Pseudomonas chlororaphis: Difference between revisions

From MicrobeWiki, the student-edited microbiology resource
Line 23: Line 23:


Describe the appearance, habitat, etc. of the organism, and why you think it is important.
Describe the appearance, habitat, etc. of the organism, and why you think it is important.
microbewiki.kenyon.edu/index.php/pseudomonas
Rod (1)
Metabolism
Aerobic (1)
Ecology
Found in soil, water, plant tissue and animal tissue.
http://www.efsa.europa.eu/it/scdocs/doc/1431.pdf
effective biocontrol agent against Pythium aphanidermatum, the causal agent of damping-off of hot pepper in greenhouse vegetable production systems. Root colonisation by a plant-beneficial rhizobacterium. Pseudomonas chloroaphis O6, induces disease resistance in tobacco against leaf pathogens Erwinia carotovora causing soft-rot and Pseudomonas syringae pv. tabaci causing wildfire. It was reported to produce an antifungal metabolite which is a crucial trait in its competition with the pytopathogenic fungus Fusarium oxysporum in the rhizosphere. Specifically, P. chlororaphis was described to control tomato foot and root rot caused by Fusarium oxysporum by root colonisation.
http://www.efsa.europa.eu/it/scdocs/doc/1431.pdf
A Pseudomonas chlororaphis isolate, obtained from perch intestine, was evaluated with regards to its potential to control Aeromonas sobria disease in farmed perch. An infection of perch with labelled P.chlororaphis indicated the bacterium is able to transiently colonise juvenile fish and fingerlings and to reduce A. sobria associated mortalities
Used as a soil inoculant in agriculture and horticulture by acting aginast certain fungal plant pathogens via production of phenazine type antibotics. (Chin-A-Woeng TF, et al. (2000). "Root colonization by phenazine-1-carboxamide-producing bacterium Pseudomonas chlororaphis PCL1391 is essential for biocontrol of tomato foot and root rot.". Mol Plant Microbe Interact 13 (12): 1340–5. doi:10.1094/MPMI.2000.13.12.1340. PMID 11106026.)


==Genome Structure==
==Genome Structure==

Revision as of 21:43, 18 April 2010

==Classification== http://www.efsa.europa.eu/it/scdocs/doc/1431.pdf


Kingdom: Bacteria

Phylum: Proteobacteria

Class: Gamma Proteobacteria

Order: Pseudomonadales

Family: Pseudomonadaceae

Species

Pseudomonas chloroaphis

Sub Groups: aurantiaca, aureofaciens, chlororaphis, fragi, lundensis, taetrolens

Description and Significance

Description

Describe the appearance, habitat, etc. of the organism, and why you think it is important.

microbewiki.kenyon.edu/index.php/pseudomonas Rod (1)

Metabolism

Aerobic (1)

Ecology

Found in soil, water, plant tissue and animal tissue.

http://www.efsa.europa.eu/it/scdocs/doc/1431.pdf effective biocontrol agent against Pythium aphanidermatum, the causal agent of damping-off of hot pepper in greenhouse vegetable production systems. Root colonisation by a plant-beneficial rhizobacterium. Pseudomonas chloroaphis O6, induces disease resistance in tobacco against leaf pathogens Erwinia carotovora causing soft-rot and Pseudomonas syringae pv. tabaci causing wildfire. It was reported to produce an antifungal metabolite which is a crucial trait in its competition with the pytopathogenic fungus Fusarium oxysporum in the rhizosphere. Specifically, P. chlororaphis was described to control tomato foot and root rot caused by Fusarium oxysporum by root colonisation.

http://www.efsa.europa.eu/it/scdocs/doc/1431.pdf A Pseudomonas chlororaphis isolate, obtained from perch intestine, was evaluated with regards to its potential to control Aeromonas sobria disease in farmed perch. An infection of perch with labelled P.chlororaphis indicated the bacterium is able to transiently colonise juvenile fish and fingerlings and to reduce A. sobria associated mortalities

Used as a soil inoculant in agriculture and horticulture by acting aginast certain fungal plant pathogens via production of phenazine type antibotics. (Chin-A-Woeng TF, et al. (2000). "Root colonization by phenazine-1-carboxamide-producing bacterium Pseudomonas chlororaphis PCL1391 is essential for biocontrol of tomato foot and root rot.". Mol Plant Microbe Interact 13 (12): 1340–5. doi:10.1094/MPMI.2000.13.12.1340. PMID 11106026.)

Genome Structure

Describe the size and content of the genome. How many chromosomes? Circular or linear? Other interesting features? What is known about its sequence?


Cell Structure, Metabolism and Life Cycle

Interesting features of cell structure; how it gains energy; what important molecules it produces.


Ecology and Pathogenesis

Habitat; symbiosis; biogeochemical significance; contributions to environment.
If relevant, how does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.

References

[Sample reference] Takai, K., Sugai, A., Itoh, T., and Horikoshi, K. "Palaeococcus ferrophilus gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". International Journal of Systematic and Evolutionary Microbiology. 2000. Volume 50. p. 489-500.


http://aem.asm.org/cgi/reprint/65/8/3674

Author

Page authored by Brad J. Wardynski, Michael Wandersee, and Erika White, students of Prof. Jay Lennon at Michigan State University.


Pseudomonas chlororaphis

P. chlororaphis group

P. aurantiaca P. aureofaciens P. chlororaphis P. fragi P. lundensis P. taetrolens