Lactobacillus johnsonii
A Microbial Biorealm page on the genus Lactobacillus johnsonii
Classification
Higher order taxa
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
Species
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NCBI: Taxonomy |
Lactobacillus johnsonii
Description and significance
Lactobacillus johnsonii is one of the many microorganisms that reside in the human intestines. Like all species of the Lactobacillus genus, it is an anaerobic, Gram-positive bacteria, which has a rod-like shape and does not undergo spore formation (1). The human Gastrointestinal tract in which L. johnsonii resides is abundant with nutrients and relies upon more than 500 microbial species that inhabit it in order to develop and function properly. Specifically L. johnsonii and other GI tract microbes aid in polysaccharide and protein digestion and also generate a variety of nutrients, including vitamins and short-chain fatty acids that make up 15% of a human’s total caloric intake. In addition, because L. johnsonnii are able to undergo fermentation and can therefore make lactic acid, they play a major role in the fermentation and preservation of various food items, such as dairy, meat and vegetable, and cereal products (1, 2). Finally, L. johnsonii is characterized as being part of the “acidophilus complex” of the Lactobacillus genus. This complex is comprised of six Lactobacillus species that are thought to be involved in probiotic activities, meaning they are able to undergo processes that are beneficial to a human’s general health and well-being (2, 3). Such probiotic benefits particularly attributed to L. johnsonii include immunomodulation, pathogen inhibition, and epithelial cell attachment (2).
Genome structure
The genome of L. johnsonii strain NCC 533 was sequenced by the Nestle Research Center in Switzerland through the method of shotgun sequencing. The 1,992,676 base pair genome has a circular topology and is composed of 1,821 protein coding genes with 79 tRNAs (2, 4, 14). The Lactobacillus genus as a whole is characterized by its low Guanine+Cytosine content. L. johnsonii, in particular, contains a G+C content of 34.6% (2). Interestingly, L. jonsonii contains no genes which encode for the biosynthetic pathways necessary to generate amino acids and necessary cofactors. Rather, the genome contains many amino acid proteases, peptidases, and phosphotranferase transporters and hence requires amino acids and peptides that come from its environment. In addition, genome sequencing has revealed that L. johnsonii contains all of the genes necessary for the synthesis of pyrimidines, but lacks genes necessary for the synthesis of purines. Thus, L. johnsonni also must depend on its environment in order to acquire purine nucleotides. Since this organism must obtain amino acids and purine nucleotides from exogenous sources, it is thought that it relies on its human host or other intestinal microorganisms in order to obtain such monomeric nutrients (2).
Cell structure and metabolism
The cell surface of L. johnsonni contains various types of cell-surface proteins which are important in helping the microorganism attach to the mucosal surfaces of the GI tract. In addition, these cell-surface proteins can play a role in stimulating immune cells and can thus be one of the mechanistic explanations underlying L. johnsonii’s probiotic property of immunomodulation. Examples of these cell-surface proteins include mucus-binding proteins, glyosylated fimbriae, and an IgA protease (2).
As an anaerobic, lactic acid producing bacteria, L. johnsonii obtains its energy by fermenting disaccharides and hexoses to lactic acid. Specifically, the sugars it uses as substrates include galactose, maltose, sorbose/sorbitol, gentiobiose, isoprimerevose, isomaltose, and panose (2). L. johnosnii’s ability to undergo fermentation and thus produce lactic acid makes it a widely used microorganism in the industrial fermentation of dairy, meat, and vegetable products (3). However, as mentioned above, L. johnsonii lacks the biosynthetic pathways necessary for the generation of essential nutrients such as amino acids, purine nucleotides, and cofactors. Because of this, the genes which code for transporters in this microorganism are highly expressed and thus L. johnsonii contains a great number of certain transporters that are less frequent in other microorganisms. Specifically, it contains an abundance of AA-permease transporters and phosphotransferase (PTS)-type transporters. In addition, this microorganism has numerous various proteinases, peptide tranporters and peptidases in order to acquire nutrients from exogenous sources (2).
Ecology
Due to its metabolic limitations and reliance on exogenous sources of nutrients, L. johnsonii is typically found in human and animal gastrointestinal tracts. As an auxotrophic bacteria that lacks certain enzymes needed for the digestion of complex carbohydrates, it is unable to compete with other GI tract bacteria such as Bifidobacteria, which inhabit the colon. Therefore L. johnsonii resides in the upper GI tract, which is rich in amino acids and peptides. Specifically, it is one of the dominant microorganisms found at the junction between the ileum of the small intestine and the cecum of the colon (2). Other species within the Lactobacillus genus can be found in food, vegetation, sewage, and other areas of the human body. In humans, Lactobacillus species can be found in the intestine, oral cavity, and the vagina (1). L. johnsonii, in particular, has many genes and transporters that allow it to release bile salt hydrolase, an important enzyme that is characteristic of microorganisms that live in the GI tract. Since L. johnsonii devotes many genes for the encoding of bile salt hydrolase, its importance and ability to compete and survive in its ecosystem can be correlated with its ability to produce such large amounts of this essential enzyme.
In addition, Lactic acid bacteria, such as L. johnsonii are able to produce bacteriocins which have antibacterial properties which act against other microorganisms, thus providing them with ways to survive in their ecosystem. For example, L. johnsonii is able to produce Lactacin F, a bacteriocin which can kill other Lactobacillus species as well as Enterococcus species in the GI tract. Thus, this microbe is thought to use this bacteriocin as a way to compete in the microbe-rich environment in which it lives (2, 5). Some lactic acid bacteria have been shown to use quorum sensing as a regulator for the expression of genes involved in the production of bacteriocins. For example, some species of the Lactobacillus genus such as Lactobacillus sake have been shown to utilize quorum sensing as a means of regulating bacteriocin gene expression (6).
Pathology
How does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.
Application to Biotechnology
Does this organism produce any useful compounds or enzymes? What are they and how are they used?
Current Research
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References
Edited by student of Rachel Larsen and Kit Pogliano
