Mariprofundus ferrooxydans: Difference between revisions
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==Description and Significance== | ==Description and Significance== | ||
[[Image:m ferrooxydans.jpeg|thumb| | [[Image:m ferrooxydans.jpeg|thumb|310px|right|''M. ferrooxydans viewed by TEM.'']] | ||
<i>Mariprofundus ferrooxydans</i> is a marine iron-oxidizing bacteria and is the sole member of the Zetaproteobacteria class. <i>M. ferrooxydans</i> are a C-shaped, motile, gram negative bacteria which exude stalks for the excretion iron oxides. [1] | <i>Mariprofundus ferrooxydans</i> is a marine iron-oxidizing bacteria and is the sole member of the Zetaproteobacteria class. <i>M. ferrooxydans</i> are a C-shaped, motile, gram negative bacteria which exude stalks for the excretion iron oxides. [1] | ||
<i>M. ferooxydans</i> was first discovered at the hydrothermal vents at Loihi Seamount, Hawaii. | <i>M. ferooxydans</i> was first discovered at the hydrothermal vents at Loihi Seamount, Hawaii. At that location, the temperature is low, iron is abundant, and microbial mats of iron oxides surround the seamount. [2] | ||
<i>M. ferrooxydans</i> obtains energy from oxidizing Fe(II) and obtains carbon from CO2, designating this bacteria as a | <i>M. ferrooxydans</i> obtains energy from oxidizing Fe(II) and obtains carbon from CO2, designating this bacteria as a chemolithoautotroph. Growth has been observed at temperatures from 5° to 30°C, with 23°C being the optimal temperature, classifying this organism as a mesophile. This bacteria is neutrophilic with an optimal pH range of 6.2-6.5, though growth has been observed at a pH range of 5.5-7.2. [3] | ||
==Genome Structure== | ==Genome Structure== | ||
<i>M. ferrooxydans</i> has a single circular chromosome. <br> | |||
After the 16S rRNA gene analysis of <i>M. ferrooxydans</i> revealed that it is unlike any other class of proteobacteria, <i>Zetaproteobacteria</i> has been accepted as an additional class. | |||
Genomic data from [2] was collected using the <i>M. ferrooxydans</i> PV-1 strain, with a genome size of 2,867,087 bp and a G+C content of 54%. Within the PV-1 genome, 6 phage integrases along with 21 transposases were identified, thus lateral gene transfer is a potential mechanism for the organism's unique genome. [2.] | |||
==Cell Structure, Metabolism and Life Cycle== | ==Cell Structure, Metabolism and Life Cycle== | ||
<b>Cell Structure</b> | <b>Cell Structure</b> <br> | ||
During cell growth, <i>Mariprofundus ferrooxydans</i> forms stalks that are used for the excretion and extracellular storage of oxidized iron. Iron oxyhydroxides along with carboxyl-rich polysaccharides are the main components of the stalks and it is thought that these components are bound together upon excretion from the cell. The stalks may have a key role in cell survival by controlling mineral growth, thus preventing enclosure of the cell solid iron minerals. [1] | During cell growth, <i>Mariprofundus ferrooxydans</i> forms stalks that are used for the excretion and extracellular storage of oxidized iron. Iron oxyhydroxides along with carboxyl-rich polysaccharides are the main components of the stalks and it is thought that these components are bound together upon excretion from the cell. The stalks may have a key role in cell survival by controlling mineral growth, thus preventing enclosure of the cell solid iron minerals. [1] <br> | ||
<b>Metabolism</b> | <b>Metabolism</b> <br> | ||
<i>M. ferrooxydans</i> gains energy by oxidizing reduced iron (Fe(II)) in the presence of oxygen, resulting in the formation of iron oxides (rust). Reduced iron serves as the electron donor and can be oxidized from several compounds, including FeS, FeCO3, FeCl2, Fe(NH4)2(SO4)2, FeSO4, and Fe(0) [3]. | <i>M. ferrooxydans</i> gains energy by oxidizing reduced iron (Fe(II)) in the presence of oxygen, resulting in the formation of iron oxides (rust). Reduced iron serves as the electron donor and can be oxidized from several compounds, including FeS, FeCO3, FeCl2, Fe(NH4)2(SO4)2, FeSO4, and Fe(0) [3]. <br> | ||
<b>Life Cycle</b> | <b>Life Cycle</b> <br> | ||
This bacteria has two stages in its cell cycle and alternates between them. In one stage, the cells possess flagella and are highly motile until conditions allowing for iron oxidation are found. Once these conditions are located, the cells switch to the second stage that is considered to be the growth stage. In the growth stage, the cells shed their flagella and begin stalk formation. During cell division, the stalk is split into a Y | This bacteria has two stages in its cell cycle and alternates between them. In one stage, the cells possess flagella and are highly motile until conditions allowing for iron oxidation are found. Once these conditions are located, the cells switch to the second stage that is considered to be the growth stage. In the growth stage, the cells shed their flagella and begin stalk formation. During cell division, the stalk is split into a Y shape, in which the two cells are attached to opposing ends of the stalk. Finally, the stalk is divided into two pieces of equal lengths, allowing each cell to acquire half of the stalk. Growth of the stalk is continued until the conditions required for iron oxidation are no longer sustained. This unfavorable change results in the cells to shed their stalks and re-enter the motile stage, where the process starts over. [1,2] | ||
==Ecology and Pathogenesis== | ==Ecology and Pathogenesis== | ||
[[Image:Zetaproteobacteria_microbial_mat.jpeg|thumb|350px|left|''Iron oxide microbial mat, formed primarily by iron-oxidizing Zetaproteobacteria.'']] | |||
[[Image:Zetaproteobacteria_microbial_mat.jpeg|thumb|350px|left|''Iron oxide | |||
<b>Ecology</b> <br> | <b>Ecology</b> <br> | ||
The conditions that <i>M. ferrooxydans</i> requires for growth and iron oxidation are found in several oceanic habitats. One of these habitats is located near a hydrothermal vent, at a distance where the heated iron-rich vent fluids are dissipated into the sea water. | The conditions that <i>M. ferrooxydans</i> requires for growth and iron oxidation are found in several oceanic habitats. One of these habitats is located near a hydrothermal vent, at a distance where the heated iron-rich vent fluids are dissipated into the sea water. Here, iron oxidizing bacteria, such as <i>M. ferrooxydans</i>, form iron-oxide microbial mats on the sea floor. These microbial mats are covered with iron oxides (rust) excreted by the cells. [2] <br> | ||
<i>M. ferrooxydans</i> can also be found in habitats where Fe(II) leaching occurs from underwater volcanic rocks, which makes it possible for iron-oxidizing bacteria to form biofilms on the rocks. [3] <br> | |||
Ships, bridges, and other iron-rich foundations within marine environments can harbor iron-oxidizing bacteria, resulting in expedited rust formation. [4] <br> | Ships, bridges, and other iron-rich foundations within marine environments can harbor iron-oxidizing bacteria, resulting in expedited rust formation. [4] <br> | ||
Although this bacteria is an obligate iron oxidizer, it has been cultivated on the surface of electrodes in the absence of Fe(II), during which the cells divided successfully but did not excrete stalks. [4] | Although this bacteria is an obligate iron oxidizer, it has been cultivated on the surface of electrodes in the absence of Fe(II), during which the cells divided successfully but did not excrete stalks. [4] <br> | ||
<br> | |||
<b>Pathogenesis</b> <br> | |||
<i>Mariprofundus ferrooxydans</i> is a nonpathogenic species of bacteria. | |||
<br> | |||
==References== | ==References== | ||
Latest revision as of 22:55, 28 April 2013
Classification
Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus
Species
Mariprofundus ferrooxydans
|
NCBI: Taxonomy |
Description and Significance
Mariprofundus ferrooxydans is a marine iron-oxidizing bacteria and is the sole member of the Zetaproteobacteria class. M. ferrooxydans are a C-shaped, motile, gram negative bacteria which exude stalks for the excretion iron oxides. [1]
M. ferooxydans was first discovered at the hydrothermal vents at Loihi Seamount, Hawaii. At that location, the temperature is low, iron is abundant, and microbial mats of iron oxides surround the seamount. [2]
M. ferrooxydans obtains energy from oxidizing Fe(II) and obtains carbon from CO2, designating this bacteria as a chemolithoautotroph. Growth has been observed at temperatures from 5° to 30°C, with 23°C being the optimal temperature, classifying this organism as a mesophile. This bacteria is neutrophilic with an optimal pH range of 6.2-6.5, though growth has been observed at a pH range of 5.5-7.2. [3]
Genome Structure
M. ferrooxydans has a single circular chromosome.
After the 16S rRNA gene analysis of M. ferrooxydans revealed that it is unlike any other class of proteobacteria, Zetaproteobacteria has been accepted as an additional class.
Genomic data from [2] was collected using the M. ferrooxydans PV-1 strain, with a genome size of 2,867,087 bp and a G+C content of 54%. Within the PV-1 genome, 6 phage integrases along with 21 transposases were identified, thus lateral gene transfer is a potential mechanism for the organism's unique genome. [2.]
Cell Structure, Metabolism and Life Cycle
Cell Structure
During cell growth, Mariprofundus ferrooxydans forms stalks that are used for the excretion and extracellular storage of oxidized iron. Iron oxyhydroxides along with carboxyl-rich polysaccharides are the main components of the stalks and it is thought that these components are bound together upon excretion from the cell. The stalks may have a key role in cell survival by controlling mineral growth, thus preventing enclosure of the cell solid iron minerals. [1]
Metabolism
M. ferrooxydans gains energy by oxidizing reduced iron (Fe(II)) in the presence of oxygen, resulting in the formation of iron oxides (rust). Reduced iron serves as the electron donor and can be oxidized from several compounds, including FeS, FeCO3, FeCl2, Fe(NH4)2(SO4)2, FeSO4, and Fe(0) [3].
Life Cycle
This bacteria has two stages in its cell cycle and alternates between them. In one stage, the cells possess flagella and are highly motile until conditions allowing for iron oxidation are found. Once these conditions are located, the cells switch to the second stage that is considered to be the growth stage. In the growth stage, the cells shed their flagella and begin stalk formation. During cell division, the stalk is split into a Y shape, in which the two cells are attached to opposing ends of the stalk. Finally, the stalk is divided into two pieces of equal lengths, allowing each cell to acquire half of the stalk. Growth of the stalk is continued until the conditions required for iron oxidation are no longer sustained. This unfavorable change results in the cells to shed their stalks and re-enter the motile stage, where the process starts over. [1,2]
Ecology and Pathogenesis
Ecology
The conditions that M. ferrooxydans requires for growth and iron oxidation are found in several oceanic habitats. One of these habitats is located near a hydrothermal vent, at a distance where the heated iron-rich vent fluids are dissipated into the sea water. Here, iron oxidizing bacteria, such as M. ferrooxydans, form iron-oxide microbial mats on the sea floor. These microbial mats are covered with iron oxides (rust) excreted by the cells. [2]
M. ferrooxydans can also be found in habitats where Fe(II) leaching occurs from underwater volcanic rocks, which makes it possible for iron-oxidizing bacteria to form biofilms on the rocks. [3]
Ships, bridges, and other iron-rich foundations within marine environments can harbor iron-oxidizing bacteria, resulting in expedited rust formation. [4]
Although this bacteria is an obligate iron oxidizer, it has been cultivated on the surface of electrodes in the absence of Fe(II), during which the cells divided successfully but did not excrete stalks. [4]
Pathogenesis
Mariprofundus ferrooxydans is a nonpathogenic species of bacteria.
References
[1] Chan, C. S., S. C. Fakra, D. Emerson, E.J. Fleming, and K.J. Edwards. "Lithotrophic iron-oxidizing bacteria produce organic stalks to control iron mineral growth: implications for biosignature formation". ISME Journal (2011) 5, p. 717-727.
[2] Singer, E., D. Emerson, EA Webb, RA Barco, JG Kuenen, et al. (2011). "Mariprofundus ferrooxydans PV-1 the First Genome of a Marine Fe(II) Oxidizing Zetaproteobacterium". PLoS ONE 6(9): e25386. doi:10.1371/journal.pone.0025386.
[3] Emerson D, Rentz JA, Lilburn TG, Davis RE, Aldrich H, et al. (2007). "A Novel Lineage of Proteobacteria Involved in Formation of Marine Fe-Oxidizing Microbial Mat Communities". PLoS ONE 2(8): e667. doi:10.1371/journal.pone.0000667.
[4] Summers, Z.M., J.A. Gralnick, D.R. Bond. (2013). "Cultivation of an Obligate Fe(II)-Oxidizing Lithoautotrophic Bacterium Using Electrodes". mBio 4(1):e00420-12. doi: 10.1128/mBio.00420-12.
Author
Page authored by Angela DeTomaso, student of Prof. Jay Lennon at Michigan State University.
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