. saprophyticus colonizes in the urinary tract of humans and is isolated from urine samples. Young women are more susceptible to colonization in the urinary tracts and sexual intercourse promotes its spread. [3] S. saprophyticus is not normally present in the body. [5] It is also isolated from the carcasses of dead animals. [3]
In 1962, Torres Pereira first isolated a coagulase-negative Staphylococci with antigen 51 from women with acute UTI. [4]. This antigen was later classified as S. saprophyticus. [3] Laboratory tests to identify S. saprophyticus are based on its resistance to the antibiotic Novobiocin and the absence of coagulase. [3]
Genome structure
As of 2005, the genome of S. saprophyticus (strain ATCC 15305) has been fully sequenced by Japanese researchers. [1] S. saprophyticus contains a circular chromosome of 2,516,575 bp, 2,446 ORF’s, and two plasmids 38.4 and 22.9 kb in size. The genome was sequenced to better understand the parthenogenesis of the organism. Whole-genome shotgun sequencing was used, sequencing in 1-2 kb or 10 kb inserts. The inserts were then assembled using PHRED/PHRAP/CONSED programs. The gaps were filled by PCR direct sequencing, using specific primers at the ends of each gap. [1]
The genome of S. saprophyticus contains many mobile elements including Staphylococcal cassette chromosomes (SCCs), an insertion sequence and a genomic island. The SCCs are thought to have integrated into the genome through a two-step process and contain a restriction enzyme modification system and a cassette chromosome recombinase (Ccr). [1] The SCCs are responsible for contributing to pathenogenicity and antibiotic resistance in Staphylococci. The genomic island in S. saprophyticus is associated with resistance to the antibiotics streptomycin and fosfomycin unlike the genomic islands in other Staphylococci genomes, which are associated with pathenogenicity, such as in Staphylococci aureus. [2] These mobile elements allow for lateral gene transfer between other bacterial species.
The two plasmids carry the gene for an aquaporin which regulates the osmolarity of the cell. Multiple copies of the plasmids provide for expression of more water channels. [1]
Cell structure and metabolism
Staphylococcus saprophyticus is a coagulase-negative species of Staphylococcus. Like other Staphylococci, it is Gram-positive, is globular shaped, and is a facultative anaerobe. It has abundant transporter systems to adapt to ever changing pH, osmolarity, and concentration of urea in human urine. [1] One of the adaptations is the gene expressed in the two plasmids. The plasmids contain a gene coding for aquaporin Z. The amount of water channels created is regulated by the number of copies of the plasmids. [1] To regulate pH, S. saprophyticus contains two Na+/H+ antiporters which keep the cell at homeostasis by the uptake of protons. [1] Bacteria need iron for survival. S. saprophyticus lacks siderophores, but uses other means to acquire iron. It has both a pH-driven symporter and a sodium-dependent symporter to transport divalent cations, including iron, into the cell. [1] These transport systems allow for S. saprophyticus to grow rapidly in the urinary tract.
S. saprophyticus contains urease, which hydrolyzes urea and produces a derivative of ammonia. This is how the cell metabolizes Nitrogen. Urease activity is known to be an infection causing factor in UTIs. [1]
S. saprophyticus contains an autolysin that is thought to be involved in binding fibronectin. [6] It has also been found that S. saprophyticus contains a 160-kDa surface polypeptide that acts as hemagglutinin and mediates the binding of fibronectin. The antibody to the poplypeptide inhibits hemagglutination. [7] S. saprophyticus contains a specific adhesin contributing to the adhesion to eukaryotic cells in the urinary tract. [1]
Ecology
Describe any interactions with other organisms (included eukaryotes), contributions to the environment, effect on environment, etc.
Pathology
How does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.
Application to Biotechnology
Does this organism produce any useful compounds or enzymes? What are they and how are they used?
Current Research
Enter summaries of the most recent research here--at least three required
References
[2] Novick, R. P. (2003) Plasmid 49:, 93-105.
[4] Torres Pereira A. Coagulase-negative strains of staphylococcus possessing antigen 51 as agents of urinary infection. J Clin Pathol 1962; 15:252
Edited by Paul Wong, student of Rachel Larsen, UCSD.
