Rice tungro bacilliform virus: Difference between revisions
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Molecular biology | Molecular biology | ||
VIRION | VIRION | ||
Non enveloped, bacilliform particles. | |||
GENOME | |||
Circular double stranded DNA of about 8000 base pairs with discontinuities in both strands: one in the transcribed strand and one to three in the non-transcribed strand. | |||
Revision as of 18:20, 17 April 2009
Classification
Viruses; Pararetro-transcribing viruses; Caulimoviridae; Tungrovirus; Rice tungro bacilliform NCBI link to find]
Species
Rice tungro bacilliform virus
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NCBI: Taxonomy |
Genus species
Description and Significance
Describe the appearance, habitat, etc. of the organism, and why you think it is important.
The virion consists of a capsid the is not enveloped. It is elongated and exhibits icosahedral symmetry. The capsid is bacilliform. The capsid shells of virions are composed of multiple layers. With a length of 110-400 nm and a width of 30-35 nm.
Rice tungro disease, the most important viral disease of rice, is widespread in South and Southeast Asia and is believed to be responsible for annual losses nearing 109 US dollars worldwide (Herdt 1991).
Rice tungro is a viral disease seriously affecting rice production in South and Southeast Asia. Tungro is caused by the simultaneous infection in rice of Rice tungro bacilliform virus (RTBV), a double-stranded DNA virus and Rice tungro spherical virus (RTSV), a single-stranded RNA virus.
RTBV and RTSV, also known as the ‘‘Tungro virus complex’’, are transmitted exclusively by the Green leafhopper, GLH, Nephotettix virescens
Tungrovirus Molecular biology VIRION
Non enveloped, bacilliform particles.
GENOME
Circular double stranded DNA of about 8000 base pairs with discontinuities in both strands: one in the transcribed strand and one to three in the non-transcribed strand.
Non enveloped, bacilliform particles.
GENOME
Circular double stranded DNA of about 8000 base pairs with discontinuities in both strands: one in the transcribed strand and one to three in the non-transcribed strand.
Genome Structure
Describe the size and content of the genome. How many chromosomes? Circular or linear? Other interesting features? What is known about its sequence?
Cell Structure, Metabolism and Life Cycle
Interesting features of cell structure; how it gains energy; what important molecules it produces.
retroviruses have an RNA genome whereas pararetroviruses have a DNA genome; and, a proviral form of retroviruses is integrated into the host chromosome whereas the DNA of pararetroviruses accumulates within the nucleus as multiple copies of a circular chromosome
RTBV genome is a double stranded DNA of 8.0 kbp with two site-specific discontinuities resulting from replication by reverse transcriptase [3,16]. The RTBV genome has four open reading frames (ORF)
Rice tungro bacilliform virus (RTBV) replicates only in phloem cells in infected rice plants and its promoter drives strong phloem-specific reporter gene expression in transgenic rice plants. (http://images.google.com/imgres?imgurl=http://www.nature.com/emboj/journal/v16/n17/thumbs/7590500f5.jpg&imgrefurl=http://www.nature.com/emboj/journal/v16/n17/full/7590500a.html&usg=__8B6jGU34wMMqMKWlhViJo4xevbc=&h=193&w=150&sz=8&hl=en&start=14&tbnid=W6es5t8H8UfYAM:&tbnh=103&tbnw=80&prev=/images%3Fq%3DRice%2Btungro%2Bbacilliform%2Bvirus%26gbv%3D2%26hl%3Den%26safe%3Doff%26sa%)
Ecology and Pathogenesis
Habitat; symbiosis; biogeochemical significance; contributions to environment.
If relevant, how does this organism cause disease? Human, animal, plant hosts? Virulence factors, as well as patient symptoms.
References
Yanhai Yin2, Qun Zhu3, Shunhong Dai1, Chris Lamb3 and Roger N. Beachy1 "RF2a, a bZIP transcriptional activator of the phloem-specific rice tungro bacilliform virus promoter, functions in vascular development "
Himani Tyagi Æ Shanmugam Rajasubramaniam Æ Manchikatla Venkat Rajam Æ.Indranil Dasgupta RNA-interference in rice against Rice tungro bacilliform virus results in its decreased accumulation in inoculated rice plants
Author
Page authored by _____, student of Prof. Jay Lennon at Michigan State University.
