Difference between revisions of "Tobamovirus"

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==Genome Structure==
 
==Genome Structure==
  
The genome of Tobamovirus is usually monomeric or polymeric, not segmented, and contains a single molecule of linear, positive-sense, single-stranded RNA. Minor species of non-genomic nucleic acid may also be found in virions. The encapsidated nucleic acid is mainly of genomic origin but virions may also contain nucleic acid of host origin and subgenomic mRNA including host rRNA found in the short particles of some species. The genome is sequenced and the complete sequence is about 6450 nucleotides long. The genome has a base ratio of 23-24.32-25.8 % guanine; 24.6-27.92-29.8 % adenine; 18-19.02-20.6 % cytosine; 26.3-28.72-31.6 % uracil. The 5'-end of the genome has a methylated nucleotide cap and the cap sequence type is m7G5'ppp5 ('Gp). The 3'-terminus has a tRNA-like structure that accepts histidine. (source: [http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/index.htm ICTVdB Descriptions])
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The genome of Tobamovirus is usually monomeric or polymeric, not segmented, and contains a single molecule of linear, positive-sense, single-stranded RNA. Minor species of non-genomic nucleic acid may also be found in virions. The encapsidated nucleic acid is mainly of genomic origin but virions may also contain nucleic acid of host origin and subgenomic mRNA including host rRNA found in the short particles of some species. The genome is sequenced and the complete sequence is about 6450 nucleotides long. The genome has a base ratio of 23-24.32-25.8 % guanine; 24.6-27.92-29.8 % adenine; 18-19.02-20.6 % cytosine; and 26.3-28.72-31.6 % uracil. The 5'-end of the genome has a methylated nucleotide cap and the cap sequence type is m7G5'ppp5 ('Gp). The 3'-terminus has a tRNA-like structure that accepts histidine. (source: [http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/index.htm ICTVdB Descriptions])
  
 
==Virion Structure of a Tobamovirus==
 
==Virion Structure of a Tobamovirus==

Revision as of 19:20, 10 July 2006

EM of Tobacco Mosaic virus. From ICTVdb Picture Gallery, Courtesy Dr. RG Milne

Baltimore Classification

Higher order taxa

Viruses; ssRNA positive-strand viruses, no DNA stage; (no assigned family); Tobamovirus

Species

Tobacco mosaic virus, Cucumber green mottle mosaic virus, Frangipani mosaic virus, Turnip vein-clearing virus (examples)

Description and Significance

Genome Structure

The genome of Tobamovirus is usually monomeric or polymeric, not segmented, and contains a single molecule of linear, positive-sense, single-stranded RNA. Minor species of non-genomic nucleic acid may also be found in virions. The encapsidated nucleic acid is mainly of genomic origin but virions may also contain nucleic acid of host origin and subgenomic mRNA including host rRNA found in the short particles of some species. The genome is sequenced and the complete sequence is about 6450 nucleotides long. The genome has a base ratio of 23-24.32-25.8 % guanine; 24.6-27.92-29.8 % adenine; 18-19.02-20.6 % cytosine; and 26.3-28.72-31.6 % uracil. The 5'-end of the genome has a methylated nucleotide cap and the cap sequence type is m7G5'ppp5 ('Gp). The 3'-terminus has a tRNA-like structure that accepts histidine. (source: ICTVdB Descriptions)

Virion Structure of a Tobamovirus

The virions of tobamovirus consist of a non-enveloped capsid. The capsid is elongated with helical symmetry and is rod shaped and straight. It has a herring-bone pattern with a low percentage in population clear predominate lengths. The axial canal could be distinct with a diameter of 2-3.257-4 nm and the basic helix could be obvious or obscure. The pitch of the helix is 2.3-2.314-2.4 nm. (source: ICTVdB Descriptions)

Reproduction Cycle of a Tobamovirus in a Host Cell

Viral Ecology & Pathology

References

ICTVdB Descriptions