Pseudomonas putida alesha & gwen: Difference between revisions

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==Genome Structure==
==Genome Structure==
[1] According to the Pseudomonas Genome Database the size of ''Pseudomonas putida KT2440'' genome is 6,181,863 nucleotide pairs. Of that, there is a 61.5% guanine and cytosine pairing and the other 38.5% is adenine and thymine.   Circular or linear?  Other interesting features?  What is known about its sequence? Include S Ribosomal sequence that you obtained from PCR and sequencing here.
[1] According to the Pseudomonas Genome Database the size of ''Pseudomonas putida KT2440'' genome is 6,181,863 nucleotide pairs. Of that, there is a 61.5% guanine and cytosine pairing and the other 38.5% is adenine and thymine. ''P. putida'' has a single circular chromosome. It is the first gram negative bacteria certified as a biosafety host for cloning of foreign genes [2].  What is known about its sequence? Include S Ribosomal sequence that you obtained from PCR and sequencing here.


Gwen
Gwen

Revision as of 18:08, 20 April 2016

This student page has not been curated.

Classification

Domain; Phylum; Class; Order; family [Others may be used. Use NCBI link to find]

Domain: Bacteria

Phylum: Proteobacteria

Class: Gammaproteobacteria

Order: Pseudomonadales

Family: Pseudomonadaceae

Genus: Pseudomonas


Species

NCBI: Taxonomy

Genus species

Pseudomonas putida

Habitat Information

Describe the location and conditions under which the organism was isolated.

Alesha

Description and Significance

Describe the appearance (colonial and cellular), possible antimicrobial activity etc. of the organism, and why the organism might be significant.

Alesha

Genome Structure

[1] According to the Pseudomonas Genome Database the size of Pseudomonas putida KT2440 genome is 6,181,863 nucleotide pairs. Of that, there is a 61.5% guanine and cytosine pairing and the other 38.5% is adenine and thymine. P. putida has a single circular chromosome. It is the first gram negative bacteria certified as a biosafety host for cloning of foreign genes [2]. What is known about its sequence? Include S Ribosomal sequence that you obtained from PCR and sequencing here.

Gwen

Cell Structure, Metabolism and Life Cycle

Interesting features of cell structure; how it gains energy; what important molecules it produces.

Gwen

Physiology and Pathogenesis

Biochemical characteristics, enzymes made, other characteristics that may be used to identify the organism; contributions to environment (if any).
If relevant, how does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.

Alesha

References

[1] Winsor GL, Griffiths EJ, Lo R, Dhillon BK, Shay JA, Brinkman FS (2016). Pseudomonas Genome DB. The Brinkman Lab at Simon Fraser University. n.d. Web. 20 April 2016. <http://www.pseudomonas.com/strain/show/110>

Author

Page authored by _____, student of Prof. Kristine Hollingsworth at Austin Community College.