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From MicrobeWiki, the student-edited microbiology resource
  • [[Category:Short pages]] ...rabasalia, the microbes responsible for the breakdown of cellulose for use by the host termite. The study of ''C. microfasciculumque'' may lead to furth
    3 KB (382 words) - 14:40, 28 September 2015
  • ...rmastigotes that have over 50,000 flagella and are large enough to be seen by the naked eye. Genome is unsequenced as of April 2013. By sequencing its SSU rRNA, ''C. macrofasciculumque'' was found to be most sim
    3 KB (481 words) - 21:12, 29 April 2013
  • [[Category:Short pages]] ...lie Connolly, student of Kazem Kashefi and Edward Walker at Michigan State University.
    3 KB (391 words) - 14:33, 28 September 2015
  • ...acetica is an acetogenic bacteria that can autotrophically produce acetate by reducing carbon dioxide. Acetogenesis can be formed via the acetyl coenzyme ...lic temperatures and is anaerobic. The bacterium is a thermophile, growing at 58°C (140°F).
    3 KB (456 words) - 13:41, 29 April 2014
  • ...enebrarum 4.png|300px|thumb|right|Fig. 1. Cell morphology of strain RMAST by phase-contrast microscopy (a) and TEM (b and c). Electron micrographs were .... Cell walls are thick, approximately 21 nm, and bundles of fimbriae occur at the poles of the cell structure. Metabolically speaking, ''Methanothermobac
    4 KB (497 words) - 18:34, 21 April 2013
  • ...ile others can survive water contaminated by radon, which is a radioactive by-product of uranium mining. ...ut does not grow at 45°C. It can live at 2% NaCl, but one strain can live at 3% NaCl. The cell wall peptidoglycan is made up of DL- diaminopimelic acid
    4 KB (576 words) - 16:20, 20 April 2013
  • ....2µm in length and 0.5µm in diameter as shown in figure 1 [1]. It's motile by means of monotrichous flagellation. The number of chromosomes is unknown. A ...ine iron oxide, which is a dense material, attached to it. It gains energy by reducing Fe (III).
    3 KB (499 words) - 17:20, 23 April 2014
  • ...means thread-forming, sulfate reducer, mud-dweller, was described in 1983 by Widdel. [4, 5] ...ntous, multicellular, prokaryote bacterium. Cells are approximately 2.3-3 by 2-5 µm. The species is a strict anaerobe that is found in organic-rich, s
    4 KB (521 words) - 18:55, 25 August 2010
  • [[Category:Short pages]] [[Category:Pages edited by students of Dr.Ned Walker at Michigan State University]]
    5 KB (696 words) - 21:11, 14 December 2015
  • [[Category:Pages edited by students of Dr.Ned Walker at Michigan State University]] ...a beach in North Western Denmark, leaked and polluted the beach and a near by bird sanctuary.
    5 KB (782 words) - 14:42, 14 August 2013
  • ...the genome of Geoglobus ahangari. The DNA is known to be about 58.7% GC. By analysis of the 16S DNA, G. ahangari's two closest relatives are believed t Geoglobus ahangari can operate in an autotrophic sense by using hydrogen as an electron donor while reducing Fe(III) oxide. This pro
    5 KB (800 words) - 19:11, 15 July 2011
  • ...les, which are typically thermophiles, it is a mesophile, meaning it grows at an optimal temperature of 20 – 40 ºC (5). The name vannielii is Latin, ...rded in the gene bank. This protein is important for metabolism and growth by reducing harmful levels of selenium in the organism’s surroundings (6). P
    6 KB (767 words) - 18:59, 25 August 2010
  • ...growth, it was determined that ''C. maquilingensis'' grew best at 85°C and at a pH range of 3.7-4.2. ...pids and trace amounts of diether core lipids. These features are utilized by this microorganism to help it thrive within its very hot and very acidic en
    6 KB (903 words) - 23:11, 27 April 2012
  • [[Category:Short pages]] ...the end of the cell interacting with myosin. And the extension is caused by the actin reassembling itself back into its body. This is how the Amoeba pr
    6 KB (931 words) - 14:57, 16 April 2018
  • ...ge colonies are formed in 2-5 days (at room temperature RT). Growth occurs at a salinity range 0-0.5% NaCl (w/v). ...uggests that L. planktonicus may not be detrimental to existing ecosystems at all; in fact, it boosted species diversity in said studies. Although the ex
    6 KB (857 words) - 02:37, 22 April 2013
  • [[Image:m ferrooxydans.jpeg|thumb|310px|right|''M. ferrooxydans viewed by TEM.'']] ...was first discovered at the hydrothermal vents at Loihi Seamount, Hawaii. At that location, the temperature is low, iron is abundant, and microbial mats
    6 KB (944 words) - 22:55, 28 April 2013
  • ...ecies, and details of it were generated from research conducted at Cornell University in 2009. This research reported detailed information regarding the species' ...medium which is used for culturing anaerobic microorganisms. While growing at a range of pH values, a pH of 5.5 seemed to be the optimal pH for growth. T
    6 KB (932 words) - 19:38, 27 April 2012
  • ...ing which factors stimulate the production of nitrous oxide and dinitrogen by bacteria ingested into the earthworm gut.]] ...the process of denitrificaion, is among the six greenhouse gases included by the Kyoto protocol on climate change in 1997. Limiting it could help decrea
    6 KB (815 words) - 14:53, 30 April 2013
  • ''Thermoproteus neutrophilus'' is an extreme thermophile, surviving at temperatures up to 95 C. It is an anaerobically growing, sulfur reducing a ...ophilus'' do not have flagella (a characteristic of ''Pyrobaculum''), grow at a lower temperature than most ''Pyrobaculum'', and use only elemental sulfu
    7 KB (947 words) - 13:54, 23 April 2011
  • ...s. Like other endosymbiots, it may add to the fitness of the host organism by supplying nutrients, adding heat resistance or otherwise reduce possibly pr ...ation of oviposition choice of the parasitoid wasp, Encarsia pergandiella, by the endosymbiotic bacterium Cardinium ". ''European Society for Evolutionar
    6 KB (897 words) - 14:23, 24 April 2011
  • [[Category:Pages edited by students of Dr.Ned Walker at Michigan State University]] ...vironment due to the anaerobic conditions of the termite hind guy. As said by Brune and Stingl, it is hypothesized that parabasalids ferment glycosol uni
    4 KB (551 words) - 14:51, 14 August 2013
  • ...cells are non-motile, non-spore forming and rod shape approximately 0.8- 1 by 5-10 μm in size. These cells have round ends and form a collar due to inv ...ster sludge is an anoxic environment. When cultured, ''D. tiedjei'' grows at a temperature range of 20-38 ℃ and a pH range of 6.5 – 7.8. ''Desulfom
    7 KB (941 words) - 03:17, 27 April 2012
  • [[Image:Pyrite.jpg |thumb|left|alt=alt text|Percent pyrite removal by <i>M. sedula</i>(black) and control (white). Clark et. al.]] ...(for example, <i>Thiobacillus ferroxidans</i>), however the process occurs at a slower rate than traditional abiotic removal. [6] <i>M. sedula</i>, being
    8 KB (1,208 words) - 20:32, 23 April 2011
  • ...nia State University and Montana State University. The research was funded by National Science Foundation, Department of Energy, and the NASA Exobiology ...gs in Tibet and Thailand.[1] The importance of this discovery is reflected by 'This is only the third time in the last 100 years that a new group of phot
    11 KB (1,447 words) - 19:58, 26 July 2010
  • ...etyl-CoA, blocking the Krebs cycle and therefore resulting in loss of ATP. By converting arsenate to a non-lethal form, this makes the waters substantial ...sulfate. The strain SLSR-1 showed arsenate reduction was impeded modestly at the highest salinity tested (~330 g/L).
    6 KB (932 words) - 15:07, 22 April 2013
  • ...s enzymes such as chaperone proteins and ATP synthase which are functional at high temperatures instead of denaturing [3]. .... Although the function of the cannulae still remains unknown, the linkage by cannulae therefore could enable cells to exchange metabolites, genetic info
    7 KB (1,047 words) - 19:02, 25 August 2010
  • ...ture range of 30-57°C. Its pH optima is 9.5, with a range of pH 8.5-10.6, at 55°C. Optimal growth occurs with a salt concentration of around 3.3-3.9 M Some of the carbon and energy sources utilized by ''N. thermophilus'' are: tryptone, fructose, ribose, pyruvate, trimethylami
    6 KB (886 words) - 13:55, 24 April 2013
  • ...The ability of this organism to reduce nitrate is of economic significance by eliminating the need for expensive biocides currently used in the treatment ...gellation and exhibit a rapid corkscrew movement. Cells measure 0.5-0.7 µm by 1.7-2.0 µm and can be seen as singles, in pairs, or arranged in long chain
    8 KB (1,148 words) - 22:31, 17 April 2012
  • ...t grows in temperatures between 17 and 55°C, with optimal growth occurring at 50°C. It can also grow over a pH range of 5.5-8.5 with the optimal pH valu ...been investigated as being much more efficient to treat the biomass there by yielding a greater amount of sugars. The only issue is that the ionic liqui
    7 KB (985 words) - 22:12, 25 April 2012
  • ...-containing taxa. Thetree was based on a comparison of sequences that were at least 90 % complete (with regard to E. coli sequence). Bar, 10·0 % sequenc ...n acidic sandy loam Cambisol soil in a protected habitat in Rio de Janeiro state, Brazil (Von der Weid, 2006).
    8 KB (1,161 words) - 19:33, 1 September 2011
  • ...-services.bmb.psu.edu/bryant/lab/Project/Chloroflexi/index.html Penn State University]]] ...nally found in the Nakabusa hot springs in Japan. Ideal conditions to live at are a water temperature ranging from 45 to 55 degrees Celsius and a pH from
    10 KB (1,431 words) - 20:45, 24 April 2011
  • ...00px|thumb|right|Cellular structure of ''Chloroflexus aurantiacus''. Photo by Sylvia Herter.[http://genome.jgi-psf.org/chlau/chlau.home.html]]] ...anism's genome, but of these, 219 possess a function unknown to scientists at this time. 80% of the genome of ''C. aurantiacus'' is known to code for fun
    9 KB (1,239 words) - 18:53, 25 August 2010
  • ...sually mesophiles, but strain SS015 is a thermophile. This ability to live at higher temperatures is incorporated into its nomenclature. ''Geothermobacte ...gative bacterium. It can be cultured in its pure form from a fluid sample by use of serial dilution. This method specifically cultures and identifies st
    7 KB (1,107 words) - 18:57, 25 August 2010
  • ...ta_obscuriglobus_double_membrane-bounded_nuclear_body.png|200px|thumb|left|At the point labeled "G" we can see the thicker inner membrane, and the thinne ...to perform endocytosis on fully folded proteins, it's ability to reproduce by a unique way of budding, and its lack of a cell wall composed of peptidogly
    8 KB (1,293 words) - 17:07, 5 May 2013
  • ...own to be resistant to environments with up to 1200 µg/mL of Cu, surviving by using phosphates to sequester the metal [3]. ...il and groundwater [1]. ''R. pickettii'' is able to exploit this resource by using the hydrocarbons as both a source of carbon and energy. This process
    7 KB (990 words) - 19:03, 25 August 2010
  • ...mes from other cellulosomal clostridia. 31% of the genome is GC and 69% is AT. 57 cellulosomal genes were reported in ''C. cellulovorans''. ''C. cellulov ...s'' do not reduce sulfate and are obligate anaerobes. Cells are 0.7 to 0.9 by 2.5 to 3.5 µm in size and are non-motile rods, though peritrichous flagell
    8 KB (1,028 words) - 19:08, 24 April 2011
  • ...class. It is interesting to note that although oomycetes are considered to by eukaryotes, keystone sequences like the TATA box have been missing in some ...pable or reproduction and completing the cycle. Oospores are characterized by their thick cell walls and are relatively large cells.
    7 KB (1,071 words) - 21:17, 24 April 2011
  • ...e waste in groundwater. It has the ability to reduce uranium and plutonium by reducing soluble forms to insoluble forms [7]. ...re the olny known genes of this bacterium. These genes are usually carried by large conjugative plasmids (50 to 180 kb) that often encode extended-spectr
    8 KB (1,186 words) - 16:46, 22 April 2013
  • ...or of R.E. Hungate. This genus and species name was first proposed in 1974 by Ferry et. al. The cultures are usually yellow in color, circular in shape, ...For instance, it is mostly gram negative, but the multicellular filaments at the ends test as gram positive (Beveridge et. al. 1991). It grows in groups
    9 KB (1,323 words) - 15:12, 2 October 2017
  • ...re|A representation of H. ochraceum's genetic structure. Graphic generated by the Joint Genome Institute.'']] ...om seaweed... Myxobacteria are unicellular bacteria that are characterized by complicated multicellular behaviors, such as feeding, social movement, aggr
    8 KB (1,218 words) - 18:58, 25 August 2010
  • ...b|300px|A photomicrograph of ''F. hibernum'' grown on nutrient-poor medium at 20C for 24hr (McCammon ''et al.'', 1998).]] ...ps ''F. hibernum'' with psychrotrophic microbes, although the temperatures at which growth was possible ranged from -7ºC to 30ºC. This bacterium exhib
    10 KB (1,466 words) - 13:40, 4 June 2014
  • ...e in regards to the oxidation of ferrous iron to ferric iron. This process by bacteria is a relatively novel phenomenon that has only been observed with ...binary mixed culture KoFox grown with ferrous carbonate (''arrow'' points at cell of KoFum)(1).]]
    9 KB (1,292 words) - 18:52, 25 August 2010
  • ...ld be considered a non-halophilic mesophile as it grows almost exclusively at temperatures ranging from 25-37⁰C, NaCl concentrations below 1% and near ...th problems. Along with irritation of the respiratory tract, eyes and skin by contact, BTEX compounds mainly target the nervous system of humans and anim
    11 KB (1,585 words) - 04:38, 27 April 2011
  • [[Category:Pages edited by students at Michigan State University]] ...itrite serve as electron acceptor and anaerobic conditions as investigated by MAR
    5 KB (629 words) - 14:18, 4 October 2017
  • ...cause of the higher recombination rate. The bacteria is usually identified by antibiotic sensitivity testing, serotyping, and bacteriological analysis. ...tive rod. It is oxidase-positive and catalase-positive. The organism moves by polar flagella which are lophotrichous, meaning they have multiple flagella
    8 KB (1,190 words) - 19:01, 25 August 2010
  • ...., 2000). Purification of recombinant proteins in <i>E. coli</i> is aided by targeting the proteins to particular cell locations and studies of bacteria ...anisms for localization. For example, in <i>E. coli</i> FtsZ forms a ring at the midpoint of dividing cells due to the polar localization of an FtsZ pol
    9 KB (1,320 words) - 19:07, 15 July 2011
  • ...jpg|frame|right| A Cryptomonas ovata phytoplankter from a sample collected at Lake Toolik (Alaska, USA). From [http://starcentral.mbl.edu/msr/rawdata/vie ...l lobe of each Cryptomonas, while the striated fibrous root will be joined by five small microtubular roots surrounding the outside before anchoring. [5]
    11 KB (1,578 words) - 18:54, 25 August 2010
  • ...acetogenic bacterium that usually occurs in pairs. Motility is facilitated by one subterminal flagellum, and infrequently exhibits two flagella. ...nlike heteroacetogenic fermentative microorganisms which can produce other by-products along with acetate.
    10 KB (1,383 words) - 17:12, 25 April 2014
  • ...moeba hose and instead utilizes the giant viral machinery that is produced by APMV [http://www.nature.com/nrmicro/journal/v10/n3/full/nrmicro2676-c3.html ...al/v455/n7209/abs/nature07218.html 4] and decreases cell lysis at 24 hours by 13% [http://www.ncbi.nlm.nih.gov/pubmed/22420851 6].
    11 KB (1,650 words) - 13:10, 28 April 2012
  • ...h as mines and polluted soil have been shown to resist those metals, often by converting them to an insoluble form. There are records of resistance of s ...ers are observed in all cases, and the species can be keyed out in the lab by those characteristics.
    9 KB (1,418 words) - 14:08, 24 April 2012
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