UCSD Bacterial Niches: Difference between revisions

From MicrobeWiki, the student-edited microbiology resource
No edit summary
No edit summary
Line 7: Line 7:




<table border="0" cellpadding="2" cellspacing="2" width="100%">
'''''[[Dental Water Line]]'''''<br>
<tr valign="top">
By Jane Choi, Bo R. Heo, Jinsoo Lee, Soh Yun Lee, and So Young Moon
<td>


'''''[[Deep Rock Sediment]]'''''<br>
By Joe Raleigh


'''''[[Acinetobacter baumannii]]'''''<br>
'''''[[Human Hands and Fingernails]]'''''<br>
By Jennifer Wang
By Chao-Lin Chen, Demosthenes Morales, Huynh Nga Vo


'''''[[Aeropyrum pernix]]'''''<br>
'''''[[Komodo Dragon Mouth]]'''''<br>
By Daniel Pak
By  


'''''[[Agrobacterium tumefaciens]]'''''<br>
'''''[[Large Intestine]]'''''<br>
By Allan Wu
By  


'''''[[Anabaena variabilis]]'''''<br>
'''''[[Marine Sponge:  Sponge-Bacteria Association]]'''''
By Phuoc Nam Nguyen
By Thomas Kim, Woo Lee, Jessica Na, Francis Wong, Sungjun Yoon


'''''[[Anaeromyxobacter dehalogenans]]'''''<br>
'''''[[Mouth]]'''''<br>
By Lori Nacario
By Mason Chen, Diana Kirchmann, Alvin Kwong, Lydi Martinez, Mei Ng, Gabriel Tran, Kristen Watanabe, Kathryn Yee


'''''[[Anaplasma marginale]]'''''<br>
'''''[[Newborn baby digestive tract]]'''''<br>
By Patricia Shih
By Coco Chin, Jeremy Dayrit, Hanaah Fannin, Angela Ho, Chon Ieng, Min-jeong Suh


'''''[[Anaplasma phagocytophilum]]'''''<br>
'''''[[Salt Lake]]'''''<br>
By Jerry Yu
By Alan Wong, Gary Porter, Kate Graham, Nicolle Ma


'''''[[Aquifex aeolicus]]'''''<br>
'''''[[Sargasso Sea]]'''''<br>
By Diana Genetti
By Sherry Pablo, Hugo Frazao, Patricia Tu, Asa Gardner, Cam Nguyen, HsiaoTing Wang


'''''[[Archaeoglobus fulgidus]]'''''<br>
'''''[[Sewage Water Treatment Vat]]'''''<br>
By Mike Sha
By Vache Sharyan and Artak Harutyunyan


'''''[[Bacillus anthracis]]'', causes anthrax'''''
'''''[[Skin]]'''''<br>
'''
By Patrick A. McGhee, Susan Lin, Eric Pham, Pavithra Ramasubramanian, Deeba Pourmand, Wei Chien, Leo Borjon, David Juma, Cynthia Wong
By Grace Ucar


'''''[[Bacillus clausii]]'''''<br>
'''''[[Small Intestine]]'''''<br>
By Ankur Pate
By Ellis Chiu, Janet Kwok, Kevin Lee, Susan Lee, Martin Tang, Adnan Vahora


'''''[[Bacillus licheniformis]]'''''<br>
'''''[[Termite gut]]'''''<br>
By Thu Mai
By Kevin Cho, Seyon Kim, Jee Shin


'''''[[Bacillus subtilis]]'''''<br>
'''''[[Vagina]]'''''<br>
By Margo Ucar
By Jason Wong, Yumi Honda, Elieth Martinez, Raymond Villar, Eunice Kim, Whitney La
 
'''''[[Bacillus thuringiensis]]'''''<br>
By Ernest Hsu
 
'''''[[Bacteroides thetaiotaomicron]]'''''<br>
By Bashar Mirza
 
'''''[[Bartonella quintana]]'''''<br>
By Neena Patel
 
'''''[[Bifidobacterium adolescentis]]'''''<br>
By Jennifer York
 
'''''[[Bifidobacterium longum]]'''''<br>
By Desiree Skelton
 
'''''[[Bordetella bronchiseptica]]'''''<br>
By Kim Phan
 
'''''[[Bordetella pertussis]]'''''<br>
By Linda Wang
 
'''''[[Borrelia afzelii]]'''''<br>
By Hani Mudawar
 
'''''[[Borrelia burgdorferi]]'''''<br>
By Dan Holligan
 
'''''[[Borrelia garinii]]'', causes Lyme disease.'''<br>
By Kimberly Tong
 
'''''[[Bradyrhizobium japonicum]]'''''<br>
By Erik Low
 
'''''[[Brucella abortus]]'''''<br>
By Elizabeth Costa
 
'''''[[Brucella melitensis]]'''''<br>
By Kathleen Wong
 
'''''[[Brucella suis]]'''''<br>
By Zhixuan Zhao
 
'''''[[Buchnera aphidicola]]'''''<br>
By Kyu Hahn
 
'''''[[Burkholderia mallei]]'''''<br>
By Winnie Liu
 
'''''[[Burkholderia cepacia]]'''''<br>
By Heather McClendon
 
'''''[[Burkholderia pseudomallei]]'''''<br>
By Jim O
 
'''''[[Campylobacter fetus]]'''''<br>
By Sharon Porath
 
'''''[[Campylobacter Jejuni]]'''''<br>
By LiJie Shi
 
'''''[[Candidatus ruthia magnifica]]'''''<br>
By Albert Noniyev
 
'''''[[Carboxydothermus hydrogenoformans]]'''''<br>
By David Chung
 
'''''[[Chlamydia muridarum]]'''''<br>
By Marina Christou
 
'''''[[Chlamydia trachomatis]]'''''<br>
By Christina Bach
 
'''''[[Chlamydophila abortus]]'''''<br>
By Kylee Lim
 
'''''[[Chlamydophila caviae]]'''''<br>
By Katherine Kaushal
 
'''''[[Chlamydophila felis]]'''''<br>
By Roseanna Iverson
 
'''''[[Chlamydophila pneumoniae]]'', causes pneumonia.'''<br>
By Issac Cho
 
'''''[[Chlorobium chlorochromatii]]'''''<br>
By Tae Kim
 
'''''[[Chlorobium tepidum]]'''''<br>
By Brian Chung
 
'''''[[Chromobacterium violaceum]]'''''<br>
By Sennett Han
 
'''''[[Chromohalobacter Salexigens]]'''''<br>
By Chris Wittrock
 
'''''[[Clostridium acetobutylicum]]'''''<br>
By Mark Hower
 
'''''[[Clostridium botulinum]]'', causes botulism'''<br>
By Brannon Peralta
 
'''''[[Clostridium difficile]]'''''<br>
By Shaheen Najafi
 
'''''[[Clostridium novyi]]'''''<br>
By Caroline Wesemuller
 
'''''[[Clostridium thermocellum]]'''''<br>
By Kenny Lam
 
'''''[[Colwellia psychrerythraea]]'''''<br>
By Jaclyn Gaede
 
'''''[[Corynebacterium diphtheriae]]'', causes diptheria.'''<br>
By Rachael Spradley
 
'''''[[Corynebacterium glutamicum]]'''''<br>
By Giang Nguyen
 
'''''[[Corynebacterium jeikeium]]'''''<br>
By Michelle Ku
 
'''''[[Coxiella burnetti]]'''''<br>
By Lisa Leung
 
'''''[[Dechloromonas aromatica]]'''''<br>
By Akira Noda
 
'''''[[Dehalococcoides ethenogenes]]'''''<br>
By Tim Hou
 
'''''[[Deinococcus geothermalis]]'''''<br>
By John-Minh Q. Nguyen
 
'''''[[Deinococcus radiodurans]]'''''<br>
By Edwin Cook
 
'''''[[Ehrlichia canis]]'''''<br>
By Sue Kim
 
'''''[[Ehrlichia chaffeensis]]'''''<br>
By Armen Sarkisian
 
'''''[[Enterococcus faecalis]]'''''<br>
By Richard A. Martinez
 
'''''[[Enterococcus faecium]]'''''<br>
By Morgan Feori
 
'''''[[Erwinia carotovora]]'''''<br>
By Melody Chin
 
'''''[[Escherichia coli]]'''''<br>
By Li Chueh
 
'''''[[Francisella tularensis]]'''''<br>
By Dan Su
 
'''''[[Frankia alni]]'''''<br>
By Mandana Farahani
 
'''''[[Fusobacterium nucleatum]]'''''<br>
By Jason Homan
</td>
<td>
'''''[[Geobacillus kaustophilus]]'''''<br>
By Tony Le
 
'''''[[Geobacter metallireducens]]'''''<br>
By Christine Tang
 
'''''[[Geobacter sulfurreducens]]'''''<br>
By Frank Nguyen
 
'''''[[Gloeobacter Violaceus]]'''''<br>
By Tracy Washington
 
'''''[[Gluconobacter oxydans]]'''''<br>
By Lynn Cheung
 
'''''[[Gramella forsetii]]'''''<br>
By Jake Chuang
 
'''''[[Granulibacter bethesdensis]]'''''<br>
By Jinhua Piao
 
'''''[[Group a Streptococcus]]'''''<br>
By Braeden Carrico
 
'''''[[Haemophilus ducreyi]]'''''<br>
By Anthony Nguyen
 
'''''[[Haemophilus somnus]]'''''<br>
By Christina Tam
 
'''''[[Haloarcula Marismortui]]'''''<br>
By Lauren Joe
 
'''''[[Halobacterium sp. NRC-1]]'''''<br>
By Sung-Hee Hong
 
'''''[[Halorhodospira halophila]]'''''<br>
By Kent Lee
 
'''''[[Haloquadratum walsbyi]]'''''<br>
By Heidi T. Tuason
 
'''''[[Helicobacter hepaticus]]'''''<br>
By Arpan Patel
 
'''''[[Helicobacter pylori]]'''''<br>
By Katherine Park
 
'''''[[Hyperthermus butylicus]]'''''
By Jeff Kwak
 
'''''[[Hyphomonas neptunium]]'''''<br>
By Sol Lee
 
'''''[[Jannaschia rubra]]'''''<br>
By Han-Mei Chen
 
'''''[[Lactobacillus acidophilus]]'''''<br>
By Jennifer B. Samore
 
'''''[[Lactobacillus jensenii]]'''''<br>
By Frances Cho
 
'''''[[Lactobacillus johnsonii]]'''''<br>
By Richard Sawaya
 
'''''[[Lactobacillus brevis]]'''''<br>
By Ekaterina Magonova
 
'''''[[Lactobacillus sakei]]'''''<br>
By Ana Pallera
 
'''''[[Lactococcus lactis]]'''''<br>
By Stanley Ho
 
'''''[[Lawsonia intracellularis]]'''''<br>
By Judy Chen
 
'''''[[Legionella pneumophila]]'''''<br>
By Stephanie Lin
 
'''''[[Leptospira borgpetersenii]]'''''<br>
By James Jung
 
'''''[[Listeria innocua]]'''''<br>
By Natalie Phan
 
'''''[[Listeria monocytogenes]]'''''<br>
By Jenny Hung
 
'''''[[Magnetospirillum magneticum]]'''''<br>
By Adam Wheeler
 
'''''[[Marinobacter aquaeolei]]'''''<br>
By Allan Ji
 
'''''[[Methanococcus maripaludis]]'''''<br>
By Allen De Leon
 
'''''[[Methanothermobacter thermautotrophicus]]'''''<br>
By Anthony Kim
 
'''''[[Methylobacillus flagellatus]]'''''<br>
By Landon Nguyen
 
'''''[[Methylococcus capsulatus]]'''''<br>
By Ting Yuan Feng
 
'''''[[Methanosaeta thermophila]]'''''<br>
By Breanna Pearce
 
'''''[[Methanosarcina acetivorans]]'''''<br>
By Paul Molina
 
'''''[[Methanosarcina barkeri]]'''''<br>
By Ian Kerman
 
'''''[[Methanosphaera stadtmanae]]'''''<br>
By Amy Tran
 
'''''[[Mycobacterium bovis]]'''''<br>
By Steven Lada
 
'''''[[Mycobacterium leprae]]'', causes leprosy.'''
By Kenton Collup
 
'''''[[Mycobacterium tuberculosis]]'', causes tuberculosis'''<br>
By Ying Liu
 
'''''[[Mycobacterium smegmatis]]'''''<br>
By Benjamin Yip
 
'''''[[Mycobacterium vanbaalenii]]'''''<br>
By Mignon Chu
 
'''''[[Mycoplasma capricolum]]'''''<br>
By Ray Ku
 
'''''[[Mycoplasma gallisepticum]]'''''<br>
By Tawny Issarapanichkit
 
'''''[[Mycoplasma genitalium]]'''''<br>
By Michael Kim
 
'''''[[Mycoplasma hyopneumoniae]]'''''<br>
By Jessica Lau
 
'''''[[Mycoplasma mobile]]'''''<br>
By Sharon Wong
 
'''''[[Mycoplasma mycoides]]'''''<br>
By Jacqueline Chang
 
'''''[[Mycoplasma penetrans]]'''''<br>
By Ling Tsay
 
'''''[[Mycoplasma pneumoniae]]'''''<br>
By Yelena Pasternak
 
'''''[[Mycoplasma pulmonis]]'''''<br>
By Grace Wanto
 
'''''[[Mycoplasma synoviae]]'''''<br>
By Robert Rishwain
 
'''''[[Natronomonas Pharaonis]]'''''<br>
By Sarah Kwan
 
'''''[[Neisseria meningitidis]]'''''<br>
By Steven Chou
 
'''''[[Nitrobacter hamburgensis]]'''''<br>
By Rashonda Butler
 
'''''[[Nitrobacter winogradskyi]]'''''<br>
By Marilyn Mendoz
 
'''''[[Nitrosococcus oceani]]'''''<br>
By Khai Quach
 
'''''[[Nitrosomonas europaea]]'''''<br>
By Junfeng Liu
 
'''''[[Nitrosomonas eutropha]]'''''<br>
By David Herrera
 
'''''[[Nocardia farcinica]]'''''<br>
By Julie Crownover
 
'''''[[Oceanobacillus iheyensis]]'''''<br>
By Gloria Slusher
 
'''''[[Paracoccus denitrificans]]'''''<br>
By Caleb Cheng
 
'''''[[Pediococcus pentosaceus]]'''''<br>
By Ezra Yang
 
'''''[[Pasteurella multocida]]'''''<br>
By Christina Fong
 
'''''[[Pelobacter carbinolicus]]'''''<br>
By Jennifer Chang
 
'''''[[Photobacterium profundum]]'''''<br>
By Karen Lai
 
'''''[[Porphyromonas gingivalis]]'''''<br>
By Siddharth Krishnamurthy
 
'''''[[Propionibacterium acnes]]'''''<br>
By Christopher B. Smith
 
'''''[[Pseudoalteromonas atlantica]]'''''<br>
By Christina Shayevitz
 
'''''[[Pseudoalteromonas haloplanktis]]'''''<br>
By Kim Ngo
 
'''''[[Pseudomonas entomophila]]'''''<br>
By Jason Kim
 
'''''[[Pseudomonas fluorescens]]'''''<br>
By Danielle Kim
 
'''''[[Pseudomonas syringae]]'''''<br>
By David Sze
 
'''''[[Psychrobacter arcticus]]'''''<br>
By Thien-Nhut Dinh
 
'''''[[Psychrobacter cryohalolentis]]'''''<br>
By Vivianty Vivianty
 
'''''[[Psychromonas ingrahamii]]'''''<br>
By Ha Na Kim
 
'''''[[Pyrobaculum aerophilum]]'''''<br>
By Andrew Won
 
'''''[[Pyrococcus furiosus]]'''''<br>
By ChauNhien Nguyen
 
'''''[[Pyrococcus abyssi]]'''''<br>
By Stephine Chow
 
'''''[[Ralstonia eutropha]]'''''<br>
By Autumn Cook
 
'''''[[Ralstonia metallidurans]]'''''<br>
By Shu-Mei Yu
 
'''''[[Rhodoferax ferrireducens]]'''''<br>
By Thinzar Lwin
 
'''''[[Rickettsia conorii]]'''''<br>
By Cindy Zhang
 
'''''[[Rickettsia felis]]'''''<br>
By Kristen Whetsell
 
'''''[[Rickettsia prowazekii]]'''''<br>
By Matthew Noble
 
'''''[[Rickettsia typhi]]'''''<br>
By Omar Mendoza
 
'''''[[Salmonella typhimurium]]'''''<br>
By Janela Aitchison
 
'''''[[Shewanella baltica]]'''''<br>
By Tim Tang
 
'''''[[Shewanella denitrificans]]'''''<br>
By Karen Rossmassler
 
'''''[[Shewanella loihica]]'''''<br>
By Niru Sivakumar
 
'''''[[Shewanella oneidensis]]'''''<br>
By Gurpreet Dhillon
 
'''''[[Shigella boydii]]'''''<br>
By James Cunningham
 
'''''[[Shigella dysenteriae]]'', causes dysentery.'''<br>
By Julia Kao.
 
'''''[[Shigella flexneri]]'''''<br>
By Roman Fajardo
 
'''''[[Shigella sonnei]]'''''<br>
By Susan Cheng
 
'''''[[Silicibacter pomeroyi]]'''''<br>
By Lusine Khachatryan
 
'''''[[Staphylococcus aureus]]'''''<br>
By Christine Wu
 
'''''[[Staphylococcus haemolyticus]]'''''<br>
By Bao D. Truong
 
'''''[[Streptococcus agalactiae]]'''''<br>
By Ha Bean Kim
 
'''''[[Streptococcus pneumoniae]]'', causes pneumonia'''<br>
By Melody Morrison
 
'''''[[Streptococcus pyogenes]]'''''<br>
By Jingyi Wang
 
'''''[[Streptococcus salivarius]]'''''<br>
By Artin Meserkhani
 
'''''[[Streptococcus sanguinis]]'''''<br>
By Sung Oh
 
'''''[[Streptococcus thermophilus]]'''''<br>
By Dustin Park
 
'''''[[Streptomyces coelicolor]]'''''<br>
By Amy Stapp
 
'''''[[Synechococcus elongatus]]'''''<br>
By Peter Tang
 
'''''[[Syntrophomonas wolfei]]'''''<br>
By Joel Tourtellotte
 
'''''[[Thermobifida fusca]]'''''<br>
By Michael Zhang
 
'''''[[Thermococcus kodakarensis]]'''''<br>
By Jennifer Whitford
 
'''''[[Thermoplasma acidophilum]]'''''<br>
By Christina Won
 
'''''[[Treponema denticola]]'''''<br>
By Neena Patel
 
'''''[[Treponema pallidum]]'''''<br>
By Jasmin Eshragh
 
'''''[[Trichodesmium erythraeum]]'''''<br>
By Tara Tsukamoto
 
'''''[[Tropheryma whipplei]]'''''<br>
By Sophia Gevorkian
 
'''''[[Ureaplasma parvum]]'''''<br>
By Chris Katsura
 
'''''[[Vibrio cholerae]]''''', some of which cause cholera.<br>
By Sasha Gardner
 
'''''[[Vibrio harveyi]]'''''<br>
By Ryan Kendall.
 
'''''[[Vibrio fischeri]]'''''<br>
By Maxine Mathew.
 
'''''[[Vibrio parahaemolyticus]]'''''<br>
By Hau-Chen Lee
 
'''''[[Vibrio vulnificus]]'''''<br>
By Kristine Yambao
 
'''''[[Wigglesworthia glossinidia]]'''''<br>
By Carolyn Hruza
 
'''''[[Wolbachia pipientis]]'''''<br>
By Vincent Lee
 
'''''[[Wolinella succinogenes]]'''''<br>
By Desiree Navadeh
 
'''''[[Xylella fastidiosa]]'''''<br>
By Kathryn Thompson
 
'''''[[Yersinia enterocolitica]]'''''<br>
By Angela Chen
 
'''''[[Yersinia pestis]]'''''<br>
By Danny Dang
 
'''''[[Yersinia pseudotuberculosis]]'''''<br>
By Jennifer Jacobsen
 
'''''[[Zymomonas mobilis]]'''''<br>
By David Ly
</td>
</tr>
</table>
 
==Summer Quarter==
 
[[Image:Bimm120 ssII 1.JPG|center]]
 
Microbiology students of Rachel Larsen at the University of California at San Diego authored pages as term projects for their course, BIMM120 Bacteriology.<br>
 
 
 
<table border="0" cellpadding="2" cellspacing="2" width="100%">
<tr valign="top">
<td>
 
</td>
<td>
 
</td>
</tr>
</table>

Revision as of 15:59, 1 September 2008

University of California at San Diego -- BIMM120 Bacteriology student pages (second summer session)

Microbiology students of Rachel Larsen at the University of California at San Diego have authored the following pages as term projects for their course, BIMM120 Bacteriology.


Dental Water Line
By Jane Choi, Bo R. Heo, Jinsoo Lee, Soh Yun Lee, and So Young Moon

Deep Rock Sediment
By Joe Raleigh

Human Hands and Fingernails
By Chao-Lin Chen, Demosthenes Morales, Huynh Nga Vo

Komodo Dragon Mouth
By

Large Intestine
By

Marine Sponge: Sponge-Bacteria Association By Thomas Kim, Woo Lee, Jessica Na, Francis Wong, Sungjun Yoon

Mouth
By Mason Chen, Diana Kirchmann, Alvin Kwong, Lydi Martinez, Mei Ng, Gabriel Tran, Kristen Watanabe, Kathryn Yee

Newborn baby digestive tract
By Coco Chin, Jeremy Dayrit, Hanaah Fannin, Angela Ho, Chon Ieng, Min-jeong Suh

Salt Lake
By Alan Wong, Gary Porter, Kate Graham, Nicolle Ma

Sargasso Sea
By Sherry Pablo, Hugo Frazao, Patricia Tu, Asa Gardner, Cam Nguyen, HsiaoTing Wang

Sewage Water Treatment Vat
By Vache Sharyan and Artak Harutyunyan

Skin
By Patrick A. McGhee, Susan Lin, Eric Pham, Pavithra Ramasubramanian, Deeba Pourmand, Wei Chien, Leo Borjon, David Juma, Cynthia Wong

Small Intestine
By Ellis Chiu, Janet Kwok, Kevin Lee, Susan Lee, Martin Tang, Adnan Vahora

Termite gut
By Kevin Cho, Seyon Kim, Jee Shin

Vagina
By Jason Wong, Yumi Honda, Elieth Martinez, Raymond Villar, Eunice Kim, Whitney La