Lactobacillus acidophilus: Difference between revisions

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==Description and significance==
==Description and significance==
Describe the appearance, habitat, etc. of the organism, and why it is important enough to have its genome sequenced.  Describe how and where it was isolated.
 
Include a picture or two (with sources) if you can find them.


==Genome structure==
==Genome structure==
Describe the size and content of the genome. How many chromosomes?  Other interesting features?  What is known about its sequence?
Describe the size and content of the genome.   Other interesting features?  What is known about its sequence?


The complete circular genome of the NCFM strain of L. acidophilus contains 1,993,564 nucleotides. The DNA GC content was determined to be 34.71%. There are 1,7864 ORFs and 72.5% have been classified functionally.
The complete circular genome of the NCFM strain of ''L. acidophilus'' contains 1,993,564 nucleotides. The DNA GC content was determined to be 34.71%. There are 1,7864 ORFs and 72.5% have been classified functionally.


L. acidophilus contains no plasmids.  
''L. acidophilus'' contains no plasmids.  


==Cell structure and metabolism==




==Cell structure and metabolism==
==Ecology==
Describe any interesting features and/or cell structures; how it gains energy; what important molecules it produces.


==Ecology==
Describe any interactions with other organisms (included eukaryotes), contributions to the environment, effect on environment, etc.


==Pathology==
==Pathology==
How does this organism cause disease?  Human, animal, plant hosts?  Virulence factors, as well as patient symptoms.
 


==Application to Biotechnology==
==Application to Biotechnology==
Does this organism produce any useful compounds or enzymes?  What are they and how are they used?
 


==Current Research==
==Current Research==


Enter summaries of the most recent research here--at least three required


==References==
==References==
[Sample reference] [http://ijs.sgmjournals.org/cgi/reprint/50/2/489 Takai, K., Sugai, A., Itoh, T., and Horikoshi, K. "''Palaeococcus ferrophilus'' gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". ''International Journal of Systematic and Evolutionary Microbiology''. 2000. Volume 50. p. 489-500.]
[Sample reference] [http://ijs.sgmjournals.org/cgi/reprint/50/2/489 Takai, K., Sugai, A., Itoh, T., and Horikoshi, K. "''Palaeococcus ferrophilus'' gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". ''International Journal of Systematic and Evolutionary Microbiology''. 2000. Volume 50. p. 489-500.]
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15671160&query_hl=7&itool=pubmed_docsum]


Edited by Jennifer B. Samore, student of [mailto:ralarsen@ucsd.edu Rachel Larsen] and Kit Pogliano
Edited by Jennifer B. Samore, student of [mailto:ralarsen@ucsd.edu Rachel Larsen] and Kit Pogliano

Revision as of 02:37, 3 May 2007

Classification

Higher order taxa

Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

Species

Lactobacillus acidophilus

NCBI: TaxonomyGenome

Description and significance

Genome structure

Describe the size and content of the genome. Other interesting features? What is known about its sequence?

The complete circular genome of the NCFM strain of L. acidophilus contains 1,993,564 nucleotides. The DNA GC content was determined to be 34.71%. There are 1,7864 ORFs and 72.5% have been classified functionally.

L. acidophilus contains no plasmids.

Cell structure and metabolism

Ecology

Pathology

Application to Biotechnology

Current Research

References

[Sample reference] Takai, K., Sugai, A., Itoh, T., and Horikoshi, K. "Palaeococcus ferrophilus gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". International Journal of Systematic and Evolutionary Microbiology. 2000. Volume 50. p. 489-500.

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Edited by Jennifer B. Samore, student of Rachel Larsen and Kit Pogliano