Forest Soils: Difference between revisions

From MicrobeWiki, the student-edited microbiology resource
(Created page with "_NOTOC__ <center><h1>Welcome to MicrobeWiki</h1></center> <center><h2> Study Microbes * Microbial Biorealm * Viral Biorealm * Microbial Mythology</h2></...")
 
No edit summary
Line 1: Line 1:
_NOTOC__
{{Uncurated}}
<center><h1>Welcome to MicrobeWiki</h1></center>
==Introduction==
[[Image:PHIL_1181_lores.jpg|thumb|300px|right|Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the CDC.]]
<br>At right is a sample image insertion.  It works for any image uploaded anywhere to MicrobeWiki.  The insertion code consists of:
<br><b>Double brackets:</b> [[
<br><b>Filename:</b> PHIL_1181_lores.jpg
<br><b>Thumbnail status:</b> |thumb|
<br><b>Pixel size:</b> |300px|
<br><b>Placement on page:</b> |right|
<br><b>Legend/credit:</b> Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the CDC.
<br><b>Closed double brackets:</b> ]]
<br><br>Other examples:
<br><b>Bold</b>
<br><i>Italic</i>
<br><b>Subscript:</b> H<sub>2</sub>O
<br><b>Superscript:</b> Fe<sup>3+</sup>


<center><h2> [[Study Microbes]]  *  [[Microbial Biorealm]]  *  [[Viral Biorealm]]  *  [[Microbial Mythology]]</h2></center>
This template gives you a general idea of the layout of your page. You are not completely restricted to this format, so feel free to try out different things. I'll give you feedback as you work on your pages. Make sure to copy the "code" of this page to your own page before editing.
-Prof Kent


'''MicrobeWiki''' is a free wiki resource on microbes and microbiology, authored by students at many colleges and universities. '''[[Curated Pages|Curated pages]]''' such as those linked to the '''[[Taxonomy Index]]''' are reviewed and updated by '''[mailto:microbewikiadmin@kenyon.edu| microbiologists]''' at [http://www.kenyon.edu '''Kenyon College'''].  '''[[Student Pages|Student pages]]''' authored independently, or for coursework, are not monitored further. Interested readers are encouraged to add information, after registering a [[Contact MicrobeWiki|'''free account''']]. <br><br>
In the introduction, briefly describe the habitat that is the topic of this page. Introduce the habitat, its ecological significance, and the importance of microorganisms in this environment. (What processes do they carry out? What functions do they perform?)
'''[[Study Microbes]]''' is a new section of study questions and recommended species for students to learn, based on the textbook [http://biology.kenyon.edu/slonc/Micro/SFMB2_brochure.pdf Microbiology: An Evolving Science] by Joan Slonczewski and John Foster (W. W. Norton & Co.)<br> <br>
'''Educators:''' You may assign MicrobeWiki page creation and editing as projects for your students.  We create a [[List of class template pages | '''template page''']] for your assignment, which you may edit to meet your needs.  See for example the pages created by the following classes:


{{class list}}
==Physical environment==
Describe the physical and chemical characteristics of the environment, using as many sections/subsections as you require. If it is appropriate, you can divide the physical and chemical attributes of the environment into separate sections. Look at other topics available in MicrobeWiki. Which involve processes similar to yours? Create links where relevant.


Your students receive individual passwords.  Assessment and grading are up to you; after your class is over, we review pages for our standards.  Students of all levels, from first-year to graduate students, have contributed pages to our site.<br><br>
===Subsection 1===
'''MicrobeWiki''' includes these [[Curated Pages|curated pages]]:<br>
====Subsection 1a====
'''[[Microbial Biorealm]]''': encylopedia of bacteria, archaea and eukaryotic microbes.  See also [[Taxonomy Index]].<br>
====Subsection 1b====
'''[[Viral Biorealm]]''': encyclopedia of viruses of animals and plants, and bacteriophages.  See also [[Taxonomy Index]].<br>
===Subsection 2===
'''[[Microbial Mythology]]''': common misconceptions and controversies in microbiology.<br>


=== Managing Editor ===
[http://biology.kenyon.edu/HHMI/Barich.pdf '''Daniel Barich '05''']


=== Kenyon Student Editors ===
==Microbial communities==
Kristina Buschur, '11, Ryo Tashiro '09, Molly Schlemmer '08, Shrochis Karki '09, Drew Taber<sup>3</sup>, Allison Whipple '06, Zeva Levine<sup>1</sup>, Laura Damon-Moore<sup>1</sup>, Ariel Kahrl<sup>2</sup>, Hannah Sacks '08, Michael Stulberg '05, Casey M. Smith '06, and Shana Scogin '07
What kind of microbes do we typically find in this environment? Or associated with important processes in this environment? Describe key groups of microbes that we find in this environment, and any special adaptations they may have evolved to survive in this environment.
List examples of specific microbes that represent key groups or are associated with important processes found in this environment. Link to other MicrobeWiki pages where possible.


Advisor: [mailto:slonczewski@kenyon.edu Joan Slonczewski], [http://biology.kenyon.edu Biology Dept], [http://www.kenyon.edu Kenyon College]<br />
Are there important biological interactions that are important in this environment? Do these interactions influence microbial populations and their activities? How do these interactions influence other organisms? Describe biological interactions that might take place in this environment, using as many sections/subsections as you require. Look at other topics available in MicrobeWiki. Create links where relevant.  
Guest editors from <sup>1</sup>[http://www.beloit.edu// Beloit], <sup>2</sup>[http://www.oberlin.edu/ Oberlin], and <sup>3</sup>[http://www.cuc.edu Columbia Union College].<br />
Funded by [http://biology.kenyon.edu/HHMI/ HHMI] awards to Kenyon College, 2000, 2004.


'''Copyright notice.''' Readers may view, browse, and/or download material for
===Subsection 1===
noncommercial personal purposes. Please credit our site for use. Materials on our site obtained with permission from other sources require permission from those sources<br> for further reproduction.
====Subsection 1a====
====Subsection 1b====
===Subsection 2===


'''Disclaimer.''' Information on this site is provided solely for educational purposes. Medical questions should be referred to a physician.
==Microbial processes==
[[Category:System pages]]
What microbial processes define this environment? Describe microbial processes that are important in this habitat, adding sections/subsections as needed. Look at other topics in MicrobeWiki. Are some of these processes already described? Create links where relevant.
 
===Subsection 1===
====Subsection 1a====
====Subsection 1b====
===Subsection 2===
 
==Current Research==
 
Enter summaries of recent research here--at least three required
 
==References==
 
[Sample reference] [http://ijs.sgmjournals.org/cgi/reprint/50/2/489 Takai, K., Sugai, A., Itoh, T., and Horikoshi, K. "''Palaeococcus ferrophilus'' gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". ''International Journal of Systematic and Evolutionary Microbiology''. 2000. Volume 50. p. 489-500.]
 
Edited by <your name>, a student of Angela Kent at the University of Illinois at Urbana-Champaign.
 
<!-- Do not edit or remove this line -->[[Category:Pages edited by students of Angela Kent at the University of Illinois at Urbana-Champaign]]

Revision as of 20:19, 6 April 2013

This student page has not been curated.

Introduction

Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the CDC.


At right is a sample image insertion. It works for any image uploaded anywhere to MicrobeWiki. The insertion code consists of:
Double brackets: [[
Filename: PHIL_1181_lores.jpg
Thumbnail status: |thumb|
Pixel size: |300px|
Placement on page: |right|
Legend/credit: Electron micrograph of the Ebola Zaire virus. This was the first photo ever taken of the virus, on 10/13/1976. By Dr. F.A. Murphy, now at U.C. Davis, then at the CDC.
Closed double brackets: ]]

Other examples:
Bold
Italic
Subscript: H2O
Superscript: Fe3+

This template gives you a general idea of the layout of your page. You are not completely restricted to this format, so feel free to try out different things. I'll give you feedback as you work on your pages. Make sure to copy the "code" of this page to your own page before editing. -Prof Kent

In the introduction, briefly describe the habitat that is the topic of this page. Introduce the habitat, its ecological significance, and the importance of microorganisms in this environment. (What processes do they carry out? What functions do they perform?)

Physical environment

Describe the physical and chemical characteristics of the environment, using as many sections/subsections as you require. If it is appropriate, you can divide the physical and chemical attributes of the environment into separate sections. Look at other topics available in MicrobeWiki. Which involve processes similar to yours? Create links where relevant.

Subsection 1

Subsection 1a

Subsection 1b

Subsection 2

Microbial communities

What kind of microbes do we typically find in this environment? Or associated with important processes in this environment? Describe key groups of microbes that we find in this environment, and any special adaptations they may have evolved to survive in this environment. List examples of specific microbes that represent key groups or are associated with important processes found in this environment. Link to other MicrobeWiki pages where possible.

Are there important biological interactions that are important in this environment? Do these interactions influence microbial populations and their activities? How do these interactions influence other organisms? Describe biological interactions that might take place in this environment, using as many sections/subsections as you require. Look at other topics available in MicrobeWiki. Create links where relevant.

Subsection 1

Subsection 1a

Subsection 1b

Subsection 2

Microbial processes

What microbial processes define this environment? Describe microbial processes that are important in this habitat, adding sections/subsections as needed. Look at other topics in MicrobeWiki. Are some of these processes already described? Create links where relevant.

Subsection 1

Subsection 1a

Subsection 1b

Subsection 2

Current Research

Enter summaries of recent research here--at least three required

References

[Sample reference] Takai, K., Sugai, A., Itoh, T., and Horikoshi, K. "Palaeococcus ferrophilus gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". International Journal of Systematic and Evolutionary Microbiology. 2000. Volume 50. p. 489-500.

Edited by <your name>, a student of Angela Kent at the University of Illinois at Urbana-Champaign.