Yersinia Pestis (Pathogenesis)

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University of Oklahoma Study Abroad Microbiology in Arezzo, Italy[1]

Scanning electron microscope image of Yersinia pestis. From: www.mirror.co.uk [2]

Etiology/Bacteriology

Taxonomy

| Domain = Bacteria | Phylum = Proteobacteria | Class = Gammaproteobacteria | Order = Enterobacteriales | Family = Enterobacteriaceae | Genus = Yersinia | species = Yersinia pestis

NCBI: Taxonomy Genome: Genome

Description

Yersinia pestis is a zoonotic pathogen that is most commonly transmitted through fleas that fed on infected rodents. Y. pestis is a Gram-negative rod, facultative anaerobe that is non-motile and non-spore-forming. In the past, this pathogen ravaged cities located throughout Europe, Asia, and Africa. Sudden outbreaks of infection would occur, taking thousands of lives. Without proper antibiotic treatment, infection by Y. pestis would usually lead to death within a few days. Humans are infected through the bite of an infected flea or by inhalation of bacteria-infested droplets. The infection exists in three major plague forms: bubonic, septic, and pneumonic. The bubonic plague is the most common form of infection and targets the victim’s lymphatic system. After being taken up by macrophages, the bacteria proliferate in the affected lymph nodes, causing inflammation and swelling to occur, i.e., buboes. The septic plague course through the body via the bloodstream, disseminating from infected lymph nodes. Victims of septic plague are usually covered with black patches due to hemorrhages throughout the skin, leading to its “Black Death” nickname. Occasionally, Y. pestis causes infection of the lungs, resulting in the pneumonic plague. What distinguishes plague from other invasive, systemic, infectious diseases is that the bacteria replicate extracellularly in tissues following lysis of macrophages and hence the microbial population in the affected host is enormous. Most often, victims do not survive plague without treatment. In today's society, infection usually occurs in summer when the chances of being bitten by a flea are higher in warmer weather.[1]

Pathogenesis

Transmission

Fleas

Y. pestis is most commonly transmitted to humans through the bites of infected fleas, resulting in either primary bubonic plague or septicemic plague [2]. In the midgut of its principal flea vector (Xenopsylla cheopis), Y. pestis survives cytotoxic digestion of blood plasma through the action of Yersinia murine toxin (Ymt) (2). Ymt is a plasmid-encoded phospholipase D (PLD) [3]. Through the action of this PLD, Y. pestis is able to colonize the flea midgut, which may have caused the bacterium to obligately transmit to arthropods [3]. The hemin storage system locus (hms) also contributes to the pathogenicity of Y. pestis in fleas (3). Y. pestis hms encodes for a storage system that synthesizes extracellular saccharides in order to facilitate colonization of the proventriculus in the foregut (3). The formation of biofilms in the proventriculus contributes to the transmission of the plague in fleas [4].

Fluid/Tissue

Y. pestis can be transmitted to humans through the handling of fluids or tissue from infected animals[2]. Once Y. pestis has entered the human host, the bacterium spreads throughout the lymphatic system and enters the bloodstream within 2-6 days [5]. The spread of Y. pestis throughout the lymphatic system triggers a large-scale immune response with the appearance of buboes on the armpits, groin, and neck [6]. Increased numbers of bacteria in the bloodstream promote the odds of human-human transmission [6]. Contact with contaminated fluid or tissue typically results in bubonic plague or septicemic plague [2].

Infectious Droplets

Y. pestis can also be transmitted through the air via infectious droplets from coughing[2]. Transmission of infectious droplets is the only method of spreading the plague from person to person[2]. Transmission of infectious droplets through coughing enables Y. pestis to colonize the lungs[6]. This type of infection is called “pneumonic plague” and has a mortality rate close to 100 percent [2], [6].

Infectious dose, incubation, colonization

In humans, the infectious dose of Y. pestis has been estimated to range from 100 organisms to 20,000 organisms[8]. The incubation period of the bubonic, septicemic, and pneumonic plague types ranges from 2-6 days[5]. Y. pestis colonizes macrophages, reaches lymph nodes, escapes the macrophages and proliferates extracellularly[9]. Left untreated, Y. pestis is able to spread to the bloodstream and cause secondary infection as well as septicemic plague, in rare cases[10]. Y. pestis is also able to colonize lung tissue as pneumonic plague[2].

Steps in Pathogenesis

Most mammals can be infected. Colonization and growth of Y. pestis in the flea proventriculus (valve between oesophagus and midgut) blocks passage of food, which results in efficient transmission via flea bite. Phospholipase D is not exported but somehow helps the bacteria to withstand antibacterial factors active in the flea midgut and haemin storage locus (hms) is required to colonize and for biofilm formation in the flea. Y. pestis disseminates from the site of infection within macrophages and this requires plasminogen activator, encoded by pPst plasmid. Once phagocytized the disease progresses the same from bite or ingestion or inhalation. There are two stages of Y. pestis proliferation in the host. Neutrophils kill the bacteria, but macrophages phagocytize them but do not kill them and there it grows intracellularly within spacious vacuoles. The reason that dogs are unaffected by plague is because dog macrophages fail to release the bacteria from the spacious vacuole. In susceptible hosts, infected macrophages are carried to the lymph nodes --hence, buboes--, and the liver and spleen, where the bacteria cause the macrophages to lyse and then the bacteria grow extracellularly. Extracellular growth requires plasmid pCD/pYV encoded TTSS and translocation of YOPs. Yops interfere with immune cell function and can cause immune cell death by apoptosis. LcrV (V antigen) has anti-inflammatory activity via CD14 and TLR-2 to raise IL-10 levels. pFra capsule is anti-phagocytic, preventing extracellular bacteria from being phagocytosed. LPS is less toxic than other Enterobacteriaceae to facilitate high grade bacteremia. Collectively, these virulence factors allow massive extracellular proliferation of the bacteria in affected tissues. [This synopsis is provided by Kenneth D. Clinkenbeard, Dept. of Veterinary Pathobiology, Center for Veterinary Health Sciences, Oklahoma State University, Stillwater, OK, USA]

Virulence factors

Adhesion/invasion

The plasminogen activator (Pla) protein of Y. pestis facilitates the adhesion and invasion of the bacterium to the extracellular matrix of host tissues [18]. Pla induces the activation of plasminogen into plasmin, which causes proteolysis and damage to host tissues (18). In addition, Pla contributes to Y. pestis’s ability to invade epithelial cells [19].

Nutrient acquisition

Yersiniabactin (Ybt) is a siderophore that acquires iron produced by the host[20]. Ybt is secreted by Y. pestis to scavenge iron in the host, and once it binds iron, it returns to the bacterial cell[20]. Iron acquisition is a crucial component of initial colonization via the tissues, as Ybt-defective strains cannot spread from the initial site of infection[20].

Type III secretion system

Y. pestis utilizes a type III secretion system (T3SS) in order to evade host immune responses. The plasmid of Yersinia virulence (pYV) encodes the following components of the T3SS [14]. Yersinia secretion (Ysc) proteins construct the secretion organelles [15]. Effector Yersinia outer proteins (Yops) interfere with host cell signaling[15]. Translocators deliver the effectors across the host cell membrane [15]. Chaperones assist with transportation of the effectors and translocators, and regulatory components regulate the system [15]. These can cause host immune cell death via apoptosis.

Yop effectors

The Yop effectors YopH, YopE, YpkA, and YopM contribute to the virulence of Y. pestis, while YopJ’s role is debated[16]. YopH disrupts focal complexes and inhibits pro-inflammatory signaling to help Y. pestis avoid host phagocytosis and inflammation [17]. YopE and YpkA disrupt actin microfilaments so Y. pestis will avoid phagocytosis [17]. YopM migrates to the nucleus and interferes with the eukaryotic cell cycle [17]. YopJ inhibits MAPK and NF-κB signaling pathways, inducing apoptosis of macrophages and contributing to anti-inflammation[17].

Anti-phagocytic antigens

The anti-phagocytic antigens Factor 1 (F1) and V-antigen (LcrV) also contribute to the virulence of Y. pestis. The bacterium exports F1, and it is assembled into a capsule-like structure[21]. This structure increases Y. pestis resistance to phagocytosis by macrophages[21]. LcrV also increases resistance to phagocytosis as well as downregulation of the inflammatory response [22]. LcrV works with the adhesin YadA and the Yop effectors to facilitate this response[21].

Epidemiology

From: http://commons.wikimedia.org/wiki/File:World_distribution_of_plague_1998.PNG

United States

In the United States, natural Y. pestis loci exist in primarily rural and uninhabited areas[11]. From 1994 to 1999, 49 reported cases of plague occurred in Arizona, California, Colorado, New Mexico, and Utah, resulting in three deaths[12]. In 2006, California, Colorado, New Mexico, and Texas reported 13 cases of plague and two deaths[13]. 10-15 cases of plague on average are reported each year in the United States[11].

Worldwide

Internationally, cases of plague are typically reported from developing countries in Africa and Asia [11]. From 1990-1995, 12,998 cases worldwide were reported to the World Health Organization (WHO). Countries that had the highest incidences of plague were India, Zaire (now the Democratic Republic of the Congo), Peru, Malawi, and Mozambique [11]. In 2003, 2118 cases were reported with 182 deaths worldwide[11]. 98.7 percent of cases and 98.9 percent of deaths were reported from Africa (10). Australia is the only continent that has never reported a case of plague [11].

Clinical features

Symptoms

The symptoms of Yersinia pestis present in different ways, but the three most common are bubonic, septicemic, and pneumonic plague. [23]

Bubonic Plague

This type of plague usually results from the bite of an infected flea. Once infection sets, the patient has sudden onset of fever, headache, chills, weakness, and the development of swollen nodes known as buboes, where isolated bacteria multiply and grow. If not treated the bacteria can spread to other areas [23] .

Septicemic Plague

This type of plague can either develop primarily or as a result from untreated bubonic plague. Symptoms from this include bleeding into the skin and other organs ranging to tissue blackening and death, especially in the fingers, toes, and the nose. [23]

Pneumonic Plague

This type of plague either develops from inhaling infectious droplets or from untreated bubonic/septicemic plague and bacteria spreading to the lungs. At this point the plague is infectious and can be spread from person to person by infectious droplets. Symptoms from this type of plague include fever, headache, weakness, and a developing pneumonia that heightens symptoms of cough, chest pain and shortness of breath. [23]

Morbidity and Mortality

Worldwide, the number of cases reported to the World Health Organization range between 1000 and 2000 per year. However, according to WHO, the real number is likely much higher. Because of this, it is difficult to assess mortality rate, especially in developing countries with poor diagnostics and under reporting. The mortality rate cited by WHO, is between 8-10%, but again, the predicted percentage is expected to be much higher. [24]

Diagnosis

Diagnoses of the plague are usually reported to a state public health lab. The most common sign of the plague is the development of bubo, swollen lymph nodes, after a fleabite. Usually, blood from the patient and parts of the swollen lymph nodes are submitted to a Level A lab for testing. For a culture ID, blood is checked for a positive blood culture, with BACTEC Media and SEPTI-CHEK BHI. Next, it is cultured on TSA w/5% Sheep Blood/MacConkey II Agar, and incubated for 24 hours at 28°C. The colonies should be gray-white, translucent, little to no hemolysis, and be non-lactose fermentor. Afterwards, it should test positive for catalase, but negative for oxidase and Christensen’s Urea Slant.[25]

Treatment

Antibiotics

Individuals suspected of infection from Yesinia pestis should be immediately admitted to hospitals for isolation and proper management. A number of powerful antibiotics are used to treat the illness, with streptomycin usually prescribed as the primary drug of choice. Other possible antibiotics include gentamicin, chloramphenicol, tetracyclines, and fluoroquinolones. [26] The antibiotic levofloxacin has also been recently approved by the Food and Drug Administration as appropriate treatment.[27] Antibiotic dosages are typically administered for the full period of ten days or for three days after the fever has subsided. However, the selection of antibiotic therapy is crucial, as several classes of antibiotics have proven to be ineffective in treatment for the plague. These include penicillins, cephalosporins, and macrolides.[28]

Prophylaxis

Prophylactic therapy is a common mode of treatment for individuals who have been exposed to potentially infected individuals. Patients with possible exposure to Y. pestis should be administered antibiotics if the exposure occurred within the span of six days as a means of preventative therapy.

The usage of prophylactic therapy may also be used as a preventative measure for individuals who must be, for short periods of time, involved in circumstances where the potential of infection may be unavoidable.[28]

Prevention

Yersinia pestis can be transmitted to humans from the bites of inflected fleas or handling of plague-infected tissues. In the case of plague pneumonia, transmission can occur via inhalation of the cough droplets from another infected individual. While no available vaccine currently exists, several effective means of prevention are to diminish the possibility of rodent infestation around homes by clearing away cluttered debris within the vicinity and to apply flea control products for pets that roam freely in the open. The application of insect repellent for individuals in outdoor areas is an effective measure for protection against flea bites. Any contact with potentially infected animals should be limited, and the usage of gloves as a barrier against possible transmission should be utilized when necessary.[26]

Means of prevention can also be applied in hospital settings where the possibility of transmission can be high. Standardized procedures of handwashing and utilization of gowns, latex gloves, and protective devices should be followed to protect all body orifices from coming into contact with Y. pestis. Restrictions of patients suspected with plague should be enacted to prevent the spread of disease to other individuals. This includes isolated treatment of infected patient as well as the inhibition of movement of the patient outside of the isolation room until the infection ceases to exist.[28]

Host Immune Response

The host innate immune response involves macrophages, inflammation, and the activation of the complement cascade. However, Yersinia pestis has evolved different mechanisms for evading the immune system, both the innate and adaptive immune responses.[29]

Attack on Innate Immune Response

Most of the Y. pestis bacteria are killed off by encounter with neutrophils and many that survive are a special subtype (facultative Y. pestis). Using the macrophages, they are then able to proliferate and express different virulence factors, before they spread systemically throughout the body. In addition, the LPS (lipopolysaccharide) structure in this organism allows the bacteria to become resistant to serum-mediated lysis during its transition from its flea vector to animal host. The bacteria coming from the macrophages, therefore, are resistant to phagocytosis and can inhibit the production of proinflammatory cytokines, which in turn attenuates the adaptive immune response of the host. Yet another immune response that is affected is the complement pathways. The complement cascade of the innate immune response (which is initiated by macrophages binding to foreign antigen) has three different effector functions: opsonization (which leads to phagocytosis), inflammation, and the formation of a membrane-attack complex (which leads to direct killing of the pathogen). However, Y. pestis has developed a resistance to complement-mediated lysis, which allows it to survive transmission from flea to animal. In addition, during replication within a macrophage, the bacteria form a needle-like TTSS complex that (once released from the macrophage) they use to inject six different effector proteins into host immune cells to further inhibit the immune response. These proteins are called Yops proteins that benefit the pathogen by inhibiting immune function. Targets for this injection include macrophages, dendritic cells, and neutrophils. Besides paralyzing these phagocytic cells, these proteins also target the proinflammatory recruitment response initiated by infected cells. Finally, these proteins also target NK cells, which further inhibit the innate immune response. [29]

Attack on Adaptive Immune Response

Because the innate immune response is so severely affected, the adaptive immune system cannot be properly initiated. Dendritic cells (which are the cells that link between the innate and adaptive immune response) are targeted early on, and as a result the activation of the adaptive immune response is hindered because dendritic cells cannot mature and start T-cell mediated immune response. Because of this, the humoral response (B-cell response) cannot be properly triggered.[29,[30].

Host Immune Response

In order to combat Y. pestis infection, the host cell must reactivate specific humoral and cellular response mechanisms to establish protective immunity. This involves neutralizing virulence factors and delivering antibody/antigen complexes to B cells, macrophages, and dendritic cells (which promotes T-cell activation).[30] Often times, this activation is a result of the pathology of the organism. Although the bacterium attenuates the inflammatory response and causes apoptosis of naïve macrophages, activated macrophages are killed by a process known as pyroptosis. Interestingly, this process has the opposite effect and activates the previously attenuated inflammatory response, and benefits the host further by accelerating and amplifying this response to combat the bacterial infection and stimulate proper immune response pathways. Hyper-inflammation, however can result in tissue damage and organ malfunction.[30]

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Created by {Krishna Manohar, Michael Grassi, Christina Cheng, Johnson Ong}, students of Tyrrell Conway at the University of Oklahoma.