Halomonas titanicae: Difference between revisions

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===Higher order taxa===
===Higher order taxa===
Domain; Phylum; Class; Order; family [Others may be used.  Use [http://www.ncbi.nlm.nih.gov/Taxonomy/ NCBI] link to find]


Domain: Bacteria
Domain: Bacteria
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Genus: Halomonas
Genus: Halomonas


Species: ''H. titanicae''
Species: ''Halomonas titanicae'' [1]


===Species===
===Species===


H. titanicaeNEUF2011
''H. titanicae''


{|
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'''NCBI: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=2&lvl=3&lin=f&keep=1&srchmode=1&unlock Taxonomy]'''
'''NCBI: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=2&lvl=3&lin=f&keep=1&srchmode=1&unlock Taxonomy]'''
|}
|}
''Genus species''


==Description and significance==
==Description and significance==
Describe the appearance, habitat, etc. of the organism, and why you think it is important.


''Halomonas titanicae'' is a gram-negative, bacilli shaped bacterium from strain BH1T. It's 0.5–0.8×1.5–6.0 μm in size It’s a motile microorganism which moves by flagella, and it has a peritrichous appearance. It inhabits the ocean at depths near the ocean floors thus it is psychrophilic, thriving at low temperatures. This bacterium collects on the side of metal surfaces, and was discovered on the ship the RMS Titanic. This bacterium was isolated from porous structures of corrosive by-product called rusticles. Rusticles also house 27 other species bacteria.
''Halomonas titanicae'' is a gram-negative, bacilli shaped bacterium from strain BH1T. It's 0.5–0.8×1.5–6.0 μm in size. It’s a motile microorganism which moves using flagella, and has a peritrichous appearance. It is a psychrotolerant mesophile, it grows best between 30-37 degrees Celsius but is capable of growth at temperatures as low as 4 degrees Celsius [2].  This enables it to survive in the cold temperatures in its habitat at the bottom of the ocean. This bacterium collects on the side of metal surfaces, and was discovered on the ship the RMS Titanic. This bacterium was isolated from porous structures of corrosive by-product called rusticles. Rusticles also house 27 other species bacteria[2,3].


''H. titanica''e is significant because it is capable of accelerating the speed of which metals are corroded. Scientists are now gaining  more information in regards to its destructive power. In 1995, Scientist had thought the structure of the titanic would 30 more years, however, with this Bacterium’s destructive ability this expectancy could be less than expected. Although a tragedy to the titanic, this new bacterium can be utilized to recycle the metal on other sea wreaks sitting idle on the ocean floor. By studying the structure and capabilities of ''H. titanicae'' new paints and coatings can be created that will abate in preserving ships and prevent against their degradation.
''H. titanicae'' is significant because it is capable of accelerating the speed of which metals are corroded. Scientists are now gaining  more information in regards to its destructive power. In 1995, scientists had thought the structure of the titanic would last 30 more years. However, with this bacterium’s destructive ability, it could be deteriorating faster than predicted[3]. Although a tragedy to the Titanic, this new bacterium can be utilized to recycle the metal on other sea wrecks sitting idle on the ocean floor. By studying the structure and capabilities of ''H. titanicae'' new paints and coatings can be created that will aid in preserving ships and prevent against their degradation.


Due to its environment this bacterium is difficult to grow under laboratory conditions. Further research on it is difficult because it's challenging to reproduce colonies in a setting other than its natural habitat.  
Due to its environment this bacterium is difficult to grow under laboratory conditions. Further research on it is difficult because it's challenging to reproduce colonies in a setting other than its natural habitat.  


[[File:Halomonas 0.jpg|thumb|The image on the left displays a negative stain electro micrograph of H.titanicae (courtesy the Society for General Microbiology). The middle image provides a photograph of the rusticles found on the RMS Titanic (courtesy of RMS Titanic Inc). The image on the right is a single bacterium seen under environment scanning electric microscope (courtesy of Dr. Henrietta Mann.
[[File:Halomonas 0.jpg|thumb|350 px|The image on the left displays a negative stain electro micrograph of ''H.titanicae'' (courtesy the Society for General Microbiology). The middle image provides a photograph of the rusticles found on the RMS Titanic (courtesy of RMS Titanic Inc). The image on the right is a single bacterium seen under environment scanning electric microscope (courtesy of Dr. Henrietta Mann.
Entire image courtesy of http://species.asu.edu/2011_species03]]
Entire image courtesy of http://species.asu.edu/2011_species03]]


==Genome structure==
==Genome structure==
Describe the size and content of the genome.  How many chromosomes?  Circular or linear?  Other interesting features?  What is known about its sequence?


The genome size is 1453 base pairs (bp) and is linear. Due to of the high variability of the 16S rRNA gene it was amplified and analyzed to classify the bacterium as a Halomonas (its closest relative being ''H. neptunia''). The C+G content of the strain that this bacterium is from has been found to be 60.0 mol%. This high C+G content enable the bacterium in being stable in the extreme environment it lives in.
The genome size is 1453 base pairs (bp) and is linear [2]. Due to of the high variability of the 16S rRNA gene it was amplified and analyzed to classify the bacterium as a Halomonas (its closest relative being ''H. neptunia''). The C+G content of the strain that this bacterium is from has been found to be 60.0 mol% [2]. This high C+G content enable the bacterium in being stable in the extreme environment it lives in.


==Cell structure and metabolism==
==Cell structure and metabolism==
Interesting features of cell structure; how it gains energy; what important molecules it produces.


The ''Halomonas titanicae'' bacteria are gram-negative bacilli that are typically unpigmented or yellow tinted. It is an extreme halophile,salt loving, with peritrichous flagella for motility.
The ''Halomonas titanicae'' bacteria are gram-negative bacilli, as most species in the ''Halomonas'' genus are[4]. They are typically unpigmented or yellow tinted. It is an extreme halophile (salt loving) with peritrichous flagella for motility [2].


As a chemo-organotrophic organism its metabolism is respiratory and Catalase as well as Oxidase are produced. They ferment D-galactose, D-glucose and D-fructose. They are capable of anaerobic growth with the aid of glucose but in addition they are able to perform denitrification to gain energy through taking nitrate, but not nitrite, and converting it to nitrogen.
As a chemo-organotrophic organism its metabolism is respiratory. Catalase as well as oxidase are produced. They ferment D-galactose, D-glucose and D-fructose [2]. They are capable of anaerobic growth with the aid of glucose but in addition they are able to perform denitrification to gain energy through taking nitrate, but not nitrite, and converting it to nitrogen.


It is known as a "steel munching" bacteria because it metabolizes steel rust as with the Titanic. When the bacteria breaks down the rust it gains energy in the form of electrons from the degradation iron that is present.
It is known as a "steel munching" bacteria because it metabolizes steel rust as with the Titanic. When the bacteria breaks down the rust it gains energy in the form of electrons from the degradation iron that is present.


==Ecology==
==Ecology==
Habitat; symbiosis; contributions to the environment.


''Halomonas titanicae'' inhabits a niche in the depths of the ocean where temperature is low and salt concentration is considerable. It belongs to the family Halomonadaceae, which generally inhabits environments that are salty. ''H. Titanicae's'' optimal salt concentration is 2.0-8.0%, but can function between 0.5-25.0%. This bacterium clings to metal because that’s its main energy source. ''H. Titancae'' is valuable in destroying metal located in the ocean, removing and recycling unwanted ship wrecks, oil rigs, and other metal sitting idle on the ocean floor.  Although other species of bacteria are found in the rusticles with ''H.titanicae'' it is uncertain at this point if these organisms have a symbiotic relationship. Research is still being conducted to determine of other species in the rusticles contribute to the degradation of the metal as well.
[[File:Rusticles_on_the_bow_of_the_Titanic.jpg‎ |thumb|300 px|This image is of severl rusticles that have form on the bow of the RMS Titanic now located 3.8 km below sea level. Image from http://www.dailymail.co.uk/sciencetech/article-1336542/Halomonas-titanicae-New-rust-eating-bacteria-destroying-wreck-Titanic.html]]
 
''Halomonas titanicae'' inhabits a niche in the depths of the ocean where temperature is low and salt concentration is considerable. It belongs to the family Halomonadaceae, which generally inhabits environments that are salty [5]. ''H. Titanicae's'' optimal salt concentration is 2.0-8.0%, but can function between 0.5-25.0%. This bacterium clings to metal because that’s its main energy source. ''H. Titancae'' is valuable in decomposing metal, removing, recycling and returning iron back into the environment [6,7].  Although other species of bacteria are found in the rusticles with ''H.titanicae'' it is uncertain at this point if these organisms have a symbiotic relationship [6]. Research is still being conducted to determine of other species in the rusticles contribute to the degradation of the metal as well.


==Pathology==
==Pathology==
How does this organism cause disease?  Human, animal, plant hosts?  Virulence factors, as well as patient symptoms.


Whiles some ''Halomonas'' strains have been shown to infect humans currently there is no known evidence that ''H. titanicae'' has any pathological links in infecting humans or plants. It is, however, hazardous to metals, specifically those which contain high levels of rust.
While some ''Halomonas'' strains have been shown to infect humans, currently there is no known evidence that ''H. titanicae'' has any pathological links in infecting humans or plants. It is, however, hazardous to metals, specifically those which contain high levels of rust due to its ability to deteriorate these man made structures [2,3,6]. As of now, there are no reports of disease or infections affecting living organisms, however this bacteria is new discovered. The researchers who made the discovery of the bacterium state that it is unknown if the bacterium was present on the ship prior to its sinking in 1912 [6]. The only host of this bacteria is currently known to be the ship wreck of the Titanic.


==Current Research==
==Current Research==


Enter summaries of the most recent research here--at least three required
Further research is currently being performed on the ''Halomonas'' genus and new bacteria are being discovered daily. As an extremophile group, ''Halomonas'' bacterium can grow under extreme conditions, high salt concentration, which could become significant in future biotechnological applications and mechanisms [4].


In 2010 Sanchez-Porro, et. al, were able to isolate ''H. titanicae'' and identify it as a new species. In their article these researchers give information regarding the bacterium's cell structure, size, metabolism, genome, and the niche it inhibits.
In 2010 Sanchez-Porro, et. al, were able to isolate ''H. titanicae'' and identify it as a new species. In their article these researchers give information regarding the bacterium's cell structure, size, metabolism, genome, and the niche it inhabits. Whether the bacteria were present on the ship prior to it sinking is unclear.
 
In the south Pacific regional ocean there is approximately 3,800 sunken war vessel including battle ships, tankers, oilers and air craft carriers. The fluids, oil, and explosives found on these vessels pose a threat to the environment. As these vessels decay, harmful chemicals are released into the marine environment, having detrimental effects on the wild life and fishing economy[8]. Although this article didn't directly reference ''H. titanicae'', further research can be conducted to determine if this bacterium can be an adequate bio-remediation agent.  


Further research is encouraged in the scientific community based upon the capabilities of current systems in relation to ''Halomonas titanicae''. If there were some way to prevent ''H. titanicae'' growth on certain objects on the ocean floor, and subsequent decomposition of these objects, then structures such as oil rigs and other ocean deep engineering projects could have a much longer life span.
Further research is encouraged in the scientific community based upon the capabilities of current systems in relation to ''Halomonas titanicae''. If there were some way to prevent ''H. titanicae'' growth on certain objects on the ocean floor, and subsequent decomposition of these objects, then structures such as oil rigs and other ocean deep engineering projects could have a much longer life span.
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==Cool Factor==
==Cool Factor==


Describe something you fing "cool" about this microbe.
The environment which the ''H. titanicae'' lives is very interesting. The idea that there is a living organism promoting rust at extremely low temperatures seems hard to believe since these living conditions are harsh.  


It environment which the H. titanicae lives it very interesting. The idea that there is a living organism inhibiting rust at extremely low temperatures seems hard to believe since theses living conditions are harsh.
Additionally it is really interesting that something as small as a ''Halomonas titanicae'' bacterium could basically destroy something so grand and historically momentus as the Titanic. Scientists indicate that in just a few more decades the wreck of the RMS Titanic will be no more. In some ways that's a little sad because the world is losing a part of its history, but in other ways it is kind of cool that the Earth has developed a way of recycling itself to this extent, obtaining energy from the most unlikely places.


Additionally it is really interesting that something as small as a Halomonas titanicae bacterium could basically destroy something so grand and historically momentus as the Titanic. Scientists indicate that in just a few more decades the wreck of the HMS Titanic will be no more. In some ways thats a little sad because the world is loseing a part of its history but in other ways it is kind of cool that the earth has developed a way of recycling itself to this exten, obtaining energy from the most unlikely places.
[[File:Titanic.gif‎|thumb|300 px| This is an image from the BBC of the RMS Titanic leaving port in 1912. Image courtesy of http://www.bbc.co.uk/news/uk-northern-ireland-11158758]]


==References==
==References==
[Sample reference] [http://ijs.sgmjournals.org/cgi/reprint/50/2/489 Takai, K., Sugai, A., Itoh, T., and Horikoshi, K. "''Palaeococcus ferrophilus'' gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". ''International Journal of Systematic and Evolutionary Microbiology''. 2000. Volume 50. p. 489-500.]


Edited by student of Iris Keren
Edited by student of Iris Keren


Sanchez-Porro, C., Kaur, B., Mann, H., Ventosa, A. (2010). "Halomonas titanicae sp. nov., a halophilic bacterium isolated from the RMS titanic." International Journal  of Systematic  and Evolutionary microbiology 60(12): 2768-2774.
1. "Halomonas titanicae." from http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=664683.
 
2. Sanchez-Porro, C., Kaur, B., Mann, H., Ventosa, A. (2010). "Halomonas titanicae sp. nov., a halophilic bacterium isolated from the RMS titanic." International Journal  of Systematic  and Evolutionary microbiology 60(12): 2768-2774.
 
3. (2010). "Halomonas titanicae, a new form of bacteria." from http://coolscience.com.au/halomonas-titanicae.php.
 
4. Mata, J. A., Martinez-Canovas, J., Quesada, E., Bejar, V. (2002). "A detailed Phenotypic Characterisation of the Type Strains of Halomonas Species." Systematic and Applied Microbiology
 
5. Liu, W., Wang, J., Yuan, M. (2010). "Halomonas aidingensis sp. nov., a moderately halophilic bacterium isolated from Aiding salt lake in Xinjiang, China." Springer 99(3).
 
6. (2010). "New rust-eating bacyeria 'destorying wreck of the Titianic'." from http://www.dailymail.co.uk/sciencetech/article-1336542/Halomonas-titanicae-New-rust-eating-bacteria-destroying-wreck-Titanic.html.
 
7.(2010). "New Species of Rust-Eating Bacteria Destroying the Titanic." from http://www.livescience.com/9079-species-rust-eating-bacteria-destroying-titanic.html.


Liu, W., Wang, J., Yuan, M. (2010). "Halomonas aidingensis sp. nov., a moderately halophilic bacterium isolated from Aiding salt lake in Xinjiang, China." Springer 99(3).
8.Monfils, R., Gilbert, T., Nawadra, S. (2006). "Sunken WWII shipwrecks of the Pacific and East Asia: The need ofr regional collaboration to address the potential marine pollution threat." Ocean & Coastal Magagment 49(9-10): 779-778.

Latest revision as of 02:05, 2 November 2011

This student page has not been curated.

A Microbial Biorealm page on the genus Halomonas titanicae

Classification

Higher order taxa

Domain: Bacteria

Phylum: Proteobacteria

Class: Gannaproteobacteria

Order: Oceanospirillales

Family: Halomandacae

Genus: Halomonas

Species: Halomonas titanicae [1]

Species

H. titanicae

NCBI: Taxonomy

Description and significance

Halomonas titanicae is a gram-negative, bacilli shaped bacterium from strain BH1T. It's 0.5–0.8×1.5–6.0 μm in size. It’s a motile microorganism which moves using flagella, and has a peritrichous appearance. It is a psychrotolerant mesophile, it grows best between 30-37 degrees Celsius but is capable of growth at temperatures as low as 4 degrees Celsius [2]. This enables it to survive in the cold temperatures in its habitat at the bottom of the ocean. This bacterium collects on the side of metal surfaces, and was discovered on the ship the RMS Titanic. This bacterium was isolated from porous structures of corrosive by-product called rusticles. Rusticles also house 27 other species bacteria[2,3].

H. titanicae is significant because it is capable of accelerating the speed of which metals are corroded. Scientists are now gaining more information in regards to its destructive power. In 1995, scientists had thought the structure of the titanic would last 30 more years. However, with this bacterium’s destructive ability, it could be deteriorating faster than predicted[3]. Although a tragedy to the Titanic, this new bacterium can be utilized to recycle the metal on other sea wrecks sitting idle on the ocean floor. By studying the structure and capabilities of H. titanicae new paints and coatings can be created that will aid in preserving ships and prevent against their degradation.

Due to its environment this bacterium is difficult to grow under laboratory conditions. Further research on it is difficult because it's challenging to reproduce colonies in a setting other than its natural habitat.

The image on the left displays a negative stain electro micrograph of H.titanicae (courtesy the Society for General Microbiology). The middle image provides a photograph of the rusticles found on the RMS Titanic (courtesy of RMS Titanic Inc). The image on the right is a single bacterium seen under environment scanning electric microscope (courtesy of Dr. Henrietta Mann. Entire image courtesy of http://species.asu.edu/2011_species03

Genome structure

The genome size is 1453 base pairs (bp) and is linear [2]. Due to of the high variability of the 16S rRNA gene it was amplified and analyzed to classify the bacterium as a Halomonas (its closest relative being H. neptunia). The C+G content of the strain that this bacterium is from has been found to be 60.0 mol% [2]. This high C+G content enable the bacterium in being stable in the extreme environment it lives in.

Cell structure and metabolism

The Halomonas titanicae bacteria are gram-negative bacilli, as most species in the Halomonas genus are[4]. They are typically unpigmented or yellow tinted. It is an extreme halophile (salt loving) with peritrichous flagella for motility [2].

As a chemo-organotrophic organism its metabolism is respiratory. Catalase as well as oxidase are produced. They ferment D-galactose, D-glucose and D-fructose [2]. They are capable of anaerobic growth with the aid of glucose but in addition they are able to perform denitrification to gain energy through taking nitrate, but not nitrite, and converting it to nitrogen.

It is known as a "steel munching" bacteria because it metabolizes steel rust as with the Titanic. When the bacteria breaks down the rust it gains energy in the form of electrons from the degradation iron that is present.

Ecology

This image is of severl rusticles that have form on the bow of the RMS Titanic now located 3.8 km below sea level. Image from http://www.dailymail.co.uk/sciencetech/article-1336542/Halomonas-titanicae-New-rust-eating-bacteria-destroying-wreck-Titanic.html

Halomonas titanicae inhabits a niche in the depths of the ocean where temperature is low and salt concentration is considerable. It belongs to the family Halomonadaceae, which generally inhabits environments that are salty [5]. H. Titanicae's optimal salt concentration is 2.0-8.0%, but can function between 0.5-25.0%. This bacterium clings to metal because that’s its main energy source. H. Titancae is valuable in decomposing metal, removing, recycling and returning iron back into the environment [6,7]. Although other species of bacteria are found in the rusticles with H.titanicae it is uncertain at this point if these organisms have a symbiotic relationship [6]. Research is still being conducted to determine of other species in the rusticles contribute to the degradation of the metal as well.

Pathology

While some Halomonas strains have been shown to infect humans, currently there is no known evidence that H. titanicae has any pathological links in infecting humans or plants. It is, however, hazardous to metals, specifically those which contain high levels of rust due to its ability to deteriorate these man made structures [2,3,6]. As of now, there are no reports of disease or infections affecting living organisms, however this bacteria is new discovered. The researchers who made the discovery of the bacterium state that it is unknown if the bacterium was present on the ship prior to its sinking in 1912 [6]. The only host of this bacteria is currently known to be the ship wreck of the Titanic.

Current Research

Further research is currently being performed on the Halomonas genus and new bacteria are being discovered daily. As an extremophile group, Halomonas bacterium can grow under extreme conditions, high salt concentration, which could become significant in future biotechnological applications and mechanisms [4].

In 2010 Sanchez-Porro, et. al, were able to isolate H. titanicae and identify it as a new species. In their article these researchers give information regarding the bacterium's cell structure, size, metabolism, genome, and the niche it inhabits. Whether the bacteria were present on the ship prior to it sinking is unclear.

In the south Pacific regional ocean there is approximately 3,800 sunken war vessel including battle ships, tankers, oilers and air craft carriers. The fluids, oil, and explosives found on these vessels pose a threat to the environment. As these vessels decay, harmful chemicals are released into the marine environment, having detrimental effects on the wild life and fishing economy[8]. Although this article didn't directly reference H. titanicae, further research can be conducted to determine if this bacterium can be an adequate bio-remediation agent.

Further research is encouraged in the scientific community based upon the capabilities of current systems in relation to Halomonas titanicae. If there were some way to prevent H. titanicae growth on certain objects on the ocean floor, and subsequent decomposition of these objects, then structures such as oil rigs and other ocean deep engineering projects could have a much longer life span.

Cool Factor

The environment which the H. titanicae lives is very interesting. The idea that there is a living organism promoting rust at extremely low temperatures seems hard to believe since these living conditions are harsh.

Additionally it is really interesting that something as small as a Halomonas titanicae bacterium could basically destroy something so grand and historically momentus as the Titanic. Scientists indicate that in just a few more decades the wreck of the RMS Titanic will be no more. In some ways that's a little sad because the world is losing a part of its history, but in other ways it is kind of cool that the Earth has developed a way of recycling itself to this extent, obtaining energy from the most unlikely places.


This is an image from the BBC of the RMS Titanic leaving port in 1912. Image courtesy of http://www.bbc.co.uk/news/uk-northern-ireland-11158758

References

Edited by student of Iris Keren

1. "Halomonas titanicae." from http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=664683.

2. Sanchez-Porro, C., Kaur, B., Mann, H., Ventosa, A. (2010). "Halomonas titanicae sp. nov., a halophilic bacterium isolated from the RMS titanic." International Journal of Systematic and Evolutionary microbiology 60(12): 2768-2774.

3. (2010). "Halomonas titanicae, a new form of bacteria." from http://coolscience.com.au/halomonas-titanicae.php.

4. Mata, J. A., Martinez-Canovas, J., Quesada, E., Bejar, V. (2002). "A detailed Phenotypic Characterisation of the Type Strains of Halomonas Species." Systematic and Applied Microbiology

5. Liu, W., Wang, J., Yuan, M. (2010). "Halomonas aidingensis sp. nov., a moderately halophilic bacterium isolated from Aiding salt lake in Xinjiang, China." Springer 99(3).

6. (2010). "New rust-eating bacyeria 'destorying wreck of the Titianic'." from http://www.dailymail.co.uk/sciencetech/article-1336542/Halomonas-titanicae-New-rust-eating-bacteria-destroying-wreck-Titanic.html.

7.(2010). "New Species of Rust-Eating Bacteria Destroying the Titanic." from http://www.livescience.com/9079-species-rust-eating-bacteria-destroying-titanic.html.

8.Monfils, R., Gilbert, T., Nawadra, S. (2006). "Sunken WWII shipwrecks of the Pacific and East Asia: The need ofr regional collaboration to address the potential marine pollution threat." Ocean & Coastal Magagment 49(9-10): 779-778.