Tina Torres Bacillus thuringiensis: Difference between revisions
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Biochemical characteristics, enzymes made, other characteristics that may be used to identify the organism; contributions to environment (if any).<br> | Biochemical characteristics, enzymes made, other characteristics that may be used to identify the organism; contributions to environment (if any).<br> | ||
If relevant, how does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.<br><br> | If relevant, how does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.<br><br> | ||
Using various biochemical tests I was able to determine the following about this organism: | |||
Citrate: test used to test an organism's ability to use carbon as it's only source | |||
*soil sample - negative for citrate | |||
SIM (Sulfar, Indole, Motility) | |||
*soil sample - negative for sulfar, indole and motility | |||
Nitrate | |||
*soil sample - positive for nitrite reduction (nitrate --> nitrite) | |||
Urea: tests an organism's ability to break down or convert urea to amonia | |||
*soil sample - negative for urea | |||
TSI (Triple Sugar Iron) | |||
*soil sample - glucose fermentation with acid production | |||
Decarboxylation: tests organism's ability to produce an enzyme called decarboxylase | |||
*soil sample - Argine: positive for decarboxylase | |||
Lysine: positive for fermentation | |||
Ornithine: positive for decarboxylase | |||
Phenylalanine Deaminase: tests organism's ability to produce enzyme deaminase | |||
*soil sample - negative | |||
Oxidase: identifies organisms that produce enzyme cytochrome oxidase, which participates in the electron transport chain | |||
*soil sample - positive for cytochrome oxidase | |||
Hektoen Enteric Agar: this media is selective and differential that is used to isolate Salmonella and Shigella species | |||
*soil sample - negative and negative for fermentation | |||
MacConkey Agar: selective and differential media that is used to isolate organisms based on their ability to ferment lactose | |||
*soil sample - negative and negative for fermentation | |||
Eosin Methylene Blue Agar: selective and differential media used to isolate fecal coliforms | |||
*soil sample - positive for fermentation | |||
==References== | ==References== |
Revision as of 13:35, 8 May 2015
Classification
Domain: Bacteria, Phylum: Firmicutes, Class: Bacilli, Order: Bacillales, Family: Bacillaceae [Others may be used. Use NCBI link to find]
Species
NCBI: Taxonomy |
Bacillus thuringiensis
Habitat Information
This soil sample was collected at 289 Spring Lane, Dripping Springs, TX 78620 Temperature: 60 F Humidity: 40% Wind Speed: NE 14G 22 mph Dewpoint: 35 F GPS coordinates:
Description and Significance
When streaked on an LB plate, the colonies that formed were opaque in appearance and flat. When tested for antimicrobial properties the one antibiotic that showed the most susceptibility was Sulfisoxazole, also a small zone of inhibition was seen with Ampicillin. Linezolid and Cefamandole showed no zone of inhibition.
Bacillus thuringiensis is a gram positive, soil dwelling bacterium that is commonly used as a biological pesticide.
[File:LB_Streak_Plate.jpg]
Genome Structure
This is the forward sequence I used to determine that my soil sample was Bacillus thuringiensis:
GACGGAGCAACGCCGCGTGAGTGATGAAGGCTTTCGGGTCGTAAAACTCTGTTGTTAGGGAAGAACAAGTGCTAGTTGAATAAGCTGGCACCTTGACGGTACCTAACCAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGCAGGTGGTTTCTTAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGGGAGACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATGTGTAGCGGTGAAATGCGTAGAGATATGGAGGAACACCAGTGGCGAAGGCGACTTTCTGGTCTGTAACTGACACTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGAGGGTTTCCGCCCTTTANTGCTGAAGTTAACGCATTAAGCACTCCGCCTGGGGAGTACGGCCGCAAGGCTGAAACTCNNAGGAATTGACNGGGGCCCGCACAANCGGTGGANCATGTGGTTTAATT ACCAGGTNTTGAAATCCTCTGANAACCCTANAGATACGGCNTCTCNCNTCTNNAACATANTGAC
Consists of a 5.5-Mb chromosome and nine plasmids.
This organism is gram positive and forms endospores.
It is also found naturally in the gut of caterpillars, moths and butterflies.
Cell Structure, Metabolism and Life Cycle
This gram positive microorganism has a thick, cross linked peptidoglycan layer in the bacterial cell wall. It is harmful to many insects, it works by
Interesting features of cell structure; how it gains energy; what important molecules it produces.
Physiology and Pathogenesis
Biochemical characteristics, enzymes made, other characteristics that may be used to identify the organism; contributions to environment (if any).
If relevant, how does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.
Using various biochemical tests I was able to determine the following about this organism:
Citrate: test used to test an organism's ability to use carbon as it's only source
*soil sample - negative for citrate
SIM (Sulfar, Indole, Motility)
*soil sample - negative for sulfar, indole and motility
Nitrate
*soil sample - positive for nitrite reduction (nitrate --> nitrite)
Urea: tests an organism's ability to break down or convert urea to amonia
*soil sample - negative for urea
TSI (Triple Sugar Iron)
*soil sample - glucose fermentation with acid production
Decarboxylation: tests organism's ability to produce an enzyme called decarboxylase
*soil sample - Argine: positive for decarboxylase Lysine: positive for fermentation Ornithine: positive for decarboxylase
Phenylalanine Deaminase: tests organism's ability to produce enzyme deaminase
*soil sample - negative
Oxidase: identifies organisms that produce enzyme cytochrome oxidase, which participates in the electron transport chain
*soil sample - positive for cytochrome oxidase
Hektoen Enteric Agar: this media is selective and differential that is used to isolate Salmonella and Shigella species
*soil sample - negative and negative for fermentation
MacConkey Agar: selective and differential media that is used to isolate organisms based on their ability to ferment lactose
*soil sample - negative and negative for fermentation
Eosin Methylene Blue Agar: selective and differential media used to isolate fecal coliforms
*soil sample - positive for fermentation
References
Author
Page authored by _____, student of Prof. Kristine Hollingsworth at Austin Community College.