Idiomarina loihiensis: Difference between revisions
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[http://www.blackwell-synergy.com/doi/abs/10.1111/j.1574-6968.2007.00714.x Collyn, F., Roten, C., and Guy, L. "Solving ambiguities in contig assembly of ''Idiomarina loihiensis'' L2TR chromosome by ''in silico'' analyses". ''FEMS Microbiology Letters''. 2007. Volume 271. p. 187-192.] | [http://www.blackwell-synergy.com/doi/abs/10.1111/j.1574-6968.2007.00714.x Collyn, F., Roten, C., and Guy, L. "Solving ambiguities in contig assembly of ''Idiomarina loihiensis'' L2TR chromosome by ''in silico'' analyses". ''FEMS Microbiology Letters''. 2007. Volume 271. p. 187-192.] | ||
[http://ijs.sgmjournals.org/cgi/content/full/53/6/1873 Donachie, S., Hou, S., Gregory, T., et al. "''Idiomarina loihiensis'' sp. nov., a halophilic ''γ-proteobacterium'' from the Lo'ihi submarine volcano, Hawai'i". ''International Journal of Systematic and Evolutionary Microbiology''. Volume 53. p. 1873-1879.] | |||
[http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=15596722 Hou, S., Saw, J., Lee,K., et al. "Genome sequence of the deep-sea γ-proteobacterium ''Idiomarina loihiensis'' reveals amino acid fermentation as a source of carbon and energy". ''Proceedings of the National Academy of Sciences of the United States of America''. 2004. Volume 101.] | |||
[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WK7-4GSJTWC-1&_user=10&_coverDate=09%2F23%2F2005&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=90001ffe97ca7a6310630c67b621d3cd Shibata, S., Alam, M., and Aizawa, S. "Flagellar Filaments of the Deep-Sea Bacteria ''Idiomarina loihiensis'' Belong to a Family Different from those of ''Salmonella tymphimurium''". ''Journal of Molecular Biology''. 2005. Volume 352. p 510-516.] | |||
[http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1382215&blobtype=pdf Xu, Y., Glandsdorff, N., and Labedan, B. "Bioinformatic analysis of an unusual gene-enzyme relationship in the arginine biosynthetic pathway among marine gamma proteobacteria: implications concerning the formation of N-acetylated intermediates in prokaryotes". ''BMC Genomics''. 2006. Volume 7.] | [http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1382215&blobtype=pdf Xu, Y., Glandsdorff, N., and Labedan, B. "Bioinformatic analysis of an unusual gene-enzyme relationship in the arginine biosynthetic pathway among marine gamma proteobacteria: implications concerning the formation of N-acetylated intermediates in prokaryotes". ''BMC Genomics''. 2006. Volume 7.] | ||
Edited by student of [mailto:ralarsen@ucsd.edu Rachel Larsen] | Edited by student of [mailto:ralarsen@ucsd.edu Rachel Larsen] |
Revision as of 00:33, 29 August 2007
A Microbial Biorealm page on the genus Idiomarina loihiensis
Classification
Higher order taxa
Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina
Species
NCBI: Taxonomy |
Idiomarina loihiensis
Description and significance
Describe the appearance, habitat, etc. of the organism, and why it is important enough to have its genome sequenced. Describe how and where it was isolated. Include a picture or two (with sources) if you can find them.
Genome structure
Describe the size and content of the genome. How many chromosomes? Circular or linear? Other interesting features? What is known about its sequence? Does it have any plasmids? Are they important to the organism's lifestyle?
Cell structure and metabolism
Describe any interesting features and/or cell structures; how it gains energy; what important molecules it produces.
Ecology
Describe any interactions with other organisms (included eukaryotes), contributions to the environment, effect on environment, etc.
Application to Biotechnology
Does this organism produce any useful compounds or enzymes? What are they and how are they used?
Current Research
Enter summaries of the most recent research here--at least three required
References
Edited by student of Rachel Larsen